 | 2010 |
| 15 |  | Pedro J. Ballester,
John B. O. Mitchell:
A machine learning approach to predicting protein-ligand binding affinity with applications to molecular docking.
Bioinformatics 26(9): 1169-1175 (2010) |
| 14 |  | Daniel E. Almonacid,
Emmanuel R. Yera,
John B. O. Mitchell,
Patricia C. Babbitt:
Quantitative Comparison of Catalytic Mechanisms and Overall Reactions in Convergently Evolved Enzymes: Implications for Classification of Enzyme Function.
PLoS Computational Biology 6(3): (2010) |
| 2007 |
| 13 |  | Chrysi Konstantinou-Kirtay,
John B. O. Mitchell,
James A. Lumley:
Scoring functions and enrichment: a case study on Hsp90.
BMC Bioinformatics 8: (2007) |
| 12 |  | Gemma L. Holliday,
Daniel E. Almonacid,
Gail J. Bartlett,
Noel M. O'Boyle,
James W. Torrance,
Peter Murray-Rust,
John B. O. Mitchell,
Janet M. Thornton:
MACiE (Mechanism, Annotation and Classification in Enzymes): novel tools for searching catalytic mechanisms.
Nucleic Acids Research 35(Database-Issue): 515-520 (2007) |
| 2006 |
| 11 |  | Edward O. Cannon,
John B. O. Mitchell:
Classifying the World Anti-Doping Agency's 2005 Prohibited List Using the Chemistry Development Kit Fingerprint.
CompLife 2006: 173-182 |
| 2005 |
| 10 |  | Peter Murray-Rust,
John B. O. Mitchell,
Henry S. Rzepa:
Chemistry in Bioinformatics.
BMC Bioinformatics 6: 141 (2005) |
| 9 |  | Peter Murray-Rust,
John B. O. Mitchell,
Henry S. Rzepa:
Communication and re-use of chemical information in bioscience.
BMC Bioinformatics 6: 180 (2005) |
| 8 |  | Gemma L. Holliday,
Gail J. Bartlett,
Daniel E. Almonacid,
Noel M. O'Boyle,
Peter Murray-Rust,
Janet M. Thornton,
John B. O. Mitchell:
MACiE: a database of enzyme reaction mechanisms.
Bioinformatics 21(23): 4315-4316 (2005) |
| 2003 |
| 7 |  | Dushyanthan Puvanendrampillai,
John B. O. Mitchell:
Protein Ligand Database (PLD): additional understanding of the nature and specificity of protein-ligand complexes.
Bioinformatics 19(14): 1856-1857 (2003) |
| 2001 |
| 6 |  | John B. O. Mitchell:
The Relationship between the Sequence Identities of Alpha Helical Proteins in the PDB and the Molecular Similarities of Their Ligands.
Journal of Chemical Information and Computer Sciences 41(6): 1617-1622 (2001) |
| 5 |  | Irene Nobeli,
John B. O. Mitchell,
Alexander Alex,
Janet M. Thornton:
Evaluation of a knowledge-based potential of mean force for scoring docked protein-ligand complexes.
Journal of Computational Chemistry 22(7): 673-688 (2001) |
| 1999 |
| 4 |  | John B. O. Mitchell,
Alexander Alex,
Michael Snarey:
SATIS: Atom Typing from Chemical Connectivity.
Journal of Chemical Information and Computer Sciences 39(4): 751-757 (1999) |
| 3 |  | John B. O. Mitchell,
Roman A. Laskowski,
Alexander Alex,
Janet M. Thornton:
BLEEP - potential of mean force describing protein-ligand interactions: I. Generating potential.
Journal of Computational Chemistry 20(11): 1165-1176 (1999) |
| 2 |  | John B. O. Mitchell,
Roman A. Laskowski,
Alexander Alex,
Mark J. Forster,
Janet M. Thornton:
BLEEP - potential of mean force describing protein-ligand interactions: II. Calculation of binding energies and comparison with experimental data.
Journal of Computational Chemistry 20(11): 1177-1185 (1999) |
| 1994 |
| 1 |  | Richard J. Wheatley,
John B. O. Mitchell:
Gaussian Multipoles in Practice: Electrostatic Energeis for Intermolecular Potentials.
Journal of Computational Chemistry 15(11): 1187-1198 (1994) |