 | 2011 |
| 10 |  | Hiroshi Masuya,
Yuko Makita,
Norio Kobayashi,
Koro Nishikata,
Yuko Yoshida,
Yoshiki Mochizuki,
Koji Doi,
Terue Takatsuki,
Kazunori Waki,
Nobuhiko Tanaka,
Manabu Ishii,
Akihiro Matsushima,
Satoshi Takahashi,
Atsushi Hijikata,
Kouji Kozaki,
Teiichi Furuichi,
Hideya Kawaji,
Shigeharu Wakana,
Yukio Nakamura,
Atsushi Yoshiki,
Takehide Murata,
Kaoru Fukami-Kobayashi,
S. Sujatha Mohan,
Osamu Ohara,
Yoshihide Hayashizaki,
Riichiro Mizoguchi,
Yuichi Obata,
Tetsuro Toyoda:
The RIKEN integrated database of mammals.
Nucleic Acids Research 39(Database-Issue): 861-870 (2011) |
| 2009 |
| 9 |  | Yuko Yoshida,
Yuko Makita,
Naohiko Heida,
Satomi Asano,
Akihiro Matsushima,
Manabu Ishii,
Yoshiki Mochizuki,
Hiroshi Masuya,
Shigeharu Wakana,
Norio Kobayashi,
Tetsuro Toyoda:
PosMed (Positional Medline): prioritizing genes with an artificial neural network comprising medical documents to accelerate positional cloning.
Nucleic Acids Research 37(Web-Server-Issue): 147-152 (2009) |
| 8 |  | Akihiro Matsushima,
Norio Kobayashi,
Yoshiki Mochizuki,
Manabu Ishii,
Shuji Kawaguchi,
Takaho A. Endo,
Ryo Umetsu,
Yuko Makita,
Tetsuro Toyoda:
OmicBrowse: a Flash-based high-performance graphics interface for genomic resources.
Nucleic Acids Research 37(Web-Server-Issue): 57-62 (2009) |
| 2008 |
| 7 |  | Nicolas Sierro,
Yuko Makita,
Michiel J. L. de Hoon,
Kenta Nakai:
DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information.
Nucleic Acids Research 36(Database-Issue): 93-96 (2008) |
| 2007 |
| 6 |  | Yuko Makita,
Michiel J. L. de Hoon,
Antoine Danchin:
Hon-yaku: a biology-driven Bayesian methodology for identifying translation initiation sites in prokaryotes.
BMC Bioinformatics 8: (2007) |
| 5 |  | Toshiyuki Okumura,
Hiroki Makiguchi,
Yuko Makita,
Riu Yamashita,
Kenta Nakai:
Melina II: a web tool for comparisons among several predictive algorithms to find potential motifs from promoter regions.
Nucleic Acids Research 35(Web-Server-Issue): 227-231 (2007) |
| 2005 |
| 4 |  | Yuko Makita,
Michiel J. L. de Hoon,
Naotake Ogasawara,
Satoru Miyano,
Kenta Nakai:
Bayesian Joint Prediction of Associated Transcription Factors in Bacillus subtilis.
Pacific Symposium on Biocomputing 2005 |
| 3 |  | Michiel J. L. de Hoon,
Yuko Makita,
Kenta Nakai,
Satoru Miyano:
Prediction of Transcriptional Terminators in Bacillus subtilis and Related Species.
PLoS Computational Biology 1(3): (2005) |
| 2004 |
| 2 |  | Michiel J. L. de Hoon,
Yuko Makita,
Seiya Imoto,
Kazuo Kobayashi,
Naotake Ogasawara,
Kenta Nakai,
Satoru Miyano:
Predicting gene regulation by sigma factors in Bacillus subtilis from genome-wide data.
ISMB/ECCB (Supplement of Bioinformatics) 2004: 101-108 |
| 1 |  | Yuko Makita,
Mitsuteru Nakao,
Naotake Ogasawara,
Kenta Nakai:
BTBS: database of transcriptional regulation in Bacillus subtilis and its contribution to comparative genomics.
Nucleic Acids Research 32(Database-Issue): 75-77 (2004) |