 | 2011 |
| 9 |  | Filip Bielejec,
Andrew Rambaut,
Marc A. Suchard,
Philippe Lemey:
SPREAD: spatial phylogenetic reconstruction of evolutionary dynamics.
Bioinformatics 27(20): 2910-2912 (2011) |
| 2010 |
| 8 |  | Kristof Theys,
Koen Deforche,
Gertjan Beheydt,
Yves Moreau,
Kristel Van Laethem,
Philippe Lemey,
Ricardo Camacho,
Soo-Yon Rhee,
Robert W. Shafer,
Eric Van Wijngaerden,
Anne-Mieke Vandamme:
Estimating the individualized HIV-1 genetic barrier to resistance using a nelfinavir fitness landscape.
BMC Bioinformatics 11: 409 (2010) |
| 7 |  | Darren P. Martin,
Philippe Lemey,
Martin Lott,
Vincent Moulton,
David Posada,
Pierre Lefeuvre:
RDP3: a flexible and fast computer program for analyzing recombination.
Bioinformatics 26(19): 2462-2463 (2010) |
| 2009 |
| 6 |  | Philippe Lemey,
Martin Lott,
Darren P. Martin,
Vincent Moulton:
Identifying recombinants in human and primate immunodeficiency virus sequence alignments using quartet scanning.
BMC Bioinformatics 10: (2009) |
| 5 |  | Philippe Lemey,
Andrew Rambaut,
Alexei J. Drummond,
Marc A. Suchard:
Bayesian Phylogeography Finds Its Roots.
PLoS Computational Biology 5(9): (2009) |
| 2008 |
| 4 |  | Koen Deforche,
Ricardo Camacho,
Kristel Van Laethem,
Philippe Lemey,
Andrew Rambaut,
Yves Moreau,
Anne-Mieke Vandamme:
Estimation of an in vivo fitness landscape experienced by HIV-1 under drug selective pressure useful for prediction of drug resistance evolution during treatment.
Bioinformatics 24(1): 34-41 (2008) |
| 2007 |
| 3 |  | Koen Deforche,
Ricardo Camacho,
Kristel Van Laethem,
Beth Shapiro,
Yves Moreau,
Andrew Rambaut,
Anne-Mieke Vandamme,
Philippe Lemey:
Estimating the Relative Contribution of dNTP Pool Imbalance and APOBEC3G/3F Editing to HIV Evolution In Vivo.
Journal of Computational Biology 14(8): 1105-1114 (2007) |
| 2 |  | Philippe Lemey,
Sergei L. Kosakovsky Pond,
Alexei J. Drummond,
Oliver G. Pybus,
Beth Shapiro,
Helena Barroso,
Nuno Taveira,
Andrew Rambaut:
Synonymous Substitution Rates Predict HIV Disease Progression as a Result of Underlying Replication Dynamics.
PLoS Computational Biology 3(2): (2007) |
| 2005 |
| 1 |  | Dimitris Paraskevis,
Koen Deforche,
Philippe Lemey,
G. Magiorkinis,
A. Hatzakis,
Anne-Mieke Vandamme:
SlidingBayes: exploring recombination using a sliding window approach based on Bayesian phylogenetic inference.
Bioinformatics 21(7): 1274-1275 (2005) |