Vamsi Kundeti

	2012
25		Vamsi Kundeti, Sanguthevar Rajasekaran: Self assembly of rectangular shapes on concentration programming and probabilistic tile assembly models. Natural Computing 11(2): 199-207 (2012)
	2011
24		Sanguthevar Rajasekaran, Hieu Dinh, Vamsi Kundeti: Workshop: Efficient sequential and parallel algorithms for sequence assembly. ICCABS 2011: 274
23		Hieu Dinh, Sanguthevar Rajasekaran, Vamsi Kundeti: PMS5: an efficient exact algorithm for the (l, d)-motif finding problem. BMC Bioinformatics 12: 410 (2011)
22		Vamsi Kundeti, Sanguthevar Rajasekaran: Efficient out-of-core sorting algorithms for the Parallel Disks Model. J. Parallel Distrib. Comput. 71(11): 1427-1433 (2011)
21		Vamsi Kundeti, Sanguthevar Rajasekaran: Efficient algorithms for self assembling non-rectangular nano structures. Natural Computing 10(1): 583-594 (2011)
	2010
20		Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh: On the border length minimization problem (BLMP) on a square array. BCB 2010: 112-119
19		Vamsi Kundeti, Sanguthevar Rajasekaran, Dinh Heiu: An Efficient Algorithm for Chinese Postman Walk on Bi-directed de Bruijn Graphs. COCOA (1) 2010: 184-196
18		Vamsi Kundeti, Sanguthevar Rajasekaran: Randomized Self Assembly of Rectangular Nano Structures. DNA 2010: 100-111
17		Jay Vyas, Ronald J. Nowling, Thomas Meusburger, David P. Sargeant, Krishna Kadaveru, Michael R. Gryk, Vamsi Kundeti, Sanguthevar Rajasekaran, Martin R. Schiller: MimoSA: a system for minimotif annotation. BMC Bioinformatics 11: 328 (2010)
16		Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh, Matthew Vaughn, Vishal Thapar: Efficient parallel and out of core algorithms for constructing large bi-directed de Bruijn graphs. BMC Bioinformatics 11: 560 (2010)
15		Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh: Efficient Parallel and Out of Core Algorithms for Constructing Large Bi-directed de Bruijn Graphs CoRR abs/1003.1940: (2010)
14		Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh: On the Border Length Minimization Problem (BLMP) on a Square Array CoRR abs/1003.2839: (2010)
13		Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh: An Efficient Algorithm For Chinese Postman Walk on Bi-directed de Bruijn Graphs CoRR abs/1006.4828: (2010)
12		Vamsi Kundeti, Sanguthevar Rajasekaran: On the Hardness of the Border Length Minimization Problem on a Rectangular Array. Int. J. Found. Comput. Sci. 21(6): 1089-1100 (2010)
11		Vamsi Kundeti, Sanguthevar Rajasekaran: Fast algorithms for placing large entries along the diagonal of a sparse matrix. J. Computational Applied Mathematics 235(3): 756-764 (2010)
	2009
10		Vamsi Kundeti, Sanguthevar Rajasekaran: On the Hardness of the Border Length Minimization Problem. BIBE 2009: 248-253
9		Vamsi Kundeti, Sanguthevar Rajasekaran, R. Birge: Generalized algorithms for generating balanced modulation codes in protein-based volumetric memories. IEEE Congress on Evolutionary Computation 2009: 1585-1590
8		Vamsi Kundeti, Sanguthevar Rajasekaran: Efficient Algorithms for Self Assembling Triangular and Other Nano Structures. ISBRA 2009: 148-158
7		Vamsi Kundeti: A Simplified Proof For The Application Of Freivalds' Technique to Verify Matrix Multiplication CoRR abs/0912.3925: (2009)
6		Sanguthevar Rajasekaran, Vamsi Kundeti: Spectrum Based Techniques for Graph Isomorphism. Int. J. Found. Comput. Sci. 20(3): 479-499 (2009)
5		Sanguthevar Rajasekaran, Sudha Balla, Patrick Gradie, Michael R. Gryk, Krishna Kadaveru, Vamsi Kundeti, Mark W. Maciejewski, Tian Mi, Nicholas Rubino, Jay Vyas, Martin R. Schiller: Minimotif miner 2nd release: a database and web system for motif search. Nucleic Acids Research 37(Database-Issue): 185-190 (2009)
	2008
4		Vamsi Kundeti, Yunsi Fei, Sanguthevar Rajasekaran: An efficient digital circuit for implementing Sequence Alignment algorithm in an extended processor. ASAP 2008: 156-161
3		Vamsi Kundeti, Sanguthevar Rajasekaran: A local structural alignment algorithm with Variable Length Alignment Fragment Pairs. BIBE 2008: 1-7
2		Vamsi Kundeti, Sanguthevar Rajasekaran: Efficient PDM Sorting Algorithms. HiPC 2008: 97-107
1		Vamsi Kundeti, Sanguthevar Rajasekaran: Extending the Four Russian Algorithm to Compute the Edit Script in Linear Space. ICCS (1) 2008: 893-902

Coauthor Index

1	Sudha Balla	[5]
2	R. Birge	[9]
3	Hieu Dinh	[13] [14] [15] [16] [20] [23] [24]
4	Yunsi Fei	[4]
5	Patrick Gradie	[5]
6	Michael R. Gryk	[5] [17]
7	Dinh Heiu	[19]
8	Krishna Kadaveru	[5] [17]
9	Mark W. Maciejewski	[5]
10	Thomas Meusburger	[17]
11	Tian Mi	[5]
12	Ronald J. Nowling	[17]
13	Sanguthevar Rajasekaran	[1] [2] [3] [4] [5] [6] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25]
14	Nicholas Rubino	[5]
15	David P. Sargeant	[17]
16	Martin R. Schiller	[5] [17]
17	Vishal Thapar	[16]
18	Matthew Vaughn	[16]
19	Jay Vyas	[5] [17]

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