Sudhir Kumar

	2012
21		Ying-Xin Li, Shuiwang Ji, Sudhir Kumar, Jieping Ye, Zhi-Hua Zhou: Drosophila Gene Expression Pattern Annotation through Multi-Instance Multi-Label Learning. IEEE/ACM Trans. Comput. Biology Bioinform. 9(1): 98-112 (2012)
	2011
20		Sudhir Kumar, S. Blair Hedges: TimeTree2: species divergence times on the iPhone. Bioinformatics 27(14): 2023-2024 (2011)
19		Sudhir Kumar, Charlotte Konikoff, Bernard Van Emden, Christopher Busick, Kailah T. Davis, Shuiwang Ji, Lin-Wei Wu, Hector Ramos, Thomas Brody, Sethuraman Panchanathan, Jieping Ye, Timothy L. Karr, Kristyn Gerold, Michael McCutchan, Stuart J. Newfeld: FlyExpress: visual mining of spatiotemporal patterns for genes and publications in Drosophila embryogenesis. Bioinformatics 27(23): 3319-3320 (2011)
	2009
18		Ying-Xin Li, Shuiwang Ji, Sudhir Kumar, Jieping Ye, Zhi-Hua Zhou: DrosophilaGene Expression Pattern Annotation through Multi-Instance Multi-Label Learning. IJCAI 2009: 1445-1450
17		Shuiwang Ji, Lei Yuan, Ying-Xin Li, Zhi-Hua Zhou, Sudhir Kumar, Jieping Ye: Drosophila gene expression pattern annotation using sparse features and term-term interactions. KDD 2009: 407-416
16		Jieping Ye, Ravi Janardan, Sudhir Kumar: Biological Image Analysis via Matrix Approximation. Encyclopedia of Data Warehousing and Mining 2009: 166-170
15		Shuiwang Ji, Ying-Xin Li, Zhi-Hua Zhou, Sudhir Kumar, Jieping Ye: A bag-of-words approach for Drosophila gene expression pattern annotation. BMC Bioinformatics 10: (2009)
14		Antonio Marco, Charlotte Konikoff, Timothy L. Karr, Sudhir Kumar: Relationship between gene co-expression and sharing of transcription factor binding sites in Drosophila melanogaster. Bioinformatics 25(19): 2473-2477 (2009)
13		Sudhir Kumar, Pradeep Kumar, H. S. Shan, Rajesh Kumar Bhushan: Parametric optimisation of percent deviation for casting dimensions in VAEPC process by using Taguchi technique. IJMR 4(4): 395-409 (2009)
	2008
12		Shuiwang Ji, Liang Sun, Rong Jin, Sudhir Kumar, Jieping Ye: Automated annotation of Drosophila gene expression patterns using a controlled vocabulary. Bioinformatics 24(17): 1881-1888 (2008)
11		Sudhir Kumar, Masatoshi Nei, Joel Dudley, Koichiro Tamura: MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences. Briefings in Bioinformatics 9(4): 299-306 (2008)
10		Jieping Ye, Jianhui Chen, Ravi Janardan, Sudhir Kumar: Developmental stage annotation of Drosophila gene expression pattern images via an entire solution path for LDA. TKDD 2(1): (2008)
	2007
9		Charles J. Colbourn, Sudhir Kumar: Lower bounds on multiple sequence alignment using exact 3-way alignment. BMC Bioinformatics 8: (2007)
8		Sudhir Kumar, Joel Dudley: Bioinformatics software for biologists in the genomics era. Bioinformatics 23(14): 1713-1717 (2007)
	2006
7		S. Blair Hedges, Joel Dudley, Sudhir Kumar: TimeTree: a public knowledge-base of divergence times among organisms. Bioinformatics 22(23): 2971-2972 (2006)
	2004
6		Rajalakshmi Gurunathan, Bernard Van Emden, Sethuraman Panchanathan, Sudhir Kumar: Identifying spatially similar gene expression patterns in early stage fruit fly embryo images: binary feature versus invariant moment digital representations. BMC Bioinformatics 5: 202 (2004)
5		Sudhir Kumar, Koichiro Tamura, Masatoshi Nei: MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment. Briefings in Bioinformatics 5(2): 150-163 (2004)
	2001
4		Sudhir Kumar, Koichiro Tamura, Ingrid B. Jakobsen, Masatoshi Nei: MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 17(12): 1244-1245 (2001)
	2000
3		Paul Walton Purdom Jr., Phillip G. Bradford, Koichiro Tamura, Sudhir Kumar: Single column discrepancy and dynamic max-mini optimizations for quickly finding the most parsimonious evolutionary trees. Bioinformatics 16(2): 140-151 (2000)
	1998
2		S. Srivastava, S. C. Bose, B. P. Mathur, Arti Noor, Raj Singh, A. S. Mandal, K. Prabhakaran, A. Karmakar, Chandra Shekhar, Sudhir Kumar, Amit K. Agarwal: Evolution of Architectural Concepts and Design Methods of Microprocessors. VLSI Design 1998: 312-317
	1994
1		Sudhir Kumar, Koichiro Tamura, Masatoshi Nei: MEGA: Molecular Evolutionary Genetics Analysis software for microcomputers. Computer Applications in the Biosciences 10(2): 189-191 (1994)

Coauthor Index

1	Amit K. Agarwal	[2]
2	Rajesh Kumar Bhushan	[13]
3	S. C. Bose	[2]
4	Phillip G. Bradford	[3]
5	Thomas Brody	[19]
6	Christopher Busick	[19]
7	Jianhui Chen	[10]
8	Charles J. Colbourn	[9]
9	Kailah T. Davis	[19]
10	Joel Dudley	[7] [8] [11]
11	Bernard Van Emden	[6] [19]
12	Kristyn Gerold	[19]
13	Rajalakshmi Gurunathan	[6]
14	S. Blair Hedges	[7] [20]
15	Ingrid B. Jakobsen	[4]
16	Ravi Janardan	[10] [16]
17	Shuiwang Ji	[12] [15] [17] [18] [19] [21]
18	Rong Jin	[12]
19	A. Karmakar	[2]
20	Timothy L. Karr	[14] [19]
21	Charlotte Konikoff	[14] [19]
22	Pradeep Kumar	[13]
23	Ying-Xin Li	[15] [17] [18] [21]
24	A. S. Mandal	[2]
25	Antonio Marco	[14]
26	B. P. Mathur	[2]
27	Michael McCutchan	[19]
28	Masatoshi Nei	[1] [4] [5] [11]
29	Stuart J. Newfeld	[19]
30	Arti Noor	[2]
31	Sethuraman Panchanathan	[6] [19]
32	K. Prabhakaran	[2]
33	Paul Walton Purdom Jr.	[3]
34	Hector Ramos	[19]
35	H. S. Shan	[13]
36	Chandra Shekhar	[2]
37	Raj Singh	[2]
38	S. Srivastava	[2]
39	Liang Sun	[12]
40	Koichiro Tamura	[1] [3] [4] [5] [11]
41	Lin-Wei Wu	[19]
42	Jieping Ye	[10] [12] [15] [16] [17] [18] [19] [21]
43	Lei Yuan	[17]
44	Zhi-Hua Zhou	[15] [17] [18] [21]

Colors in the list of coauthors

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