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| 2012 | ||
|---|---|---|
| 36 | Mehmet Koyutürk: Using Protein Interaction Networks to Understand Complex Diseases. IEEE Computer 45(3): 31-38 (2012) | |
| 2011 | ||
| 35 | Gürkan Bebek, Mehmet Koyutürk, Mark R. Chance, Nathan D. Price: Session Introduction. Pacific Symposium on Biocomputing 2011: 1-3 | |
| 34 | Yu Liu, Sanjay R. Patel, Rod K. Nibbe, Sean Maxwell, Salim A. Chowdhury, Mehmet Koyutürk, Xiaofeng Zhu, Emma Larkin, Sarah Buxbaum, Naresh Punjabi, Sina Gharib, Susan Redline, Mark R. Chance: Systems Biology Analyses of Gene Expression and Genome Wide Association Study Data in Obstructive Sleep Apnea. Pacific Symposium on Biocomputing 2011: 14-25 | |
| 33 | Sinan Erten, Gürkan Bebek, Mehmet Koyutürk: Disease Gene Prioritization Based on Topological Similarity in Protein-Protein Interaction Networks. RECOMB 2011: 54-68 | |
| 32 | Matthew Ruffalo, Thomas LaFramboise, Mehmet Koyutürk: Comparative analysis of algorithms for next-generation sequencing read alignment. Bioinformatics 27(20): 2790-2796 (2011) | |
| 2010 | ||
| 31 | Sinan Erten, Mehmet Koyutürk: Role of Centrality in Network-Based Prioritization of Disease Genes. EvoBIO 2010: 13-25 | |
| 30 | Gökhan Yavas, Mehmet Koyutürk, Thomas LaFramboise: Optimization Algorithms for Identification and Genotyping of Copy Number Polymorphisms in Human Populations. PRIB 2010: 74-85 | |
| 29 | Salim A. Chowdhury, Mehmet Koyutürk: Identification of Coordinately Dysregulated Subnetworks in Complex Phenotypes. Pacific Symposium on Biocomputing 2010: 133-144 | |
| 28 | Gökhan Yavas, Mehmet Koyutürk, Z. Meral Özsoyoglu, Meetha P. Gould, Thomas LaFramboise: COKGEN: A Software for the Identification of Rare Copy Number Variation from SNP Microarrays. Pacific Symposium on Biocomputing 2010: 371-382 | |
| 27 | Salim A. Chowdhury, Rod K. Nibbe, Mark R. Chance, Mehmet Koyutürk: Subnetwork State Functions Define Dysregulated Subnetworks in Cancer. RECOMB 2010: 80-95 | |
| 26 | Jayesh Pandey, Mehmet Koyutürk, Ananth Grama: Functional characterization and topological modularity of molecular interaction networks. BMC Bioinformatics 11(S-1): 35 (2010) | |
| 25 | Rod K. Nibbe, Mehmet Koyutürk, Mark R. Chance: An Integrative -omics Approach to Identify Functional Sub-Networks in Human Colorectal Cancer. PLoS Computational Biology 6(1): (2010) | |
| 24 | Murat Manguoglu, Mehmet Koyutürk, Ahmed H. Sameh, Ananth Grama: Weighted Matrix Ordering and Parallel Banded Preconditioners for Iterative Linear System Solvers. SIAM J. Scientific Computing 32(3): 1201-1216 (2010) | |
| 2009 | ||
| 23 | Sinan Erten, Xin Li, Gürkan Bebek, Jing Li, Mehmet Koyutürk: Phylogenetic analysis of modularity in protein interaction networks. BMC Bioinformatics 10: 333 (2009) | |
| 22 | Bogdan Carbunar, Murali Krishna Ramanathan, Mehmet Koyutürk, Suresh Jagannathan, Ananth Grama: Efficient tag detection in RFID systems. J. Parallel Distrib. Comput. 69(2): 180-196 (2009) | |
| 2008 | ||
| 21 | Jayesh Pandey, Mehmet Koyutürk, Shankar Subramaniam, Ananth Grama: Functional coherence in domain interaction networks. ECCB 2008: 28-34 | |
| 20 | Jayesh Pandey, Mehmet Koyutürk, Wojciech Szpankowski, Ananth Grama: Annotating Pathways of Interaction Networks. Pacific Symposium on Biocomputing 2008: 153-165 | |
| 19 | Murali Krishna Ramanathan, Mehmet Koyutürk, Ananth Grama, Suresh Jagannathan: PHALANX: a graph-theoretic framework for test case prioritization. SAC 2008: 667-673 | |
| 18 | Ronaldo A. Ferreira, Mehmet Koyutürk, Suresh Jagannathan, Ananth Grama: Semantic indexing in structured peer-to-peer networks. J. Parallel Distrib. Comput. 68(1): 64-77 (2008) | |
| 2007 | ||
| 17 | Jayesh Pandey, Mehmet Koyutürk, Yohan Kim, Wojciech Szpankowski, Shankar Subramaniam, Ananth Grama: Functional annotation of regulatory pathways. ISMB/ECCB (Supplement of Bioinformatics) 2007: 377-386 | |
| 16 | Mehmet Koyutürk, Wojciech Szpankowski, Ananth Grama: Assessing Significance of Connectivity and Conservation in Protein Interaction Networks. Journal of Computational Biology 14(6): 747-764 (2007) | |
| 2006 | ||
| 15 | Mehmet Koyutürk, Ananth Grama, Wojciech Szpankowski: Assessing Significance of Connectivity and Conservation in Protein Interaction Networks. RECOMB 2006: 45-59 | |
| 14 | Mehmet Koyutürk, Ananth Grama, Naren Ramakrishnan: Nonorthogonal decomposition of binary matrices for bounded-error data compression and analysis. ACM Trans. Math. Softw. 32(1): 33-69 (2006) | |
| 13 | Jie Chi, Mehmet Koyutürk, Ananth Grama: CONQUEST: A Coarse-Grained Algorithm for Constructing Summaries of Distributed Discrete Datasets. Algorithmica 45(3): 377-401 (2006) | |
| 12 | Yohan Kim, Mehmet Koyutürk, Umut Topkara, Ananth Grama, Shankar Subramaniam: Inferring functional information from domain co-evolution. Bioinformatics 22(1): 40-49 (2006) | |
| 11 | Mehmet Koyutürk, Yohan Kim, Umut Topkara, Shankar Subramaniam, Wojciech Szpankowski, Ananth Grama: Pairwise Alignment of Protein Interaction Networks. Journal of Computational Biology 13(2): 182-199 (2006) | |
| 10 | Mehmet Koyutürk, Yohan Kim, Shankar Subramaniam, Wojciech Szpankowski, Ananth Grama: Detecting Conserved Interaction Patterns in Biological Networks. Journal of Computational Biology 13(7): 1299-1322 (2006) | |
| 2005 | ||
| 9 | Mehmet Koyutürk, Ananth Grama, Wojciech Szpankowski: Pairwise Local Alignment of Protein Interaction Networks Guided by Models of Evolution. RECOMB 2005: 48-65 | |
| 8 | Mehmet Koyutürk, Ananth Grama, Naren Ramakrishnan: Compression, Clustering, and Pattern Discovery in Very High-Dimensional Discrete-Attribute Data Sets. IEEE Trans. Knowl. Data Eng. 17(4): 447-461 (2005) | |
| 7 | Mehmet Koyutürk, Cevdet Aykanat: Iterative-improvement-based declustering heuristics for multi-disk databases. Inf. Syst. 30(1): 47-70 (2005) | |
| 2004 | ||
| 6 | Mehmet Koyutürk, Wojciech Szpankowski, Ananth Grama: Biclustering Gene-Feature Matrices for Statistically Significant Dense Patterns. CSB 2004: 480-484 | |
| 5 | Mehmet Koyutürk, Ananth Grama, Wojciech Szpankowski: An efficient algorithm for detecting frequent subgraphs in biological networks. ISMB/ECCB (Supplement of Bioinformatics) 2004: 200-207 | |
| 4 | Jie Chi, Mehmet Koyutürk, Ananth Grama: Conquest: A Distributed Tool for Constructing Summaries of High-Dimensional Discrete Attribute Data Sets. SDM 2004 | |
| 2003 | ||
| 3 | Mehmet Koyutürk, Ananth Grama, Wojciech Szpankowski: Algorithms for Bounded-Error Correlation of High Dimensional Data in Microarray Experiments. CSB 2003: 575-580 | |
| 2 | Mehmet Koyutürk, Ananth Grama: PROXIMUS: a framework for analyzing very high dimensional discrete-attributed datasets. KDD 2003: 147-156 | |
| 2002 | ||
| 1 | Mehmet Koyutürk, Ananth Grama, Naren Ramakrishnan: Algebraic Techniques for Analysis of Large Discrete-Valued Datasets. PKDD 2002: 311-324 | |
Colors in the list of coauthors
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