 | 2011 |
| 11 |  | Marie-Nathalie Contou-Carrere,
Vassilios Sotiropoulos,
Yiannis N. Kaznessis,
Prodromos Daoutidis:
Model reduction of multi-scale chemical Langevin equations.
Systems & Control Letters 60(1): 75-86 (2011) |
| 2010 |
| 10 |  | Emma M. B. Weeding,
Jason Houle,
Yiannis N. Kaznessis:
SynBioSS designer: a web-based tool for the automated generation of kinetic models for synthetic biological constructs.
Briefings in Bioinformatics 11(4): 394-402 (2010) |
| 2009 |
| 9 |  | Vassilios Sotiropoulos,
Marie-Nathalie Contou-Carrere,
Prodromos Daoutidis,
Yiannis N. Kaznessis:
Model Reduction of Multiscale Chemical Langevin Equations: A Numerical Case Study.
IEEE/ACM Trans. Comput. Biology Bioinform. 6(3): 470-482 (2009) |
| 8 |  | Dan S. Bolintineanu,
Abdallah Sayyed-Ahmad,
H. Ted Davis,
Yiannis N. Kaznessis:
Poisson-Nernst-Planck Models of Nonequilibrium Ion Electrodiffusion through a Protegrin Transmembrane Pore.
PLoS Computational Biology 5(1): (2009) |
| 2008 |
| 7 |  | Yiannis N. Kaznessis,
Vassilios Sotiropoulos,
Anthony D. Hill,
Jonathan R. Tomshine,
Katherine Volzing,
John Barrett,
Emma M. B. Weeding:
Multiscale Models for Synthetic Biology.
BIOCOMP 2008: 835-837 |
| 6 |  | Anthony D. Hill,
Jonathan R. Tomshine,
Emma M. B. Weeding,
Vassilios Sotiropoulos,
Yiannis N. Kaznessis:
SynBioSS: the synthetic biology modeling suite.
Bioinformatics 24(21): 2551-2553 (2008) |
| 2006 |
| 5 |  | Howard Salis,
Vassilios Sotiropoulos,
Yiannis N. Kaznessis:
Multiscale Hy3S: Hybrid stochastic simulation for supercomputers.
BMC Bioinformatics 7: 93 (2006) |
| 4 |  | Yuhua Duan,
Boojala V. B. Reddy,
Yiannis N. Kaznessis:
Residue Conservation Information for Generating near-native Structures in Protein-protein Docking.
J. Bioinformatics and Computational Biology 4(4): 793-806 (2006) |
| 2005 |
| 3 |  | Howard Salis,
Yiannis N. Kaznessis:
Numerical simulation of stochastic gene circuits.
Computers & Chemical Engineering 29(3): 577-588 (2005) |
| 2 |  | Boojala V. B. Reddy,
Yiannis N. Kaznessis:
A Quantitative Analysis of Interfacial Amino Acid Conservation in Protein-protein Hetero Complexes.
J. Bioinformatics and Computational Biology 3(5): 1137-1150 (2005) |
| 2001 |
| 1 |  | Yiannis N. Kaznessis,
Mark E. Snow,
C. John Blankley:
Prediction of blood-brain partitioning using Monte Carlo simulations of molecules in water.
Journal of Computer-Aided Molecular Design 15(8): 697-708 (2001) |