Minoru Kanehisa

	2012
70		Minoru Kanehisa, Susumu Goto, Yoko Sato, Miho Furumichi, Mao Tanabe: KEGG for integration and interpretation of large-scale molecular data sets. Nucleic Acids Research 40(Database-Issue): 109-114 (2012)
	2011
69		Nozomu Sakurai, Takeshi Ara, Yoshiyuki Ogata, Ryosuke Sano, Takashi Ohno, Kenjiro Sugiyama, Atsushi Hiruta, Kiyoshi Yamazaki, Kentaro Yano, Koh Aoki, Asaph Aharoni, Kazuki Hamada, Koji Yokoyama, Shingo Kawamura, Hirofumi Otsuka, Toshiaki Tokimatsu, Minoru Kanehisa, Hideyuki Suzuki, Kazuki Saito, Daisuke Shibata: KaPPA-View4: a metabolic pathway database for representation and analysis of correlation networks of gene co-expression and metabolite co-accumulation and omics data. Nucleic Acids Research 39(Database-Issue): 677-684 (2011)
68		Takuji Yamada, Ivica Letunic, Shujiro Okuda, Minoru Kanehisa, Peer Bork: iPath2.0: interactive pathway explorer. Nucleic Acids Research 39(Web-Server-Issue): 412-415 (2011)
	2010
67		Yoshihiro Yamanishi, Masaaki Kotera, Minoru Kanehisa, Susumu Goto: Drug-target interaction prediction from chemical, genomic and pharmacological data in an integrated framework. Bioinformatics [ISMB] 26(12): 246-254 (2010)
66		Minoru Kanehisa, Susumu Goto, Miho Furumichi, Mao Tanabe, Mika Hirakawa: KEGG for representation and analysis of molecular networks involving diseases and drugs. Nucleic Acids Research 38(Database-Issue): 355-360 (2010)
65		Yuki Moriya, Daichi Shigemizu, Masahiro Hattori, Toshiaki Tokimatsu, Masaaki Kotera, Susumu Goto, Minoru Kanehisa: PathPred: an enzyme-catalyzed metabolic pathway prediction server. Nucleic Acids Research 38(Web-Server-Issue): 138-143 (2010)
64		Masahiro Hattori, Nobuya Tanaka, Minoru Kanehisa, Susumu Goto: SIMCOMP/SUBCOMP: chemical structure search servers for network analyses. Nucleic Acids Research 38(Web-Server-Issue): 652-656 (2010)
	2009
63		Yoshihiro Yamanishi, Masahiro Hattori, Masaaki Kotera, Susumu Goto, Minoru Kanehisa: E-zyme: predicting potential EC numbers from the chemical transformation pattern of substrate-product pairs. Bioinformatics 25(12): (2009)
	2008
62		Minoru Kanehisa: KEGG for Medical and Pharmaceutical Applications. APBC 2008: 5
61		Kosuke Hashimoto, Ichigaku Takigawa, Motoki Shiga, Minoru Kanehisa, Hiroshi Mamitsuka: Mining significant tree patterns in carbohydrate sugar chains. ECCB 2008: 167-173
60		Yoshihiro Yamanishi, Michihiro Araki, Alex Gutteridge, Wataru Honda, Minoru Kanehisa: Prediction of drug-target interaction networks from the integration of chemical and genomic spaces. ISMB 2008: 232-240
59		C. Nelson Hayes, Diego Diez, Nicolas Joannin, Wataru Honda, Minoru Kanehisa, Mats Wahlgren, Craig E. Wheelock, Susumu Goto: varDB: a pathogen-specific sequence database of protein families involved in antigenic variation. Bioinformatics 24(21): 2564-2565 (2008)
58		Shuichi Kawashima, Piotr Pokarowski, Maria Pokarowska, Andrzej Kolinski, Toshiaki Katayama, Minoru Kanehisa: AAindex: amino acid index database, progress report 2008. Nucleic Acids Research 36(Database-Issue): 202-205 (2008)
57		Minoru Kanehisa, Michihiro Araki, Susumu Goto, Masahiro Hattori, Mika Hirakawa, Masumi Itoh, Toshiaki Katayama, Shuichi Kawashima, Shujiro Okuda, Toshiaki Tokimatsu, Yoshihiro Yamanishi: KEGG for linking genomes to life and the environment. Nucleic Acids Research 36(Database-Issue): 480-484 (2008)
56		Shujiro Okuda, Takuji Yamada, Masami Hamajima, Masumi Itoh, Toshiaki Katayama, Peer Bork, Susumu Goto, Minoru Kanehisa: KEGG Atlas mapping for global analysis of metabolic pathways. Nucleic Acids Research 36(Web-Server-Issue): 423-426 (2008)
55		Kosuke Hashimoto, Kiyoko F. Aoki-Kinoshita, Nobuhisa Ueda, Minoru Kanehisa, Hiroshi Mamitsuka: A new efficient probabilistic model for mining labeled ordered trees applied to glycobiology. TKDD 2(1): (2008)
	2007
54		Tetsuya Sato, Yoshihiro Yamanishi, Katsuhisa Horimoto, Minoru Kanehisa, Hiroyuki Toh: Inference of Protein-Protein Interactions by Using Co-evolutionary Information. AB 2007: 322-333
53		Masashi Fujita, Hisaaki Mihara, Susumu Goto, Nobuyoshi Esaki, Minoru Kanehisa: Mining prokaryotic genomes for unknown amino acids: a stop-codon-based approach. BMC Bioinformatics 8: (2007)
52		Alex Gutteridge, Minoru Kanehisa, Susumu Goto: Regulation of metabolic networks by small molecule metabolites. BMC Bioinformatics 8: (2007)
51		Vachiranee Limviphuvadh, Seigo Tanaka, Susumu Goto, Kunihiro Ueda, Minoru Kanehisa: The commonality of protein interaction networks determined in neurodegenerative disorders (NDDs). Bioinformatics 23(16): 2129-2138 (2007)
50		Yuki Moriya, Masumi Itoh, Shujiro Okuda, Akiyasu C. Yoshizawa, Minoru Kanehisa: KAAS: an automatic genome annotation and pathway reconstruction server. Nucleic Acids Research 35(Web-Server-Issue): 182-185 (2007)
49		Zhenjun Hu, David M. Ng, Takuji Yamada, Chunnuan Chen, Shuichi Kawashima, Joe Mellor, Bolan Linghu, Minoru Kanehisa, Joshua M. Stuart, Charles DeLisi: VisANT 3.0: new modules for pathway visualization, editing, prediction and construction. Nucleic Acids Research 35(Web-Server-Issue): 625-632 (2007)
	2006
48		Kiyoko F. Aoki-Kinoshita, Minoru Kanehisa, Ming-Yang Kao, Xiang-Yang Li, Weizhao Wang: A 6-Approximation Algorithm for Computing Smallest Common AoN-Supertree with Application to the Reconstruction of Glycan Trees. ISAAC 2006: 100-110
47		Kiyoko F. Aoki-Kinoshita, Nobuhisa Ueda, Hiroshi Mamitsuka, Minoru Kanehisa: ProfilePSTMM: capturing tree-structure motifs in carbohydrate sugar chains. ISMB (Supplement of Bioinformatics) 2006: 25-34
46		Jose C. Nacher, Jean-Marc Schwartz, Minoru Kanehisa, Tatsuya Akutsu: Identification of metabolic units induced by environmental signals. ISMB (Supplement of Bioinformatics) 2006: 375-383
45		Kosuke Hashimoto, Kiyoko F. Aoki-Kinoshita, Nobuhisa Ueda, Minoru Kanehisa, Hiroshi Mamitsuka: A new efficient probabilistic model for mining labeled ordered trees. KDD 2006: 177-186
44		Takuji Yamada, Minoru Kanehisa, Susumu Goto: Extraction of phylogenetic network modules from the metabolic network. BMC Bioinformatics 7: 130 (2006)
43		Jean-Marc Schwartz, Minoru Kanehisa: Quantitative elementary mode analysis of metabolic pathways: the example of yeast glycolysis. BMC Bioinformatics 7: 186 (2006)
42		Jian Huang, Alex Gutteridge, Wataru Honda, Minoru Kanehisa: MIMOX: a web tool for phage display based epitope mapping. BMC Bioinformatics 7: 451 (2006)
41		Tetsuya Sato, Yoshihiro Yamanishi, Katsuhisa Horimoto, Minoru Kanehisa, Hiroyuki Toh: Partial correlation coefficient between distance matrices as a new indicator of protein-protein interactions. Bioinformatics 22(20): 2488-2492 (2006)
40		Minoru Kanehisa, Susumu Goto, Masahiro Hattori, Kiyoko F. Aoki-Kinoshita, Masumi Itoh, Shuichi Kawashima, Toshiaki Katayama, Michihiro Araki, Mika Hirakawa: From genomics to chemical genomics: new developments in KEGG. Nucleic Acids Research 34(Database-Issue): 354-357 (2006)
39		Shujiro Okuda, Toshiaki Katayama, Shuichi Kawashima, Susumu Goto, Minoru Kanehisa: ODB: a database of operons accumulating known operons across multiple genomes. Nucleic Acids Research 34(Database-Issue): 358-362 (2006)
38		Ali Masoudi-Nejad, Koichiro Tonomura, Shuichi Kawashima, Yuki Moriya, Masanori Suzuki, Masumi Itoh, Minoru Kanehisa, Takashi Endo, Susumu Goto: EGassembler: online bioinformatics service for large-scale processing, clustering and assembling ESTs and genomic DNA fragments. Nucleic Acids Research 34(Web-Server-Issue): 459-462 (2006)
	2005
37		Jean-Marc Schwartz, Minoru Kanehisa: A quadratic programming approach for decomposing steady-state metabolic flux distributions onto elementary modes. ECCB/JBI 2005: 205
36		Yoshihiro Yamanishi, Jean-Philippe Vert, Minoru Kanehisa: Supervised enzyme network inference from the integration of genomic data and chemical information. ISMB (Supplement of Bioinformatics) 2005: 468-477
35		Tetsuya Sato, Yoshihiro Yamanishi, Minoru Kanehisa, Hiroyuki Toh: The inference of protein-protein interactions by co-evolutionary analysis is improved by excluding the information about the phylogenetic relationships. Bioinformatics 21(17): 3482-3489 (2005)
34		Shin Kawano, Kosuke Hashimoto, Takashi Miyama, Susumu Goto, Minoru Kanehisa: Prediction of glycan structures from gene expression data based on glycosyltransferase reactions. Bioinformatics 21(21): 3976-3982 (2005)
33		Masumi Itoh, Susumu Goto, Tatsuya Akutsu, Minoru Kanehisa: Fast and accurate database homology search using upper bounds of local alignment scores. Bioinformatics 21(7): 912-921 (2005)
32		Kiyoko F. Aoki, Hiroshi Mamitsuka, Tatsuya Akutsu, Minoru Kanehisa: A score matrix to reveal the hidden links in glycans. Bioinformatics 21(8): 1457-1463 (2005)
31		Yoshinori Tamada, Hideo Bannai, Seiya Imoto, Toshiaki Katayama, Minoru Kanehisa, Satoru Miyano: Utilizing Evolutionary Information and Gene Expression Data for Estimating Gene Networks with Bayesian Network Models. J. Bioinformatics and Computational Biology 3(6): 1295-1314 (2005)
	2004
30		Yoshihiro Yamanishi, Jean-Philippe Vert, Minoru Kanehisa: Protein network inference from multiple genomic data: a supervised approach. ISMB/ECCB (Supplement of Bioinformatics) 2004: 363-370
29		Kiyoko F. Aoki, Nobuhisa Ueda, Atsuko Yamaguchi, Minoru Kanehisa, Tatsuya Akutsu, Hiroshi Mamitsuka: Application of a new probabilistic model for recognizing complex patterns in glycans. ISMB/ECCB (Supplement of Bioinformatics) 2004: 6-14
28		Jose C. Nacher, Nobuhisa Ueda, Takuji Yamada, Minoru Kanehisa, Tatsuya Akutsu: Clustering under the line graph transformation: application to reaction network. BMC Bioinformatics 5: 207 (2004)
27		Minoru Kanehisa, Susumu Goto, Shuichi Kawashima, Yasushi Okuno, Masahiro Hattori: The KEGG resource for deciphering the genome. Nucleic Acids Research 32(Database-Issue): 277-280 (2004)
26		Kiyoko F. Aoki, Atsuko Yamaguchi, Nobuhisa Ueda, Tatsuya Akutsu, Hiroshi Mamitsuka, Susumu Goto, Minoru Kanehisa: KCaM (KEGG Carbohydrate Matcher): a software tool for analyzing the structures of carbohydrate sugar chains. Nucleic Acids Research 32(Web-Server-Issue): 267-272 (2004)
25		Kiyoko F. Aoki, Nobuhisa Ueda, Atsuko Yamaguchi, Tatsuya Akutsu, Minoru Kanehisa, Hiroshi Mamitsuka: Managing and Analyzing Carbohydrate Data. SIGMOD Record 33(2): 33-38 (2004)
	2003
24		Jean-Philippe Vert, Minoru Kanehisa: Extracting active pathways from gene expression data. ECCB 2003: 238-244
23		Yoshihiro Yamanishi, Jean-Philippe Vert, A. Nakaya, Minoru Kanehisa: Extraction of correlated gene clusters from multiple genomic data by generalized kernel canonical correlation analysis. ISMB (Supplement of Bioinformatics) 2003: 323-330
22		Keun-Joon Park, Minoru Kanehisa: Prediction of protein subcellular locations by support vector machines using compositions of amino acids and amino acid pairs. Bioinformatics 19(13): 1656-1663 (2003)
	2002
21		Jean-Philippe Vert, Minoru Kanehisa: Graph-Driven Feature Extraction From Microarray Data Using Diffusion Kernels and Kernel CCA. NIPS 2002: 1425-1432
20		Takeshi Kawashima, Shuichi Kawashima, Yuji Kohara, Minoru Kanehisa, Kazuhiro W. Makabe: Update of MAGEST: Maboya Gene Expression patterns and Sequence Tags. Nucleic Acids Research 30(1): 119-120 (2002)
19		Susumu Goto, Yasushi Okuno, Masahiro Hattori, Takaaki Nishioka, Minoru Kanehisa: LIGAND: database of chemical compounds and reactions in biological pathways. Nucleic Acids Research 30(1): 402-404 (2002)
18		Minoru Kanehisa, Susumu Goto, Shuichi Kawashima, Akihiro Nakaya: The KEGG databases at GenomeNet. Nucleic Acids Research 30(1): 42-46 (2002)
	2000
17		Minoru Kanehisa: Sequence comparison to graph comparison--a new generation of algorithms for network analysis of interacting molecules (abstract only). RECOMB 2000: 176
16		Takeshi Kawashima, Shuichi Kawashima, Minoru Kanehisa, Hiroki Nishida, Kazuhiro W. Makabe: MAGEST: MAboya Gene Expression patterns and Sequence Tags. Nucleic Acids Research 28(1): 133-135 (2000)
15		Minoru Kanehisa, Susumu Goto: KEGG: Kyoto Encyclopedia of Genes and Genomes. Nucleic Acids Research 28(1): 27-30 (2000)
14		Shuichi Kawashima, Minoru Kanehisa: AAindex: Amino Acid index database. Nucleic Acids Research 28(1): 374 (2000)
13		Susumu Goto, Takaaki Nishioka, Minoru Kanehisa: LIGAND: chemical database of enzyme reactions. Nucleic Acids Research 28(1): 380-382 (2000)
	1999
12		Kentaro Tomii, Minoru Kanehisa: Systematic Detection of Protein Structural Motifs. Pattern Discovery in Biomolecular Data 1999: 97-110
11		Hiroyuki Ogata, Susumu Goto, Kazushige Sato, Wataru Fujibuchi, Hidemasa Bono, Minoru Kanehisa: KEGG: Kyoto Encyclopedia of Genes and Genomes. Nucleic Acids Research 27(1): 29-34 (1999)
10		Shuichi Kawashima, Hiroyuki Ogata, Minoru Kanehisa: AAindex: Amino Acid Index Database. Nucleic Acids Research 27(1): 368-369 (1999)
9		Susumu Goto, Takaaki Nishioka, Minoru Kanehisa: LIGAND database for enzymes, compounds and reactions. Nucleic Acids Research 27(1): 377-379 (1999)
	1998
8		Susumu Goto, Takaaki Nishioka, Minoru Kanehisa: LIGAND: chemical database for enzyme reactions. Bioinformatics 14(7): 591-599 (1998)
	1994
7		Takahiko Suzuki, Toshihisa Takagi, Satoru Kuhara, Minoru Kanehisa: Development of an integrated Database for Genome Mapping and Nucleotide Sequences. HICSS (5) 1994: 68-76
	1993
6		Y. Matsuo, Minoru Kanehisa: An approach to systematic detection of protein structural motifs. Computer Applications in the Biosciences 9(2): 153-159 (1993)
5		Masato Ishikawa, Tomoyuki Toya, Masaki Hoshida, Katsumi Nitta, A. Ogiwara, Minoru Kanehisa: Multiple sequence alignment by parallel simulated annealing. Computer Applications in the Biosciences 9(3): 267-273 (1993)
	1985
4		Christian Burks, James W. Fickett, W. B. Goad, Minoru Kanehisa, F. I. Lewitter, W. P. Rindone, C. D. Swindell, C. S. Tung, H. S. Bilofsky: The GenBank nucleic acid sequence database. Computer Applications in the Biosciences 1(4): 225-233 (1985)
	1984
3		Minoru Kanehisa, James W. Fickett, W. B. Goad: A relational database system for the maintenance and verification of the Los Alamos sequence library. Nucleic Acids Research 12(1): 149-158 (1984)
2		Minoru Kanehisa: Use of statistical criteria for screening potential homologies in nucleic acid sequences. Nucleic Acids Research 12(1): 203-213 (1984)
1		Minoru Kanehisa, P. Klein, P. Greif, Charles DeLisi: Computer analysis and structure prediction of nucleic acids and proteins. Nucleic Acids Research 12(1): 417-428 (1984)

Coauthor Index

1	Asaph Aharoni	[69]
2	Tatsuya Akutsu	[25] [26] [28] [29] [32] [33] [46]
3	Koh Aoki	[69]
4	Kiyoko F. Aoki-Kinoshita (Kiyoko F. Aoki)	[25] [26] [29] [32] [40] [45] [47] [48] [55]
5	Takeshi Ara	[69]
6	Michihiro Araki	[40] [57] [60]
7	Hideo Bannai	[31]
8	H. S. Bilofsky	[4]
9	Hidemasa Bono	[11]
10	Peer Bork	[56] [68]
11	Christian Burks	[4]
12	Chunnuan Chen	[49]
13	Charles DeLisi	[1] [49]
14	Diego Diez	[59]
15	Takashi Endo	[38]
16	Nobuyoshi Esaki	[53]
17	James W. Fickett	[3] [4]
18	Wataru Fujibuchi	[11]
19	Masashi Fujita	[53]
20	Miho Furumichi	[66] [70]
21	W. B. Goad	[3] [4]
22	Susumu Goto	[8] [9] [11] [13] [15] [18] [19] [26] [27] [33] [34] [38] [39] [40] [44] [51] [52] [53] [56] [57] [59] [63] [64] [65] [66] [67] [70]
23	P. Greif	[1]
24	Alex Gutteridge	[42] [52] [60]
25	Kazuki Hamada	[69]
26	Masami Hamajima	[56]
27	Kosuke Hashimoto	[34] [45] [55] [61]
28	Masahiro Hattori	[19] [27] [40] [57] [63] [64] [65]
29	C. Nelson Hayes	[59]
30	Mika Hirakawa	[40] [57] [66]
31	Atsushi Hiruta	[69]
32	Wataru Honda	[42] [59] [60]
33	Katsuhisa Horimoto	[41] [54]
34	Masaki Hoshida	[5]
35	Zhenjun Hu	[49]
36	Jian Huang	[42]
37	Seiya Imoto	[31]
38	Masato Ishikawa	[5]
39	Masumi Itoh	[33] [38] [40] [50] [56] [57]
40	Nicolas Joannin	[59]
41	Ming-Yang Kao	[48]
42	Toshiaki Katayama	[31] [39] [40] [56] [57] [58]
43	Shingo Kawamura	[69]
44	Shin Kawano	[34]
45	Shuichi Kawashima	[10] [14] [16] [18] [20] [27] [38] [39] [40] [49] [57] [58]
46	Takeshi Kawashima	[16] [20]
47	P. Klein	[1]
48	Yuji Kohara	[20]
49	Andrzej Kolinski	[58]
50	Masaaki Kotera	[63] [65] [67]
51	Satoru Kuhara	[7]
52	Ivica Letunic	[68]
53	F. I. Lewitter	[4]
54	Xiang-Yang Li	[48]
55	Vachiranee Limviphuvadh	[51]
56	Bolan Linghu	[49]
57	Kazuhiro W. Makabe	[16] [20]
58	Hiroshi Mamitsuka	[25] [26] [29] [32] [45] [47] [55] [61]
59	Ali Masoudi-Nejad	[38]
60	Y. Matsuo	[6]
61	Joe Mellor	[49]
62	Hisaaki Mihara	[53]
63	Takashi Miyama	[34]
64	Satoru Miyano	[31]
65	Yuki Moriya	[38] [50] [65]
66	Jose C. Nacher	[28] [46]
67	A. Nakaya	[23]
68	Akihiro Nakaya	[18]
69	David M. Ng	[49]
70	Hiroki Nishida	[16]
71	Takaaki Nishioka	[8] [9] [13] [19]
72	Katsumi Nitta	[5]
73	Hiroyuki Ogata	[10] [11]
74	Yoshiyuki Ogata	[69]
75	A. Ogiwara	[5]
76	Takashi Ohno	[69]
77	Shujiro Okuda	[39] [50] [56] [57] [68]
78	Yasushi Okuno	[19] [27]
79	Hirofumi Otsuka	[69]
80	Keun-Joon Park	[22]
81	Maria Pokarowska	[58]
82	Piotr Pokarowski	[58]
83	W. P. Rindone	[4]
84	Kazuki Saito	[69]
85	Nozomu Sakurai	[69]
86	Ryosuke Sano	[69]
87	Kazushige Sato	[11]
88	Tetsuya Sato	[35] [41] [54]
89	Yoko Sato	[70]
90	Jean-Marc Schwartz	[37] [43] [46]
91	Daisuke Shibata	[69]
92	Motoki Shiga	[61]
93	Daichi Shigemizu	[65]
94	Joshua M. Stuart	[49]
95	Kenjiro Sugiyama	[69]
96	Hideyuki Suzuki	[69]
97	Masanori Suzuki	[38]
98	Takahiko Suzuki	[7]
99	C. D. Swindell	[4]
100	Toshihisa Takagi	[7]
101	Ichigaku Takigawa	[61]
102	Yoshinori Tamada	[31]
103	Mao Tanabe	[66] [70]
104	Nobuya Tanaka	[64]
105	Seigo Tanaka	[51]
106	Hiroyuki Toh	[35] [41] [54]
107	Toshiaki Tokimatsu	[57] [65] [69]
108	Kentaro Tomii	[12]
109	Koichiro Tonomura	[38]
110	Tomoyuki Toya	[5]
111	C. S. Tung	[4]
112	Kunihiro Ueda	[51]
113	Nobuhisa Ueda	[25] [26] [28] [29] [45] [47] [55]
114	Jean-Philippe Vert	[21] [23] [24] [30] [36]
115	Mats Wahlgren	[59]
116	Weizhao Wang	[48]
117	Craig E. Wheelock	[59]
118	Takuji Yamada	[28] [44] [49] [56] [68]
119	Atsuko Yamaguchi	[25] [26] [29]
120	Yoshihiro Yamanishi	[23] [30] [35] [36] [41] [54] [57] [60] [63] [67]
121	Kiyoshi Yamazaki	[69]
122	Kentaro Yano	[69]
123	Koji Yokoyama	[69]
124	Akiyasu C. Yoshizawa	[50]

Colors in the list of coauthors

Last update Fri Jun 1 15:44:53 2012 CET by the DBLP Team — Data released under the ODC-BY 1.0 license — See also our legal information page