Robert L. Jernigan

	2011
27		Yuanyuan Huang, Steve Bonett, Andrzej Kloczkowski, Robert L. Jernigan, Zhijun Wu: P.R.E.S.S. - An R-package for exploring residual-level protein structural statistics. BIBM Workshops 2011: 382-389
26		Juan Luis Fernández Martínez, Esperanza García Gonzalo, Saras Saraswathi, Robert L. Jernigan, Andrzej Kloczkowski: Particle Swarm Optimization: A Powerful Family of Stochastic Optimizers. Analysis, Design and Application to Inverse Modelling. ICSI (1) 2011: 1-8
25		Michael T. Zimmermann, Andrzej Kloczkowski, Robert L. Jernigan: MAVEN: Motion Analysis and Visualization of Elastic Networks and Structural Ensembles. BMC Bioinformatics 12: 264 (2011)
24		Di Wu, Stephen Smith, Hannah Mahan, Robert L. Jernigan, Zhijun Wu: Analysis of protein dynamics using local-DME calculations. IJBRA 7(2): 146-161 (2011)
	2010
23		Michael T. Zimmermann, Aris Skliros, Saras Saraswathi, Andrzej Kloczkowski, Robert L. Jernigan: Immunoglobulin functional motions and their effects on the complementarity determining regions. BCB 2010: 621-626
22		Ataur R. Katebi, Pawel Gniewek, Michael Zimmermann, Saras Saraswathi, Zhenming Gong, Christopher K. Tuggle, Andrzej Kloczkowski, Robert L. Jernigan: Immunological implications of a structural analysis of two different porcine IL1β proteins expressed in macrophages and embryos. BCB 2010: 653-655
21		Saras Saraswathi, Andrzej Kloczkowski, Robert L. Jernigan: An Extreme Learning Machine Classifier for Prediction of Relative Solvent Accessibility in Proteins. IJCCI (ICFC-ICNC) 2010: 364-369
20		Saras Saraswathi, Robert L. Jernigan, Andrzej Kloczkowski, Andrzej Kolinski: Protein Secondary Structure Prediction using Knowledge-based Potentials. IJCCI (ICFC-ICNC) 2010: 370-375
19		Yaping Feng, Andrzej Kloczkowski, Robert L. Jernigan: Potentials 'R'Us web-server for protein energy estimations with coarse-grained knowledge-based potentials. BMC Bioinformatics 11: 92 (2010)
	2009
18		Feng Cui, Kriti Mukhopadhyay, Won-Bin Young, Robert L. Jernigan, Zhijun Wu: Refinement of under-determined loops of Human Prion Protein by database-derived distance constraints. IJDMB 3(4): 454-468 (2009)
17		Xiaoyong Sun, Di Wu, Robert L. Jernigan, Zhijun Wu: PRTAD: A database for protein residue torsion angle distributions. IJDMB 3(4): 469-482 (2009)
	2008
16		Myron Peto, Andrzej Kloczkowski, Vasant Honavar, Robert L. Jernigan: Use of machine learning algorithms to classify binary protein sequences as highly-designable or poorly-designable. BMC Bioinformatics 9: (2008)
15		Feng Cui, Robert L. Jernigan, Zhijun Wu: Knowledge-Based versus experimentally Acquired Distance and Angle Constraints for NMR Structure Refinement. J. Bioinformatics and Computational Biology 6(2): 283-300 (2008)
	2007
14		Haitao Cheng, Taner Z. Sen, Robert L. Jernigan, Andrzej Kloczkowski: Consensus Data Mining (CDM) Protein Secondary Structure Prediction Server: Combining GOR V and Fragment Database Mining (FDM). Bioinformatics 23(19): 2628-2630 (2007)
13		Di Wu, Feng Cui, Robert L. Jernigan, Zhijun Wu: PIDD: database for Protein Inter-atomic Distance Distributions. Nucleic Acids Research 35(Database-Issue): 202-207 (2007)
12		Michael Terribilini, Jeffry D. Sander, Jae-Hyung Lee, Peter Zaback, Robert L. Jernigan, Vasant Honavar, Drena Dobbs: RNABindR: a server for analyzing and predicting RNA-binding sites in proteins. Nucleic Acids Research 35(Web-Server-Issue): 578-584 (2007)
	2006
11		Michael Terribilini, Jae-Hyung Lee, Changhui Yan, Robert L. Jernigan, Susan Carpenter: Identifying Interaction Sites in "Recalcitrant" Proteins: Predicted Protein and RNA Binding Sites in Rev Proteins of HIV-1 and EIAV Agree with Experimental Data. Pacific Symposium on Biocomputing 2006: 415-426
10		Changhui Yan, Michael Terribilini, Feihong Wu, Robert L. Jernigan, Drena Dobbs, Vasant Honavar: Predicting DNA-binding sites of proteins from amino acid sequence. BMC Bioinformatics 7: 262 (2006)
9		Taner Z. Sen, Andrzej Kloczkowski, Robert L. Jernigan: Functional clustering of yeast proteins from the protein-protein interaction network. BMC Bioinformatics 7: 355 (2006)
	2005
8		Taner Z. Sen, Robert L. Jernigan, Jean Garnier, Andrzej Kloczkowski: GOR V server for protein secondary structure prediction. Bioinformatics 21(11): 2787-2788 (2005)
7		Michael Terribilini, Jae-Hyung Lee, Changhui Yan, Robert L. Jernigan, Susan Carpenter, Vasant Honavar, Drena Dobbs: Identifying Interaction Sites in "Recalcitrant" Proteins: Predicted Protein and Rna Binding Sites in Rev Proteins of Hiv-1 and Eiav Agree with Experimental Data CoRR abs/cs/0511075: (2005)
6		Feng Cui, Robert L. Jernigan, Zhijun Wu: Refinement of Nmr-determined Protein Structures with Database Derived Distance Constraints. J. Bioinformatics and Computational Biology 3(6): 1315-1330 (2005)
	2004
5		Taner Z. Sen, Andrzej Kloczkowski, Robert L. Jernigan, Changhui Yan, Vasant Honavar, Kai-Ming Ho, Cai-Zhuang Wang, Yungok Ihm, Haibo Cao, Xun Gu, Drena Dobbs: Predicting binding sites of hydrolase-inhibitor complexes by combining several methods. BMC Bioinformatics 5: 205 (2004)
	2003
4		Moon K. Kim, Robert L. Jernigan, Bruce A. Shapiro, Gregory S. Chirikjian: A Study of Conformational Changes in Macromolecules: The Coarse-Grained Elastic Network Interpolation Method. METMBS 2003: 140-145
	2002
3		Marc L. Mansfield, David G. Covell, Robert L. Jernigan: A New Class of Molecular Shape Descriptors, 1. Theory and Properties. Journal of Chemical Information and Computer Sciences 42(2): 259-273 (2002)
2		Pemra Doruker, Robert L. Jernigan, Ivet Bahar: Dynamics of large proteins through hierarchical levels of coarse-grained structures. Journal of Computational Chemistry 23(1): 119-127 (2002)
	1997
1		Brooke Lustig, Shalini Arora, Robert L. Jernigan: RNA base-amino acid interaction strengths derived from structures and sequences. Nucleic Acids Research 25(13): 2562-2565 (1997)

Coauthor Index

1	Shalini Arora	[1]
2	Ivet Bahar	[2]
3	Steve Bonett	[27]
4	Haibo Cao	[5]
5	Susan Carpenter	[7] [11]
6	Haitao Cheng	[14]
7	Gregory S. Chirikjian	[4]
8	David G. Covell	[3]
9	Feng Cui	[6] [13] [15] [18]
10	Drena Dobbs	[5] [7] [10] [12]
11	Pemra Doruker	[2]
12	Yaping Feng	[19]
13	Jean Garnier	[8]
14	Pawel Gniewek	[22]
15	Zhenming Gong	[22]
16	Esperanza García Gonzalo	[26]
17	Xun Gu	[5]
18	Kai-Ming Ho	[5]
19	Vasant Honavar	[5] [7] [10] [12] [16]
20	Yuanyuan Huang	[27]
21	Yungok Ihm	[5]
22	Ataur R. Katebi	[22]
23	Moon K. Kim	[4]
24	Andrzej Kloczkowski	[5] [8] [9] [14] [16] [19] [20] [21] [22] [23] [25] [26] [27]
25	Andrzej Kolinski	[20]
26	Jae-Hyung Lee	[7] [11] [12]
27	Brooke Lustig	[1]
28	Hannah Mahan	[24]
29	Marc L. Mansfield	[3]
30	Juan Luis Fernández Martínez	[26]
31	Kriti Mukhopadhyay	[18]
32	Myron Peto	[16]
33	Jeffry D. Sander	[12]
34	Saras Saraswathi	[20] [21] [22] [23] [26]
35	Taner Z. Sen	[5] [8] [9] [14]
36	Bruce A. Shapiro	[4]
37	Aris Skliros	[23]
38	Stephen Smith	[24]
39	Xiaoyong Sun	[17]
40	Michael Terribilini	[7] [10] [11] [12]
41	Christopher K. Tuggle	[22]
42	Cai-Zhuang Wang	[5]
43	Di Wu	[13] [17] [24]
44	Feihong Wu	[10]
45	Zhijun Wu	[6] [13] [15] [17] [18] [24] [27]
46	Changhui Yan	[5] [7] [10] [11]
47	Won-Bin Young	[18]
48	Peter Zaback	[12]
49	Michael Zimmermann	[22]
50	Michael T. Zimmermann	[23] [25]

Colors in the list of coauthors

Last update Sat Jun 2 20:57:36 2012 CET by the DBLP Team — Data released under the ODC-BY 1.0 license — See also our legal information page