 | 2011 |
| 28 |  | Urban Borstnik,
Benjamin T. Miller,
Bernard R. Brooks,
Dusanka Janezic:
The distributed diagonal force decomposition method for parallelizing molecular dynamics simulations.
Journal of Computational Chemistry 32(14): 3005-3013 (2011) |
| 2010 |
| 27 |  | Janez Konc,
Dusanka Janezic:
ProBiS algorithm for detection of structurally similar protein binding sites by local structural alignment.
Bioinformatics 26(9): 1160-1168 (2010) |
| 26 |  | Janez Konc,
Dusanka Janezic:
ProBiS: a web server for detection of structurally similar protein binding sites.
Nucleic Acids Research 38(Web-Server-Issue): 436-440 (2010) |
| 2009 |
| 25 |  | Dusanka Janezic,
Ante Milicevic,
Sonja Nikolic,
Nenad Trinajstic:
Topological Complexity of Molecules.
Encyclopedia of Complexity and Systems Science 2009: 9210-9224 |
| 2008 |
| 24 |  | Matej Praprotnik,
Stanko Hocevar,
Milan Hodoscek,
Matej Penca,
Dusanka Janezic:
New all-atom force field for molecular dynamics simulation of an AlPO4-34 molecular sieve.
Journal of Computational Chemistry 29(1): 122-129 (2008) |
| 2007 |
| 23 |  | Janez Konc,
Dusanka Janezic:
A Branch and Bound Algorithm for Matching Protein Structures.
ICANNGA (2) 2007: 399-406 |
| 2006 |
| 22 |  | Franci Merzel,
Milan Hodoscek,
Dusanka Janezic,
Alain Sanson:
New force field for calcium binding sites in annexin-membrane complexes.
Journal of Computational Chemistry 27(4): 446-452 (2006) |
| 2005 |
| 21 |  | Mircea V. Diudea,
Csaba L. Nagy,
Ioan Silaghi-Dumitrescu,
Ante Graovac,
Dusanka Janezic,
Drazen Vikic-Topic:
Periodic Cages.
Journal of Chemical Information and Modeling 45(2): 293-299 (2005) |
| 20 |  | Dusanka Janezic:
The Regional Biophysics Meeting March 16-20, 2005, Zrece, Slovenia.
Journal of Chemical Information and Modeling 45(6): 1481 (2005) |
| 19 |  | Matej Praprotnik,
Dusanka Janezic:
Molecular Dynamics Integration Meets Standard Theory of Molecular Vibrations.
Journal of Chemical Information and Modeling 45(6): 1571-1579 (2005) |
| 18 |  | Urban Borstnik,
Dusanka Janezic:
Symplectic Molecular Dynamics Simulations on Specially Designed Parallel Computers.
Journal of Chemical Information and Modeling 45(6): 1600-1604 (2005) |
| 2004 |
| 17 |  | Dusanka Janezic,
Ante Graovac:
The Eighteenth International Course & Conference on the Interfaces among Mathematics, Chemistry & Computer Sciences June 23-28, 2003 Dubrovnik, Croatia.
Journal of Chemical Information and Modeling 44(2): 289 (2004) |
| 16 |  | Urban Borstnik,
Milan Hodoscek,
Dusanka Janezic:
Improving the Performance of Molecular Dynamics Simulations on Parallel Clusters.
Journal of Chemical Information and Modeling 44(2): 359-364 (2004) |
| 15 |  | István Lukovits,
Dusanka Janezic:
Enumeration of Conjugated Circuits in Nanotubes.
Journal of Chemical Information and Modeling 44(2): 410-414 (2004) |
| 14 |  | Urban Borstnik,
Dusanka Janezic:
Reviews in Computational Chemistry. Volume 19 Edited by Kenny B. Lipkowitz, Raima Larter, and Thomas R. Cundari. Wiley-VCH 2003, ISBN 0-471-23585-7.
Journal of Chemical Information and Modeling 44(4): 1515 (2004) |
| 2003 |
| 13 |  | Dusanka Janezic,
Matej Praprotnik:
Molecular Dynamics Integration Time Step Dependence of the Split Integration Symplectic Method on System Density.
Journal of Chemical Information and Computer Sciences 43(6): 1922-1927 (2003) |
| 1997 |
| 12 |  | Roman Trobec,
Franci Merzel,
Dusanka Janezic:
Computational Complexity of Split Symplectic MD Integration Method.
PARCO 1997: 541-548 |
| 11 |  | Dusanka Janezic,
Franci Merzel:
Split Integration Symplectic Method for Molecular Dynamics Integration.
Journal of Chemical Information and Computer Sciences 37(6): 1048-1054 (1997) |
| 10 |  | Roman Trobec,
Franci Merzel,
Dusanka Janezic:
The Complexity of Parallel Symplectic Molecular Dynamics Algorithms.
Journal of Chemical Information and Computer Sciences 37(6): 1055-1062 (1997) |
| 1995 |
| 9 |  | Roman Trobec,
Dusanka Janezic:
Comparison of Parallel Verlet and Implicit Runge-Kutta Methods for Molecular Dynamics Integration.
Journal of Chemical Information and Computer Sciences 35(1): 100-105 (1995) |
| 8 |  | Dusanka Janezic,
Franci Merzel:
An Efficient Symplectic Integration Algorithm for Molecular Dynamics Simulations.
Journal of Chemical Information and Computer Sciences 35(2): 321-326 (1995) |
| 7 |  | Bernard R. Brooks,
Dusanka Janezic,
Martin Karplus:
Harmonic Analysis of Large Systems. I. Methodology.
Journal of Computational Chemistry 16(12): 1522-1542 (1995) |
| 6 |  | Dusanka Janezic,
Martin Karplus:
Harmonic Analysis of Large Systems. II. Comaprison of Different Protein Models.
Journal of Computational Chemistry 16(12): 1543-1553 (1995) |
| 5 |  | Dusanka Janezic,
Richard M. Venable,
Martin Karplus:
Harmonic Analysis of Large Systems. III. Comparison with Molecular Dynamics.
Journal of Computational Chemistry 16(12): 1554-1568 (1995) |
| 1994 |
| 4 |  | Dusanka Janezic,
Roman Trobec:
Parallelization of an Implicit Runge-Kutta Method for Molecular Dynamics Integration.
Journal of Chemical Information and Computer Sciences 34(3): 641-646 (1994) |
| 1993 |
| 3 |  | Dusanka Janezic,
Bojan Orel:
Implicit Runge-Kutta method for molecular dynamics integration.
Journal of Chemical Information and Computer Sciences 33(2): 252-257 (1993) |
| 2 |  | Roman Trobec,
Izidor Jerebic,
Dusanka Janezic:
Parallel Algorithm for Molecular Dynamics Integration.
Parallel Computing 19(9): 1029-1039 (1993) |
| 1990 |
| 1 |  | Dusanka Janezic,
Matej Penca,
B. B. Lide,
David R. Lide:
Graphical handling of wide-ranging data: graphing of photon cross-section data.
Journal of Chemical Information and Computer Sciences 30(1): 30-32 (1990) |