Jesús A. Izaguirre

	2011
32		Dinesh Rajan, Anthony Canino, Jesús A. Izaguirre, Douglas Thain: Converting a High Performance Application to an Elastic Cloud Application. CloudCom 2011: 383-390
	2010
31		Faruck Morcos, Marcin Sikora, Mark S. Alber, Dale Kaiser, Jesús A. Izaguirre: Estimation of Protein and Domain Interactions in the Switching Motility System of Myxococcus Xanthus. Pacific Symposium on Biocomputing 2010: 157-165
30		Jesús A. Izaguirre, Christopher R. Sweet, Vijay S. Pande: Multiscale Dynamics of Macromolecules Using Normal Mode Langevin. Pacific Symposium on Biocomputing 2010: 240-251
29		Faruck Morcos, Marcin Sikora, Mark S. Alber, Dale Kaiser, Jesús A. Izaguirre: Belief propagation estimation of protein and domain interactions using the sum-product algorithm. IEEE Transactions on Information Theory 56(2): 742-755 (2010)
28		Trevor M. Cickovski, Santanu Chatterjee, Jacob Wenger, Christopher R. Sweet, Jesús A. Izaguirre: MDLab: A molecular dynamics simulation prototyping environment. Journal of Computational Chemistry 31(7): 1345-1356 (2010)
27		Faruck Morcos, Santanu Chatterjee, Christopher L. McClendon, Paul Brenner, Roberto López-Rendón, John Zintsmaster, Mária Ercsey-Ravasz, Christopher R. Sweet, Matthew P. Jacobson, Jeffrey W. Peng, Jesús A. Izaguirre: Modeling Conformational Ensembles of Slow Functional Motions in Pin1-WW. PLoS Computational Biology 6(12): (2010)
	2009
26		Faruck Morcos, Charles Lamanna, Nitesh Chawla, Jesús A. Izaguirre: Determination of Specificity Residues in Two Component Systems using Graphlets. BIOCOMP 2009: 860-866
	2008
25		Faruck Morcos, Charles Lamanna, Marcin Sikora, Jesús A. Izaguirre: Cytoprophet: a Cytoscape plug-in for protein and domain interaction networks inference. Bioinformatics 24(19): 2265-2266 (2008)
24		Faruck Morcos, Charles Lamanna, Marcin Sikora, Jesús A. Izaguirre: Addendum. Cytoprophet: a Cytoscape plug-in for protein and domain interaction networks inference. Bioinformatics 24(23): 2805 (2008)
23		Justin M. Wozniak, Paul Brenner, Douglas Thain, Aaron Striegel, Jesús A. Izaguirre: Making the best of a bad situation: Prioritized storage management in GEMS. Future Generation Comp. Syst. 24(1): 10-16 (2008)
22		Paul Brenner, Justin M. Wozniak, Douglas Thain, Aaron Striegel, Jeffrey W. Peng, Jesús A. Izaguirre: Biomolecular committor probability calculation enabled by processing in network storage. Parallel Computing 34(11): 652-660 (2008)
	2007
21		Trevor M. Cickovski, Chris Sweet, Jesús A. Izaguirre: MDL, A Domain-Specific Language for Molecular Dynamics. Annual Simulation Symposium 2007: 256-266
20		Paul Brenner, Justin M. Wozniak, Douglas Thain, Aaron Striegel, Jeffrey W. Peng, Jesús A. Izaguirre: Biomolecular Path Sampling Enabled by Processing in Network Storage. IPDPS 2007: 1-6
19		Nan Chen, James A. Glazier, Jesús A. Izaguirre, Mark S. Alber: A parallel implementation of the Cellular Potts Model for simulation of cell-based morphogenesis. Computer Physics Communications 176(11-12): 670-681 (2007)
18		Trevor M. Cickovski, Kedar Aras, Maciej Swat, Roeland Merks, Tilmann Glimm, H. George E. Hentschel, Mark S. Alber, James A. Glazier, Stuart A. Newman, Jesús A. Izaguirre: From Genes to Organisms Via the Cell: A Problem-Solving Environment for Multicellular Development. Computing in Science and Engineering 9(4): 50-60 (2007)
17		Chengbang Huang, Faruck Morcos, Simon P. Kanaan, Stefan Wuchty, Danny Z. Chen, Jesús A. Izaguirre: Predicting Protein-Protein Interactions from Protein Domains Using a Set Cover Approach. IEEE/ACM Trans. Comput. Biology Bioinform. 4(1): 78-87 (2007)
	2005
16		Justin M. Wozniak, Aaron Striegel, David Salyers, Jesús A. Izaguirre: GIPSE: Streamlining the Management of Simulation on the Grid. Annual Simulation Symposium 2005: 130-137
15		Justin M. Wozniak, Paul Brenner, Douglas Thain, Aaron Striegel, Jesús A. Izaguirre: Generosity and gluttony in GEMS: grid enabled molecular simulations. HPDC 2005: 191-200
14		Douglas Thain, Sander Klous, Justin M. Wozniak, Paul Brenner, Aaron Striegel, Jesús A. Izaguirre: Separating Abstractions from Resources in a Tactical Storage System. SC 2005: 55
13		Trevor M. Cickovski, Chengbang Huang, Rajiv Chaturvedi, Tilmann Glimm, H. George E. Hentschel, Mark S. Alber, James A. Glazier, Stuart A. Newman, Jesús A. Izaguirre: A Framework for Three-Dimensional Simulation of Morphogenesis. IEEE/ACM Trans. Comput. Biology Bioinform. 2(4): 273-288 (2005)
12		Jesús A. Izaguirre, Scott S. Hampton, Thierry Matthey: Parallel multigrid summation for the N-body problem. J. Parallel Distrib. Comput. 65(8): 949-962 (2005)
11		Michael S. Crocker, Scott S. Hampton, Thierry Matthey, Jesús A. Izaguirre: MDSIMAID: Automatic parameter optimization in fast electrostatic algorithms. Journal of Computational Chemistry 26(10): 1021-1031 (2005)
	2004
10		Rajiv Chaturvedi, Chengbang Huang, Jesús A. Izaguirre, Stuart A. Newman, James A. Glazier, Mark S. Alber: A Hybrid Discrete-Continuum Model for 3-D Skeletogenesis of the Vertebrate Limb. ACRI 2004: 543-552
9		Scott S. Hampton, Jesús A. Izaguirre: Improved Sampling for Biological Molecules Using Shadow Hybrid Monte Carlo. International Conference on Computational Science 2004: 268-275
8		Thierry Matthey, Trevor M. Cickovski, Scott S. Hampton, Alice Ko, Qun Ma, Matthew Nyerges, Troy Raeder, Thomas Slabach, Jesús A. Izaguirre: ProtoMol, an object-oriented framework for prototyping novel algorithms for molecular dynamics. ACM Trans. Math. Softw. 30(3): 237-265 (2004)
7		Jesús A. Izaguirre, Rajiv Chaturvedi, Chengbang Huang, Trevor M. Cickovski, J. Coffland, G. Thomas, Gabor Forgacs, Mark S. Alber, G. Hentschel, Stuart A. Newman, James A. Glazier: COMPUCELL, a multi-model framework for simulation of morphogenesis. Bioinformatics 20(7): 1129-1137 (2004)
	2003
6		Rajiv Chaturvedi, Jesús A. Izaguirre, Chengbang Huang, Trevor M. Cickovski, P. Virtue, G. Thomas, Gabor Forgacs, Mark S. Alber, G. Hentschel, Stuart A. Newman, James A. Glazier: Multi-model Simulations of Chicken Limb Morphogenesis. International Conference on Computational Science 2003: 39-49
5		Thierry Matthey, Alice Ko, Jesús A. Izaguirre: PROTOMOL: A Molecular Dynamics Research Framework for Algorithmic Development. International Conference on Computational Science 2003: 50-59
4		Qun Ma, Jesús A. Izaguirre, Robert D. Skeel: Nonlinear Instability in Multiple Time Stepping Molecular Dynamics. SAC 2003: 167-171
3		Qun Ma, Jesús A. Izaguirre: Long Time Step Molecular Dynamics using Targeted Langevin Stabilization. SAC 2003: 178-182
	2001
2		Shannon K. Kuntz, Richard C. Murphy, Michael T. Niemier, Jesús A. Izaguirre, Peter M. Kogge: Petaflop Computing for Protein Folding. PPSC 2001
1		Thierry Matthey, Jesús A. Izaguirre: ProtoMol: A Molecular Dynamics Framework with Incremental Parallelization. PPSC 2001

Coauthor Index

1	Mark S. Alber	[6] [7] [10] [13] [18] [19] [29] [31]
2	Kedar Aras	[18]
3	Paul Brenner	[14] [15] [20] [22] [23] [27]
4	Anthony Canino	[32]
5	Santanu Chatterjee	[27] [28]
6	Rajiv Chaturvedi	[6] [7] [10] [13]
7	Nitesh Chawla	[26]
8	Danny Z. Chen	[17]
9	Nan Chen	[19]
10	Trevor M. Cickovski	[6] [7] [8] [13] [18] [21] [28]
11	J. Coffland	[7]
12	Michael S. Crocker	[11]
13	Mária Ercsey-Ravasz	[27]
14	Gabor Forgacs	[6] [7]
15	James A. Glazier	[6] [7] [10] [13] [18] [19]
16	Tilmann Glimm	[13] [18]
17	Scott S. Hampton	[8] [9] [11] [12]
18	G. Hentschel	[6] [7]
19	H. George E. Hentschel	[13] [18]
20	Chengbang Huang	[6] [7] [10] [13] [17]
21	Matthew P. Jacobson	[27]
22	Dale Kaiser	[29] [31]
23	Simon P. Kanaan	[17]
24	Sander Klous	[14]
25	Alice Ko	[5] [8]
26	Peter M. Kogge	[2]
27	Shannon K. Kuntz	[2]
28	Charles Lamanna	[24] [25] [26]
29	Roberto López-Rendón	[27]
30	Qun Ma	[3] [4] [8]
31	Thierry Matthey	[1] [5] [8] [11] [12]
32	Christopher L. McClendon	[27]
33	Roeland Merks	[18]
34	Faruck Morcos	[17] [24] [25] [26] [27] [29] [31]
35	Richard C. Murphy	[2]
36	Stuart A. Newman	[6] [7] [10] [13] [18]
37	Michael T. Niemier	[2]
38	Matthew Nyerges	[8]
39	Vijay S. Pande	[30]
40	Jeffrey W. Peng	[20] [22] [27]
41	Troy Raeder	[8]
42	Dinesh Rajan	[32]
43	David Salyers	[16]
44	Marcin Sikora	[24] [25] [29] [31]
45	Robert D. Skeel	[4]
46	Thomas Slabach	[8]
47	Aaron Striegel	[14] [15] [16] [20] [22] [23]
48	Maciej Swat	[18]
49	Christopher R. Sweet (Chris Sweet)	[21] [27] [28] [30]
50	Douglas Thain	[14] [15] [20] [22] [23] [32]
51	G. Thomas	[6] [7]
52	P. Virtue	[6]
53	Jacob Wenger	[28]
54	Justin M. Wozniak	[14] [15] [16] [20] [22] [23]
55	Stefan Wuchty	[17]
56	John Zintsmaster	[27]

Last update Thu May 31 18:55:10 2012 CET by the DBLP Team — Data released under the ODC-BY 1.0 license — See also our legal information page