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| 2011 | ||
|---|---|---|
| 21 | Wout Megchelenbrink, Martijn A. Huynen, Elena Marchiori: Flux Measurement Selection in Metabolic Networks. PRIB 2011: 214-224 | |
| 20 | Bas E. Dutilh, Rasa Jurgelenaite, Radek Szklarczyk, Sacha A. F. T. van Hijum, Harry R. Harhangi, Markus Schmid, Bart de Wild, Kees-Jan Françoijs, Henk Stunnenberg, Marc Strous, Mike S. M. Jetten, Huub J. M. Op den Camp, Martijn A. Huynen: FACIL: Fast and Accurate Genetic Code Inference and Logo. Bioinformatics 27(14): 1929-1933 (2011) | |
| 19 | Jaime Huerta-Cepas, Joaquín Dopazo, Martijn A. Huynen, Toni Gabaldón: Evidence for short-time divergence and long-time conservation of tissue-specific expression after gene duplication. Briefings in Bioinformatics 12(5): 442-448 (2011) | |
| 2010 | ||
| 18 | Iziah Edwin Sama, Martijn A. Huynen: Measuring the physical cohesiveness of proteins using physical interaction enrichment. Bioinformatics 26(21): 2737-2743 (2010) | |
| 2009 | ||
| 17 | Bas E. Dutilh, Martijn A. Huynen, Marc Strous: Increasing the coverage of a metapopulation consensus genome by iterative read mapping and assembly. Bioinformatics 25(21): 2878-2881 (2009) | |
| 2008 | ||
| 16 | Martin Oti, Jeroen van Reeuwijk, Martijn A. Huynen, Han G. Brunner: Conserved co-expression for candidate disease gene prioritization. BMC Bioinformatics 9: (2008) | |
| 15 | Bas E. Dutilh, Ying He, Maarten L. Hekkelman, Martijn A. Huynen: Signature, a web server for taxonomic characterization of sequence samples using signature genes. Nucleic Acids Research 36(Web-Server-Issue): 470-474 (2008) | |
| 2007 | ||
| 14 | Stefan Gräf, Fiona G. G. Nielsen, Stefan Kurtz, Martijn A. Huynen, Ewan Birney, Henk Stunnenberg, Paul Flicek: Optimized design and assessment of whole genome tiling arrays. ISMB/ECCB (Supplement of Bioinformatics) 2007: 195-204 | |
| 13 | Fiona G. G. Nielsen, Stefan Gräf, Xinmin Zhang, Stefan Kurtz, Sergei Denissov, Roland Green, Ewan Birney, Paul Flicek, Martijn A. Huynen, Henk Stunnenberg: Optimising oligonucleotide array design for ChIP-on-chip. BMC Bioinformatics 8(S-8): (2007) | |
| 12 | René T. J. M. van der Heijden, Berend Snel, Vera van Noort, Martijn A. Huynen: Orthology prediction at scalable resolution by phylogenetic tree analysis. BMC Bioinformatics 8: (2007) | |
| 11 | Bas E. Dutilh, Vera van Noort, René T. J. M. van der Heijden, T. Boekhout, Berend Snel, Martijn A. Huynen: Assessment of phylogenomic and orthology approaches for phylogenetic inference. Bioinformatics 23(7): 815-824 (2007) | |
| 10 | Toni Gabaldón, Martijn A. Huynen: From Endosymbiont to Host-Controlled Organelle: The Hijacking of Mitochondrial Protein Synthesis and Metabolism. PLoS Computational Biology 3(11): (2007) | |
| 2005 | ||
| 9 | Toni Gabaldón, Martijn A. Huynen: Lineage-specific gene loss following mitochondrial endosymbiosis and its potential for function prediction in eukaryotes. ECCB/JBI 2005: 150 | |
| 8 | Victor Kunin, Sarah A. Teichmann, Martijn A. Huynen, Christos A. Ouzounis: The properties of protein family space depend on experimental design. Bioinformatics 21(11): 2618-2622 (2005) | |
| 7 | Christian von Mering, Lars Juhl Jensen, Berend Snel, Sean D. Hooper, Markus Krupp, Mathilde Foglierini, Nelly Jouffre, Martijn A. Huynen, Peer Bork: STRING: known and predicted protein-protein associations, integrated and transferred across organisms. Nucleic Acids Research 33(Database-Issue): 433-437 (2005) | |
| 2004 | ||
| 6 | Harm van Bakel, Martijn A. Huynen, Cisca Wijmenga: Prokaryotic diversity of the Saccharomyces cerevisiae Atx1p-mediated copper pathway. Bioinformatics 20(16): 2644-2655 (2004) | |
| 2003 | ||
| 5 | Christian von Mering, Martijn A. Huynen, Daniel Jaeggi, Steffen Schmidt, Peer Bork, Berend Snel: STRING: a database of predicted functional associations between proteins. Nucleic Acids Research 31(1): 258-261 (2003) | |
| 1998 | ||
| 4 | Thomas Dandekar, Stefan Schuster, Martijn A. Huynen, Peer Bork: Pathway alignment: Application in the comparative analysis of glycolysis. German Conference on Bioinformatics 1998 | |
| 1996 | ||
| 3 | Ivo L. Hofacker, Martijn A. Huynen, Peter F. Stadler, Paul E. Stolorz: Knowledge Discovery in RNA Sequence Families of HIV Using Scalable Computers. KDD 1996: 20-25 | |
| 2 | Martijn A. Huynen, Alan S. Perelson, W. A. Vieira, Peter F. Stadler: Base Pairing Probabilities in a Complete HIV-1 RNA. Journal of Computational Biology 3(2): 253-274 (1996) | |
| 1989 | ||
| 1 | Martijn A. Huynen, Paulien Hogeweg: Genetic Algorithms and Information Accumulation during the Evolution of Gene Regulation. ICGA 1989: 225-230 | |
Colors in the list of coauthors
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