Martin Hofmann-Apitius

Rheinische Friedrich-Wilhelms-Universität Bonn, Bonn-Aachen International Center for IT

	2011
19		Sonja Holl, Olav Zimmermann, Martin Hofmann-Apitius: A UNICORE Plugin for HPC-Enabled Scientific Workflows in Taverna 2.2. SERVICES 2011: 220-223
18		Olga Ivchenko, Erfan Younesi, Mohammad Shahid, Antje Wolf, Bernd Müller, Martin Hofmann-Apitius: PLIO: an ontology for formal description of protein-ligand interactions. Bioinformatics 27(12): 1684-1690 (2011)
	2010
17		Bernd Müller, Roman Klinger, Harsha Gurulingappa, Heinz-Theodor Mevissen, Martin Hofmann-Apitius, Juliane Fluck, Christoph M. Friedrich: Abstracts versus Full Texts and Patents: A Quantitative Analysis of Biomedical Entities. IRFC 2010: 152-165
16		Harsha Gurulingappa, Bernd Müller, Roman Klinger, Heinz-Theodor Mevissen, Martin Hofmann-Apitius, Christoph M. Friedrich, Juliane Fluck: Prior Art Search in Chemistry Patents Based On Semantic Concepts and Co-Citation Analysis. TREC 2010
15		Nabeel Azam, Moustafa Ghanem, Dimitrios Kalaitzopoulos, Antje Wolf, Vinod Kasam, Yongjian Wang, Martin Hofmann-Apitius: DockFlow: Achieving interoperability of protein docking tools across heterogeneous Grid middleware. IJAHUC 6(4): 235-251 (2010)
	2009
14		Harsha Gurulingappa, Bernd Müller, Roman Klinger, Heinz-Theodor Mevissen, Martin Hofmann-Apitius, Juliane Fluck, Christoph M. Friedrich: Patent Retrieval in Chemistry Based on Semantically Tagged Named Entities. TREC 2009
13		Corinna Kolárik, Roman Klinger, Martin Hofmann-Apitius: Identification of histone modifications in biomedical text for supporting epigenomic research. BMC Bioinformatics 10(S-1): (2009)
12		Martin Hofmann-Apitius, Erfan Younesi, Vinod Kasam: Direct use of information extraction from scientific text for modeling and simulation in the life sciences. Library Hi Tech 27(4): 505-519 (2009)
	2008
11		Hariharan Rajasekaran, Luigi Lo Iacono, Peer Hasselmeyer, Jochen Fingberg, Paul E. Summers, Siegfried Benkner, Gerhard Engelbrecht, Antonio Arbona, Alessandro Chiarini, Christoph M. Friedrich, Martin Hofmann-Apitius, Kai Kumpf, Bob Moore, Philippe Bijlenga, Jimison Iavindrasana, Henning Müller, Rod D. Hose, Robert Dunlop, Alejandro F. Frangi: @neurIST - Towards a System Architecture for Advanced Disease Management through Integration of Heterogeneous Data, Computing, and Complex Processing Services. CBMS 2008: 361-366
10		Christoph M. Friedrich, Martin Hofmann-Apitius, Robert Dunlop, Ioannis Chronakis, Miriam C. J. M. Sturkenboom, Roelof Risselada, Baldo Oliva, Ferran Sanz: Initial Results on Knowledge Discovery and Decision Support for Intracranial Aneurysms. HEALTHINF (1) 2008: 265-272
9		Roman Klinger, Corinna Kolárik, Juliane Fluck, Martin Hofmann-Apitius, Christoph M. Friedrich: Detection of IUPAC and IUPAC-like chemical names. ISMB 2008: 268-276
8		Laura Inés Furlong, Holger Dach, Martin Hofmann-Apitius, Ferran Sanz: OSIRISv1.2: A named entity recognition system for sequence variants of genes in biomedical literature. BMC Bioinformatics 9: (2008)
7		David Ruau, Corinna Kolárik, Heinz-Theodor Mevissen, Emmanuel Müller, Ira Assent, Ralph Krieger, Thomas Seidl, Martin Hofmann-Apitius, Martin Zenke: Public microarray repository semantic annotation with ontologies employing text mining and expression profile correlation. BMC Bioinformatics 9(S-10): (2008)
6		Vincent Breton, Nicolas Jacq, Vinod Kasam, Martin Hofmann-Apitius: Grid-Added Value to Address Malaria. IEEE Transactions on Information Technology in Biomedicine 12(2): 173-181 (2008)
	2007
5		María-Elena Algorri, Marc Zimmermann, Martin Hofmann-Apitius: Automatic Recognition of Chemical Images. ENC 2007: 41-46
4		Corinna Kolárik, Martin Hofmann-Apitius, Marc Zimmermann, Juliane Fluck: Identification of new drug classification terms in textual resources. ISMB/ECCB (Supplement of Bioinformatics) 2007: 264-272
3		Alejandro F. Frangi, Aurelio Ruiz, Martin Hofmann-Apitius: Understanding Cerebral Aneurysms - The @neurIST Project. ERCIM News 2007(69): (2007)
2		Roman Klinger, Christoph M. Friedrich, Heinz-Theodor Mevissen, Juliane Fluck, Martin Hofmann-Apitius, Laura Inés Furlong, Ferran Sanz: Identifying gene-Specific Variations in Biomedical Text. J. Bioinformatics and Computational Biology 5(6): 1277-1296 (2007)
	2006
1		L.-M. Birkholtz, Olivier Bastien, G. Wells, D. Grando, F. Joubert, Vinod Kasam, Marc Zimmermann, Philippe Ortet, Nicolas Jacq, Sylvaine Roy, Martin Hofmann-Apitius, Vincent Breton, A. I. Louw, Eric Maréchal: Integration and mining of malaria molecular, functional and pharmacological data: how far are we from a chemogenomic knowledge space? CoRR abs/q-bio/0611053: (2006)

Coauthor Index

1	María-Elena Algorri	[5]
2	Antonio Arbona	[11]
3	Ira Assent	[7]
4	Nabeel Azam	[15]
5	Olivier Bastien	[1]
6	Siegfried Benkner	[11]
7	Philippe Bijlenga	[11]
8	L.-M. Birkholtz	[1]
9	Vincent Breton	[1] [6]
10	Alessandro Chiarini	[11]
11	Ioannis Chronakis	[10]
12	Holger Dach	[8]
13	Robert Dunlop	[10] [11]
14	Gerhard Engelbrecht	[11]
15	Jochen Fingberg	[11]
16	Juliane Fluck	[2] [4] [9] [14] [16] [17]
17	Alejandro F. Frangi	[3] [11]
18	Christoph M. Friedrich	[2] [9] [10] [11] [14] [16] [17]
19	Laura Inés Furlong	[2] [8]
20	Moustafa Ghanem	[15]
21	D. Grando	[1]
22	Harsha Gurulingappa	[14] [16] [17]
23	Peer Hasselmeyer	[11]
24	Sonja Holl	[19]
25	Rod D. Hose	[11]
26	Luigi Lo Iacono	[11]
27	Jimison Iavindrasana	[11]
28	Olga Ivchenko	[18]
29	Nicolas Jacq	[1] [6]
30	F. Joubert	[1]
31	Dimitrios Kalaitzopoulos	[15]
32	Vinod Kasam	[1] [6] [12] [15]
33	Roman Klinger	[2] [9] [13] [14] [16] [17]
34	Corinna Kolárik	[4] [7] [9] [13]
35	Ralph Krieger	[7]
36	Kai Kumpf	[11]
37	A. I. Louw	[1]
38	Eric Maréchal	[1]
39	Heinz-Theodor Mevissen	[2] [7] [14] [16] [17]
40	Bob Moore	[11]
41	Bernd Müller	[14] [16] [17] [18]
42	Emmanuel Müller	[7]
43	Henning Müller	[11]
44	Baldomero Oliva (Baldo Oliva)	[10]
45	Philippe Ortet	[1]
46	Hariharan Rajasekaran	[11]
47	Roelof Risselada	[10]
48	Sylvaine Roy	[1]
49	David Ruau	[7]
50	Aurelio Ruiz	[3]
51	Ferran Sanz	[2] [8] [10]
52	Thomas Seidl	[7]
53	Mohammad Shahid	[18]
54	Miriam C. J. M. Sturkenboom	[10]
55	Paul E. Summers	[11]
56	Yongjian Wang	[15]
57	G. Wells	[1]
58	Antje Wolf	[15] [18]
59	Erfan Younesi	[12] [18]
60	Martin Zenke	[7]
61	Marc Zimmermann	[1] [4] [5]
62	Olav Zimmermann	[19]

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