Charlie Hodgman

T. Charles Hodgman

	2012
22		Jianyong Sun, Jonathan M. Garibaldi, Charlie Hodgman: Parameter Estimation Using Metaheuristics in Systems Biology: A Comprehensive Review. IEEE/ACM Trans. Comput. Biology Bioinform. 9(1): 185-202 (2012)
	2011
21		Artem Lysenko, Michael Defoin-Platel, Keywan Hassani-Pak, Jan Taubert, Charlie Hodgman, Christopher J. Rawlings, Mansoor Saqi: Assessing the functional coherence of modules found in multiple-evidence networks from Arabidopsis. BMC Bioinformatics 12: 203 (2011)
	2009
20		Graham J. Hickman, Charlie Hodgman: Inference of Gene Regulatory Networks Using Boolean-Network Inference Methods. J. Bioinformatics and Computational Biology 7(6): 1013-1029 (2009)
	2008
19		Victor G. Levitsky, Elena V. Ignatieva, Eugenia Aman, Tatyana I. Merkulova, Nikolay A. Kolchanov, T. Charles Hodgman: Genetic algorithm and optimized weight matrix application for peroxisome proliferator response elements recognition: Prerequisites of accuracy growth for wide genome research. Intell. Data Anal. 12(5): 513-526 (2008)
	2007
18		Victor G. Levitsky, Elena V. Ignatieva, Elena A. Ananko, Igor I. Turnaev, Tatyana I. Merkulova, Nikolay A. Kolchanov, T. Charles Hodgman: Effective transcription factor binding site prediction using a combination of optimization, a genetic algorithm and discriminant analysis to capture distant interactions. BMC Bioinformatics 8: (2007)
17		Charlie Hodgman: Integrative biology - the way forward. Briefings in Bioinformatics 8(4): 208-209 (2007)
16		Nikolay A. Kolchanov, Tatyana I. Merkulova, Elena V. Ignatieva, Elena A. Ananko, Dmitry Yu. Oshchepkov, Victor G. Levitsky, Gennady V. Vasiliev, Nataly V. Klimova, Vasily M. Merkulov, T. Charles Hodgman: Combined experimental and computational approaches to study the regulatory elements in eukaryotic genes. Briefings in Bioinformatics 8(4): 266-274 (2007)
	2006
15		T. Charles Hodgman, Y. Ugartechea-Chirino, G. Tansley, I. Dryden: The implications for Bioinformatics of integration across physical scales. J. Integrative Bioinformatics 3(2): (2006)
14		Zheng Rong Yang, Jonathan Dry, Rebecca Thomson, T. Charles Hodgman: A bio-basis function neural network for protein peptide cleavage activity characterisation. Neural Networks 19(4): 401-407 (2006)
	2004
13		Andrew B. Horne, T. Charles Hodgman, Hugh D. Spence, Andrew R. Dalby: Constructing an enzyme-centric view of metabolism. Bioinformatics 20(13): 2050-2055 (2004)
12		Charlie Hodgman: Editorial: The informatics of post-translational modification and its implications for systems biology. Briefings in Bioinformatics 5(2): 104-106 (2004)
	2003
11		Rebecca Thomson, T. Charles Hodgman, Zheng Rong Yang, Austin K. Doyle: Characterizing proteolytic cleavage site activity using bio-basis function neural networks. Bioinformatics 19(14): 1741-1747 (2003)
10		Michael Hucka, Andrew Finney, Herbert M. Sauro, H. Bolouri, John C. Doyle, Hiroaki Kitano, Adam P. Arkin, Benjamin J. Bornstein, D. Bray, A. Cornish-Bowden, Autumn A. Cuellar, Serge Dronov, Ernst Dieter Gilles, Martin Ginkel, Victoria Gor, Igor Goryanin, W. J. Hedley, T. Charles Hodgman, J. H. Hofmeyr, Peter J. Hunter, Nick S. Juty, J. L. Kasberger, Andreas Kremling, Ursula Kummer, Nicolas Le Novère, Leslie M. Loew, D. Lucio, Pedro Mendes, E. Minch, Eric Mjolsness, Yoichi Nakayama, M. R. Nelson, Poul M. F. Nielsen, T. Sakurada, James C. Schaff, Bruce E. Shapiro, Thomas Simon Shimizu, Hugh D. Spence, Jörg Stelling, Koichi Takahashi, Masaru Tomita, J. Wagner, J. Wang: The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models. Bioinformatics 19(4): 524-531 (2003)
	2001
9		Nikolay A. Kolchanov, Charlie Hodgman: The 2nd international conference on the Bioinformatics of Genome Regulation and Structure (BGRS-2000), Novosibirsk, August 2000. Bioinformatics 17(11): 997 (2001)
8		Nick S. Juty, Hugh D. Spence, Hans R. Hotz, Haizhou Tang, Igor Goryanin, T. Charles Hodgman: Simultaneous Modelling of Metabolic, Genetic and Product-interaction Networks. Briefings in Bioinformatics 2(3): 223-232 (2001)
	2000
7		T. Charles Hodgman: A historical perspective on gene/protein functional assignment. Bioinformatics 16(1): 10-15 (2000)
	1999
6		Karen Eilbeck, Andy Brass, Norman W. Paton, Charlie Hodgman: INTERACT: An Object Oriented Protein-Protein Interaction Database. ISMB 1999: 87-94
5		Igor Goryanin, T. Charles Hodgman, Evgeni Selkov: Mathematical simulation and analysis of cellular metabolism and regulation. Bioinformatics 15(9): 749-758 (1999)
	1998
4		S. Taylor, T. Charles Hodgman, C. B. Littler, Roger A. Sayle, R. W. Gill, M. D. Oxer, C. H. O'Donnell, Andrew Lyall: Automated management of gene discovery projects. Bioinformatics 14(2): 217-218 (1998)
	1997
3		R. W. Gill, T. Charles Hodgman, C. B. Littler, M. D. Oxer, D. S. Montgomery, S. Taylor, P. Sanseau: A new dynamic tool to perform assembly of expressed sequence tags (ESTs). Computer Applications in the Biosciences 13(4): 453-457 (1997)
	1989
2		T. Charles Hodgman: The elucidation of protein function by sequence motif analysis. Computer Applications in the Biosciences 5(1): 1-13 (1989)
	1986
1		T. Charles Hodgman: The elucidation of protein function from its amino acid sequence. Computer Applications in the Biosciences 2(3): 181-187 (1986)

Coauthor Index

1	Eugenia Aman	[19]
2	Elena A. Ananko	[16] [18]
3	Adam P. Arkin	[10]
4	H. Bolouri	[10]
5	Benjamin J. Bornstein	[10]
6	Andy Brass	[6]
7	D. Bray	[10]
8	A. Cornish-Bowden	[10]
9	Autumn A. Cuellar	[10]
10	Andrew R. Dalby	[13]
11	Michael Defoin-Platel	[21]
12	Austin K. Doyle	[11]
13	John Doyle (John C. Doyle)	[10]
14	Serge Dronov	[10]
15	Jonathan Dry	[14]
16	I. Dryden	[15]
17	Karen Eilbeck	[6]
18	Andrew Finney	[10]
19	Jonathan M. Garibaldi	[22]
20	R. W. Gill	[3] [4]
21	Ernst Dieter Gilles	[10]
22	Martin Ginkel	[10]
23	Victoria Gor	[10]
24	Igor Goryanin	[5] [8] [10]
25	Keywan Hassani-Pak	[21]
26	W. J. Hedley	[10]
27	Graham J. Hickman	[20]
28	J. H. Hofmeyr	[10]
29	Andrew B. Horne	[13]
30	Hans R. Hotz	[8]
31	Michael Hucka	[10]
32	Peter J. Hunter	[10]
33	Elena V. Ignatieva	[16] [18] [19]
34	Nick S. Juty	[8] [10]
35	J. L. Kasberger	[10]
36	Hiroaki Kitano	[10]
37	Nataly V. Klimova	[16]
38	Nikolay A. Kolchanov	[9] [16] [18] [19]
39	Andreas Kremling	[10]
40	Ursula Kummer	[10]
41	Victor G. Levitsky	[16] [18] [19]
42	C. B. Littler	[3] [4]
43	Leslie M. Loew	[10]
44	D. Lucio	[10]
45	Andrew Lyall	[4]
46	Artem Lysenko	[21]
47	Pedro Mendes	[10]
48	Vasily M. Merkulov	[16]
49	Tatyana I. Merkulova	[16] [18] [19]
50	E. Minch	[10]
51	Eric Mjolsness	[10]
52	D. S. Montgomery	[3]
53	Yoichi Nakayama	[10]
54	M. R. Nelson	[10]
55	Poul M. F. Nielsen	[10]
56	Nicolas Le Novère	[10]
57	C. H. O'Donnell	[4]
58	Dmitry Yu. Oshchepkov	[16]
59	M. D. Oxer	[3] [4]
60	Norman W. Paton	[6]
61	Christopher J. Rawlings	[21]
62	T. Sakurada	[10]
63	P. Sanseau	[3]
64	Mansoor Saqi	[21]
65	Herbert M. Sauro	[10]
66	Roger A. Sayle	[4]
67	James C. Schaff	[10]
68	Evgeni Selkov	[5]
69	Bruce E. Shapiro	[10]
70	Thomas Simon Shimizu	[10]
71	Hugh D. Spence	[8] [10] [13]
72	Jörg Stelling	[10]
73	Jianyong Sun	[22]
74	Koichi Takahashi	[10]
75	Haizhou Tang	[8]
76	G. Tansley	[15]
77	Jan Taubert	[21]
78	S. Taylor	[3] [4]
79	Rebecca Thomson	[11] [14]
80	Masaru Tomita	[10]
81	Igor I. Turnaev	[18]
82	Y. Ugartechea-Chirino	[15]
83	Gennady V. Vasiliev	[16]
84	J. Wagner	[10]
85	J. Wang	[10]
86	Zheng Rong Yang	[11] [14]

Colors in the list of coauthors

Last update Thu May 31 18:55:10 2012 CET by the DBLP Team — Data released under the ODC-BY 1.0 license — See also our legal information page