Javier Herrero

	2012
22		Christophe Dessimoz, Toni Gabaldón, David S. Roos, Erik L. L. Sonnhammer, Javier Herrero: Toward community standards in the quest for orthologs. Bioinformatics 28(6): 900-904 (2012)
21		Paul Flicek, M. Ridwan Amode, Daniel Barrell, Kathryn Beal, Simon Brent, Denise Carvalho-Silva, Peter Clapham, Guy Coates, Susan Fairley, Stephen Fitzgerald, Laurent Gil, Leo Gordon, Maurice Hendrix, Thibaut Hourlier, Nathan Johnson, Andreas Kähäri, Damian Keefe, Stephen Keenan, Rhoda Kinsella, Monika Komorowska, Gautier Koscielny, Eugene Kulesha, Pontus Larsson, Ian Longden, William M. McLaren, Matthieu Muffato, Bert Overduin, Miguel Pignatelli, Bethan Pritchard, Harpreet Singh Riat, Graham R. S. Ritchie, Magali Ruffier, Michael Schuster, Daniel Sobral, Y. Amy Tang, Kieron Taylor, Stephen Trevanion, Jana Vandrovcova, Simon White, Mark Wilson, Steven P. Wilder, Bronwen L. Aken, Ewan Birney, Fiona Cunningham, Ian Dunham, Richard Durbin, Xosé M. Fernández-Suarez, Jennifer Harrow, Javier Herrero, Tim J. P. Hubbard, Anne Parker, Glenn Proctor, Giulietta Spudich, Jan Vogel, Andy Yates, Amonida Zadissa, Stephen M. J. Searle: Ensembl 2012. Nucleic Acids Research 40(Database-Issue): 84-90 (2012)
	2011
20		Paul Flicek, M. Ridwan Amode, Daniel Barrell, Kathryn Beal, Simon Brent, Yuan Chen, Peter Clapham, Guy Coates, Susan Fairley, Stephen Fitzgerald, Leo Gordon, Maurice Hendrix, Thibaut Hourlier, Nathan Johnson, Andreas Kähäri, Damian Keefe, Stephen Keenan, Rhoda Kinsella, Felix Kokocinski, Eugene Kulesha, Pontus Larsson, Ian Longden, William M. McLaren, Bert Overduin, Bethan Pritchard, Harpreet Singh Riat, Daniel Rios, Graham R. S. Ritchie, Magali Ruffier, Michael Schuster, Daniel Sobral, Giulietta Spudich, Y. Amy Tang, Stephen Trevanion, Jana Vandrovcova, Albert J. Vilella, Simon White, Steven P. Wilder, Amonida Zadissa, Jorge Zamora, Bronwen L. Aken, Ewan Birney, Fiona Cunningham, Ian Dunham, Richard Durbin, Xosé M. Fernández-Suarez, Javier Herrero, Tim J. P. Hubbard, Anne Parker, Glenn Proctor, Jan Vogel, Stephen M. J. Searle: Ensembl 2011. Nucleic Acids Research 39(Database-Issue): 800-806 (2011)
	2010
19		Jessica Severin, Kathryn Beal, Albert J. Vilella, Stephen Fitzgerald, Michael Schuster, Leo Gordon, Abel Ureta-Vidal, Paul Flicek, Javier Herrero: eHive: An Artificial Intelligence workflow system for genomic analysis. BMC Bioinformatics 11: 240 (2010)
18		Paul Flicek, Bronwen L. Aken, Benoit Ballester, Kathryn Beal, Eugene Bragin, Simon Brent, Yuan Chen, Peter Clapham, Guy Coates, Susan Fairley, Stephen Fitzgerald, Julio Fernandez-Banet, Leo Gordon, Stefan Gräf, Syed Haider, Martin Hammond, Kerstin Howe, Andrew M. Jenkinson, Nathan Johnson, Andreas Kähäri, Damian Keefe, Stephen Keenan, Rhoda Kinsella, Felix Kokocinski, Gautier Koscielny, Eugene Kulesha, Daniel Lawson, Ian Longden, Tim Massingham, William M. McLaren, Karine Megy, Bert Overduin, Bethan Pritchard, Daniel Rios, Magali Ruffier, Michael Schuster, Guy Slater, Damian Smedley, Giulietta Spudich, Y. Amy Tang, Stephen Trevanion, Albert J. Vilella, Jan Vogel, Simon White, Steven P. Wilder, Amonida Zadissa, Ewan Birney, Fiona Cunningham, Ian Dunham, Richard Durbin, Xosé M. Fernández-Suarez, Javier Herrero, Tim J. P. Hubbard, Anne Parker, Glenn Proctor, James Smith, Stephen M. J. Searle: Ensembl's 10th year. Nucleic Acids Research 38(Database-Issue): 557-562 (2010)
17		Paul J. Kersey, Daniel Lawson, Ewan Birney, P. S. Derwent, M. Haimel, Javier Herrero, Stephen Keenan, Arnaud Kerhornou, Gautier Koscielny, Andreas Kähäri, Rhoda Kinsella, Eugene Kulesha, Uma Maheswari, Karine Megy, Michael Nuhn, Glenn Proctor, Daniel M. Staines, Franck Valentin, Albert J. Vilella, Andy Yates: Ensembl Genomes: Extending Ensembl across the taxonomic space. Nucleic Acids Research 38(Database-Issue): 563-569 (2010)
	2009
16		Benedict Paten, Javier Herrero, Kathryn Beal, Ewan Birney: Sequence progressive alignment, a framework for practical large-scale probabilistic consistency alignment. Bioinformatics 25(3): 295-301 (2009)
15		Tim J. P. Hubbard, Bronwen L. Aken, Sarah C. Ayling, Benoit Ballester, Kathryn Beal, Eugene Bragin, Simon Brent, Yuan Chen, Peter Clapham, Laura Clarke, Guy Coates, Susan Fairley, Stephen Fitzgerald, Julio Fernandez-Banet, Leo Gordon, Stefan Gräf, Syed Haider, Martin Hammond, Richard C. G. Holland, Kevin L. Howe, Andrew M. Jenkinson, Nathan Johnson, Andreas Kähäri, Damian Keefe, Stephen Keenan, Rhoda Kinsella, Felix Kokocinski, Eugene Kulesha, Daniel Lawson, Ian Longden, Karine Megy, Patrick Meidl, Bert Overduin, Anne Parker, Bethan Pritchard, Daniel Rios, Michael Schuster, Guy Slater, Damian Smedley, William Spooner, Giulietta Spudich, S. Trevanion, Albert J. Vilella, Jan Vogel, Simon White, Steven P. Wilder, Arek Zadissa, Ewan Birney, Fiona Cunningham, Val Curwen, Richard Durbin, Xosé M. Fernández-Suarez, Javier Herrero, Arek Kasprzyk, Glenn Proctor, James Smith, Stephen M. J. Searle, Paul Flicek: Ensembl 2009. Nucleic Acids Research 37(Database-Issue): 690-697 (2009)
	2008
14		Paul Flicek, Bronwen L. Aken, Kathryn Beal, Benoit Ballester, Mario Cáccamo, Yuan Chen, Laura Clarke, Guy Coates, Fiona Cunningham, Tim Cutts, Thomas A. Down, S. C. Dyer, T. Eyre, Stephen Fitzgerald, Julio Fernandez-Banet, Stefan Gräf, Syed Haider, Martin Hammond, Richard C. G. Holland, Kevin L. Howe, Kerstin Howe, Nathan Johnson, Andrew M. Jenkinson, Andreas Kähäri, Damian Keefe, Felix Kokocinski, Eugene Kulesha, Daniel Lawson, Ian Longden, Karine Megy, Patrick Meidl, Bert Overduin, Anne Parker, Bethan Pritchard, Andreas Prlic, S. Rice, Daniel Rios, Michael Schuster, I. Sealy, Guy Slater, Damian Smedley, Giulietta Spudich, S. Trevanion, Albert J. Vilella, Jan Vogel, Simon White, M. Wood, Ewan Birney, Tony Cox, Val Curwen, Richard Durbin, Xosé M. Fernández-Suarez, Javier Herrero, Tim J. P. Hubbard, Arek Kasprzyk, Glenn Proctor, James Smith, Abel Ureta-Vidal, Stephen M. J. Searle: Ensembl 2008. Nucleic Acids Research 36(Database-Issue): 707-714 (2008)
	2007
13		Tim J. P. Hubbard, Bronwen L. Aken, Kathryn Beal, Benoit Ballester, Mario Cáccamo, Yuan Chen, Laura Clarke, Guy Coates, Fiona Cunningham, Tim Cutts, Thomas Down, S. C. Dyer, Stephen Fitzgerald, Julio Fernandez-Banet, Stefan Gräf, Syed Haider, Martin Hammond, Javier Herrero, Richard C. G. Holland, Kevin L. Howe, Kerstin Howe, Nathan Johnson, Andreas Kähäri, Damian Keefe, Felix Kokocinski, Eugene Kulesha, Daniel Lawson, Ian Longden, Craig Melsopp, Karine Megy, Patrick Meidl, Bert Overduin, Anne Parker, Andreas Prlic, S. Rice, Daniel Rios, Michael Schuster, I. Sealy, Jessica Severin, Guy Slater, Damian Smedley, Giulietta Spudich, S. Trevanion, Albert J. Vilella, Jan Vogel, Simon White, M. Wood, Tony Cox, Val Curwen, Richard Durbin, Xosé M. Fernández-Suarez, Paul Flicek, Arek Kasprzyk, Glenn Proctor, Stephen M. J. Searle, James Smith, Abel Ureta-Vidal, Ewan Birney: Ensembl 2007. Nucleic Acids Research 35(Database-Issue): 610-617 (2007)
	2006
12		Ewan Birney, T. Daniel Andrews, Mario Cáccamo, Yuan Chen, Laura Clarke, Guy Coates, Tony Cox, Fiona Cunningham, Val Curwen, Tim Cutts, Thomas Down, Richard Durbin, Xosé M. Fernández-Suarez, Paul Flicek, Stefan Gräf, Martin Hammond, Javier Herrero, Kevin L. Howe, Vivek Iyer, K. Jekosch, Andreas Kähäri, Arek Kasprzyk, Damian Keefe, Felix Kokocinski, Eugene Kulesha, D. London, Ian Longden, Craig Melsopp, Patrick Meidl, Bert Overduin, Anne Parker, Glenn Proctor, Andreas Prlic, Mark Rae, Daniel Rios, Seth Redmond, Michael Schuster, I. Sealy, Stephen M. J. Searle, Jessica Severin, Guy Slater, Damian Smedley, James Smith, Arne Stabenau, Jim Stalker, S. Trevanion, Abel Ureta-Vidal, Jan Vogel, Simon White, Cara Woodwark, Tim J. P. Hubbard: Ensembl 2006. Nucleic Acids Research 34(Database-Issue): 556-561 (2006)
11		David Montaner, Joaquín Tárraga, Jaime Huerta-Cepas, Jordi Burguet-Castell, Juan M. Vaquerizas, Lucía Conde, Pablo Minguez, Javier Vera, Sach Mukherjee, Joan Valls, Miguel A. G. Pujana, Eva Alloza, Javier Herrero, Fátima Al-Shahrour, Joaquín Dopazo: Next station in microarray data analysis: GEPAS. Nucleic Acids Research 34(Web-Server-Issue): 486-491 (2006)
	2005
10		Tim J. P. Hubbard, D. Andrews, Mario Cáccamo, Graham Cameron, Yuan Chen, Michele E. Clamp, Laura Clarke, Guy Coates, Tony Cox, Fiona Cunningham, Val Curwen, Tim Cutts, Thomas Down, Richard Durbin, Xosé M. Fernández-Suarez, James Gilbert, Martin Hammond, Javier Herrero, H. Hotz, Kevin L. Howe, Vivek Iyer, K. Jekosch, Andreas Kähäri, Arek Kasprzyk, Damian Keefe, Stephen Keenan, Felix Kokocinski, D. London, Ian Longden, Graham P. McVicker, Craig Melsopp, Patrick Meidl, Simon C. Potter, Glenn Proctor, Mark Rae, Daniel Rios, Michael Schuster, Stephen M. J. Searle, Jessica Severin, Guy Slater, Damian Smedley, James Smith, William Spooner, Arne Stabenau, Jim Stalker, R. Storey, S. Trevanion, Abel Ureta-Vidal, Jan Vogel, Simon White, Cara Woodwark, Ewan Birney: Ensembl 2005. Nucleic Acids Research 33(Database-Issue): 447-453 (2005)
9		Juan M. Vaquerizas, Lucía Conde, Patricio Yankilevich, Amaya Cabezón, Pablo Minguez, Ramón Díaz-Uriarte, Fátima Al-Shahrour, Javier Herrero, Joaquín Dopazo: GEPAS, an experiment-oriented pipeline for the analysis of microarray gene expression data. Nucleic Acids Research 33(Web-Server-Issue): 616-620 (2005)
	2004
8		Javier Herrero, Juan M. Vaquerizas, Fátima Al-Shahrour, Lucía Conde, Álvaro Mateos, Javier Santoyo, Ramón Díaz-Uriarte, Joaquín Dopazo: New Challenges in Gene Expression Data Analysis and the Extended GEPAS. Spanish Bioinformatics Conference 2004: 1-5
7		Javier Herrero, Juan M. Vaquerizas, Fátima Al-Shahrour, Lucía Conde, Álvaro Mateos, Javier Santoyo, Ramón Díaz-Uriarte, Joaquín Dopazo: New challenges in gene expression data analysis and the extended GEPAS. Nucleic Acids Research 32(Web-Server-Issue): 485-491 (2004)
	2003
6		Michal Karzynski, Álvaro Mateos, Javier Herrero, Joaquín Dopazo: Using a Genetic Algorithm and a Perceptron for Feature Selection and Supervised Class Learning in DNA Microarray Data. Artif. Intell. Rev. 20(1-2): 39-51 (2003)
5		Javier Herrero, Ramón Díaz-Uriarte, Joaquín Dopazo: Gene expression data preprocessing. Bioinformatics 19(5): 655-656 (2003)
4		Javier Herrero, Fátima Al-Shahrour, Ramón Díaz-Uriarte, Álvaro Mateos, Juan M. Vaquerizas, Javier Santoyo, Joaquín Dopazo: GEPAS: a web-based resource for microarray gene expression data analysis. Nucleic Acids Research 31(13): 3461-3467 (2003)
3		Lucía Conde, Álvaro Mateos, Javier Herrero, Joaquín Dopazo: Improved Class Prediction in DNA Microarray Gene Expression Data by Unsupervised Reduction of the Dimensionality followed by Supervised Learning with a Perceptron. VLSI Signal Processing 35(3): 245-253 (2003)
	2002
2		Álvaro Mateos, Javier Herrero, Joaquín Dopazo: Using Perceptrons for Supervised Classification of DNA Microarray Samples: Obtaining the Optimal Level of Information and Finding Differentially Expressed Genes. ICANN 2002: 577-582
	2001
1		Javier Herrero, Alfonso Valencia, Joaquín Dopazo: A hierarchical unsupervised growing neural network for clustering gene expression patterns. Bioinformatics 17(1): 126-136 (2001)

Coauthor Index

1	Bronwen L. Aken	[13] [14] [15] [18] [20] [21]
2	Fátima Al-Shahrour	[4] [7] [8] [9] [11]
3	Eva Alloza	[11]
4	M. Ridwan Amode	[20] [21]
5	D. Andrews	[10]
6	T. Daniel Andrews	[12]
7	Sarah C. Ayling	[15]
8	Benoit Ballester	[13] [14] [15] [18]
9	Daniel Barrell	[20] [21]
10	Kathryn Beal	[13] [14] [15] [16] [18] [19] [20] [21]
11	Ewan Birney	[10] [12] [13] [14] [15] [16] [17] [18] [20] [21]
12	Eugene Bragin	[15] [18]
13	Simon Brent	[15] [18] [20] [21]
14	Jordi Burguet-Castell	[11]
15	Amaya Cabezón	[9]
16	Mario Cáccamo	[10] [12] [13] [14]
17	Graham Cameron	[10]
18	Denise Carvalho-Silva	[21]
19	Yuan Chen	[10] [12] [13] [14] [15] [18] [20]
20	Michele E. Clamp	[10]
21	Peter Clapham	[15] [18] [20] [21]
22	Laura Clarke	[10] [12] [13] [14] [15]
23	Guy Coates	[10] [12] [13] [14] [15] [18] [20] [21]
24	Lucía Conde	[3] [7] [8] [9] [11]
25	Antony Cox (Tony Cox)	[10] [12] [13] [14]
26	Fiona Cunningham	[10] [12] [13] [14] [15] [18] [20] [21]
27	Val Curwen	[10] [12] [13] [14] [15]
28	Tim Cutts	[10] [12] [13] [14]
29	P. S. Derwent	[17]
30	Christophe Dessimoz	[22]
31	Ramón Díaz-Uriarte	[4] [5] [7] [8] [9]
32	Joaquín Dopazo	[1] [2] [3] [4] [5] [6] [7] [8] [9] [11]
33	Thomas A. Down (Thomas Down)	[10] [12] [13] [14]
34	Ian Dunham	[18] [20] [21]
35	Richard Durbin	[10] [12] [13] [14] [15] [18] [20] [21]
36	S. C. Dyer	[13] [14]
37	T. Eyre	[14]
38	Susan Fairley	[15] [18] [20] [21]
39	Julio Fernandez-Banet	[13] [14] [15] [18]
40	Xosé M. Fernández-Suarez	[10] [12] [13] [14] [15] [18] [20] [21]
41	Stephen Fitzgerald	[13] [14] [15] [18] [19] [20] [21]
42	Paul Flicek	[12] [13] [14] [15] [18] [19] [20] [21]
43	Toni Gabaldón	[22]
44	Laurent Gil	[21]
45	James Gilbert	[10]
46	Leo Gordon	[15] [18] [19] [20] [21]
47	Stefan Gräf	[12] [13] [14] [15] [18]
48	Syed Haider	[13] [14] [15] [18]
49	M. Haimel	[17]
50	Martin Hammond	[10] [12] [13] [14] [15] [18]
51	Jennifer Harrow	[21]
52	Maurice Hendrix	[20] [21]
53	Richard C. G. Holland	[13] [14] [15]
54	H. Hotz	[10]
55	Thibaut Hourlier	[20] [21]
56	Kerstin Howe	[13] [14] [18]
57	Kevin L. Howe	[10] [12] [13] [14] [15]
58	Tim J. P. Hubbard	[10] [12] [13] [14] [15] [18] [20] [21]
59	Jaime Huerta-Cepas	[11]
60	Vivek Iyer	[10] [12]
61	K. Jekosch	[10] [12]
62	Andrew M. Jenkinson	[14] [15] [18]
63	Nathan Johnson	[13] [14] [15] [18] [20] [21]
64	Andreas Kähäri	[10] [12] [13] [14] [15] [17] [18] [20] [21]
65	Michal Karzynski	[6]
66	Arek Kasprzyk	[10] [12] [13] [14] [15]
67	Damian Keefe	[10] [12] [13] [14] [15] [18] [20] [21]
68	Stephen Keenan	[10] [15] [17] [18] [20] [21]
69	Arnaud Kerhornou	[17]
70	Paul J. Kersey	[17]
71	Rhoda Kinsella	[15] [17] [18] [20] [21]
72	Felix Kokocinski	[10] [12] [13] [14] [15] [18] [20]
73	Monika Komorowska	[21]
74	Gautier Koscielny	[17] [18] [21]
75	Eugene Kulesha	[12] [13] [14] [15] [17] [18] [20] [21]
76	Pontus Larsson	[20] [21]
77	Daniel Lawson	[13] [14] [15] [17] [18]
78	D. London	[10] [12]
79	Ian Longden	[10] [12] [13] [14] [15] [18] [20] [21]
80	Uma Maheswari	[17]
81	Tim Massingham	[18]
82	Álvaro Mateos	[2] [3] [4] [6] [7] [8]
83	William M. McLaren	[18] [20] [21]
84	Graham P. McVicker	[10]
85	Karine Megy	[13] [14] [15] [17] [18]
86	Patrick Meidl	[10] [12] [13] [14] [15]
87	Craig Melsopp	[10] [12] [13]
88	Pablo Minguez	[9] [11]
89	David Montaner	[11]
90	Matthieu Muffato	[21]
91	Sach Mukherjee	[11]
92	Michael Nuhn	[17]
93	Bert Overduin	[12] [13] [14] [15] [18] [20] [21]
94	Anne Parker	[12] [13] [14] [15] [18] [20] [21]
95	Benedict Paten	[16]
96	Miguel Pignatelli	[21]
97	Simon C. Potter	[10]
98	Bethan Pritchard	[14] [15] [18] [20] [21]
99	Andreas Prlic	[12] [13] [14]
100	Glenn Proctor	[10] [12] [13] [14] [15] [17] [18] [20] [21]
101	Miguel A. G. Pujana	[11]
102	Mark Rae	[10] [12]
103	Seth Redmond	[12]
104	Harpreet Singh Riat	[20] [21]
105	S. Rice	[13] [14]
106	Daniel Rios	[10] [12] [13] [14] [15] [18] [20]
107	Graham R. S. Ritchie	[20] [21]
108	David S. Roos	[22]
109	Magali Ruffier	[18] [20] [21]
110	Javier Santoyo	[4] [7] [8]
111	Michael Schuster	[10] [12] [13] [14] [15] [18] [19] [20] [21]
112	I. Sealy	[12] [13] [14]
113	Stephen M. J. Searle	[10] [12] [13] [14] [15] [18] [20] [21]
114	Jessica Severin	[10] [12] [13] [19]
115	Guy Slater	[10] [12] [13] [14] [15] [18]
116	Damian Smedley	[10] [12] [13] [14] [15] [18]
117	James Smith	[10] [12] [13] [14] [15] [18]
118	Daniel Sobral	[20] [21]
119	Erik L. L. Sonnhammer	[22]
120	William Spooner	[10] [15]
121	Giulietta Spudich	[13] [14] [15] [18] [20] [21]
122	Arne Stabenau	[10] [12]
123	Daniel M. Staines	[17]
124	Jim Stalker	[10] [12]
125	R. Storey	[10]
126	Y. Amy Tang	[18] [20] [21]
127	Joaquín Tárraga	[11]
128	Kieron Taylor	[21]
129	Stephen Trevanion (S. Trevanion)	[10] [12] [13] [14] [15] [18] [20] [21]
130	Abel Ureta-Vidal	[10] [12] [13] [14] [19]
131	Alfonso Valencia	[1]
132	Franck Valentin	[17]
133	Joan Valls	[11]
134	Jana Vandrovcova	[20] [21]
135	Juan M. Vaquerizas	[4] [7] [8] [9] [11]
136	Javier Vera	[11]
137	Albert J. Vilella	[13] [14] [15] [17] [18] [19] [20]
138	Jan Vogel	[10] [12] [13] [14] [15] [18] [20] [21]
139	Simon White	[10] [12] [13] [14] [15] [18] [20] [21]
140	Steven P. Wilder	[15] [18] [20] [21]
141	Mark Wilson	[21]
142	M. Wood	[13] [14]
143	Cara Woodwark	[10] [12]
144	Patricio Yankilevich	[9]
145	Andy Yates	[17] [21]
146	Amonida Zadissa	[18] [20] [21]
147	Arek Zadissa	[15]
148	Jorge Zamora	[20]

Last update Fri Jun 1 15:44:53 2012 CET by the DBLP Team — Data released under the ODC-BY 1.0 license — See also our legal information page