 | 2012 |
| 13 |  | Marco Punta,
Penny C. Coggill,
Ruth Y. Eberhardt,
Jaina Mistry,
John G. Tate,
Chris Boursnell,
Ningze Pang,
Kristoffer Forslund,
Goran Ceric,
Jody Clements,
Andreas Heger,
Liisa Holm,
Erik L. L. Sonnhammer,
Sean R. Eddy,
Alex Bateman,
Robert D. Finn:
The Pfam protein families database.
Nucleic Acids Research 40(Database-Issue): 290-301 (2012) |
| 2010 |
| 12 |  | Robert D. Finn,
Jaina Mistry,
John G. Tate,
Penny C. Coggill,
Andreas Heger,
Joanne E. Pollington,
O. Luke Gavin,
Prasad Gunasekaran,
Goran Ceric,
Kristoffer Forslund,
Liisa Holm,
Erik L. L. Sonnhammer,
Sean R. Eddy,
Alex Bateman:
The Pfam protein families database.
Nucleic Acids Research 38(Database-Issue): 211-222 (2010) |
| 2008 |
| 11 |  | Andreas Heger,
Chris P. Ponting:
OPTIC: orthologous and paralogous transcripts in clades.
Nucleic Acids Research 36(Database-Issue): 267-270 (2008) |
| 10 |  | Andreas Heger,
Eija Korpelainen,
Taavi Hupponen,
Kimmo Mattila,
Vesa Ollikainen,
Liisa Holm:
PairsDB atlas of protein sequence space.
Nucleic Acids Research 36(Database-Issue): 276-280 (2008) |
| 2007 |
| 9 |  | Andreas Heger,
Swapan Mallick,
Christopher Andrew Wilton,
Liisa Holm:
The global trace graph, a novel paradigm for searching protein sequence databases.
Bioinformatics 23(18): 2361-2367 (2007) |
| 2005 |
| 8 |  | Andreas Heger,
Christopher Andrew Wilton,
Ashwin Sivakumar,
Liisa Holm:
ADDA: a domain database with global coverage of the protein universe.
Nucleic Acids Research 33(Database-Issue): 188-191 (2005) |
| 2004 |
| 7 |  | Andreas Heger,
Michael Lappe,
Liisa Holm:
Accurate Detection of Very Sparse Sequence Motifs.
Journal of Computational Biology 11(5): 843-857 (2004) |
| 2003 |
| 6 |  | Andreas Heger,
Liisa Holm:
Sensitive pattern discovery with 'fuzzy' alignments of distantly related proteins.
ISMB (Supplement of Bioinformatics) 2003: 130-137 |
| 5 |  | Andreas Heger,
Michael Lappe,
Liisa Holm:
Accurate detection of very sparse sequence motifs.
RECOMB 2003: 139-147 |
| 2001 |
| 4 |  | Andreas Heger,
Liisa Holm:
Picasso: generating a covering set of protein family profiles.
Bioinformatics 17(3): 272-279 (2001) |
| 3 |  | Sabine Dietmann,
Jong Park,
Cédric Notredame,
Andreas Heger,
Michael Lappe,
Liisa Holm:
A fully automatic evolutionary classification of protein folds: Dali Domain Dictionary version 3.
Nucleic Acids Research 29(1): 55-57 (2001) |
| 2000 |
| 2 |  | Jong Park,
Sabine Dietmann,
Andreas Heger,
Liisa Holm:
Estimating the significance of sequence order in protein secondary structure and prediction.
Bioinformatics 16(11): 978-987 (2000) |
| 1 |  | Jong Park,
Liisa Holm,
Andreas Heger,
Cyrus Chothia:
RSDB: representative protein sequence databases have high information content.
Bioinformatics 16(5): 458-464 (2000) |