Yoshihide Hayashizaki

	2011
25		Yasumasa Kimura, Michiel J. L. de Hoon, Shintaro Aoki, Yuri Ishizu, Carsten O. Daub, Alexander Lezhava, Erik Arner, Yoshihide Hayashizaki, Yuki Kawai, Yasushi Kogo: Optimization of turn-back primers in isothermal amplification. BIBM Workshops 2011: 909-911
24		Timo Lassmann, Yoshihide Hayashizaki, Carsten O. Daub: SAMStat: monitoring biases in next generation sequencing data. Bioinformatics 27(1): 130-131 (2011)
23		Hideya Kawaji, Jessica Severin, Marina Lizio, Alistair R. R. Forrest, Erik van Nimwegen, Michael Rehli, Kate Schroder, Katharine M. Irvine, Harukazu Suzuki, Piero Carninci, Yoshihide Hayashizaki, Carsten O. Daub: Update of the FANTOM web resource: from mammalian transcriptional landscape to its dynamic regulation. Nucleic Acids Research 39(Database-Issue): 856-860 (2011)
22		Hiroshi Masuya, Yuko Makita, Norio Kobayashi, Koro Nishikata, Yuko Yoshida, Yoshiki Mochizuki, Koji Doi, Terue Takatsuki, Kazunori Waki, Nobuhiko Tanaka, Manabu Ishii, Akihiro Matsushima, Satoshi Takahashi, Atsushi Hijikata, Kouji Kozaki, Teiichi Furuichi, Hideya Kawaji, Shigeharu Wakana, Yukio Nakamura, Atsushi Yoshiki, Takehide Murata, Kaoru Fukami-Kobayashi, S. Sujatha Mohan, Osamu Ohara, Yoshihide Hayashizaki, Riichiro Mizoguchi, Yuichi Obata, Tetsuro Toyoda: The RIKEN integrated database of mammals. Nucleic Acids Research 39(Database-Issue): 861-870 (2011)
	2010
21		Erik Arner, Yoshihide Hayashizaki, Carsten O. Daub: NGSView: an extensible open source editor for next-generation sequencing data. Bioinformatics 26(1): 125-126 (2010)
	2009
20		Jessica C. Mar, Yasumasa Kimura, Kate Schroder, Katharine M. Irvine, Yoshihide Hayashizaki, Harukazu Suzuki, David A. Hume, John Quackenbush: Data-driven normalization strategies for high-throughput quantitative RT-PCR. BMC Bioinformatics 10: (2009)
19		Hideya Kawaji, Yoshihide Hayashizaki, Carsten O. Daub: SDRF2GRAPH - a visualization tool of a spreadsheet-based description of experimental processes. BMC Bioinformatics 10: (2009)
18		Takehiro Hashimoto, Michiel J. L. de Hoon, Sean M. Grimmond, Carsten O. Daub, Yoshihide Hayashizaki, Geoffrey J. Faulkner: Probabilistic resolution of multi-mapping reads in massively parallel sequencing data using MuMRescueLite. Bioinformatics 25(19): 2613-2614 (2009)
17		Timo Lassmann, Yoshihide Hayashizaki, Carsten O. Daub: TagDust - a program to eliminate artifacts from next generation sequencing data. Bioinformatics 25(21): 2839-2840 (2009)
	2007
16		Kazuro Shimokawa, Yuko Okamura-Oho, Takio Kurita, Martin C. Frith, Jun Kawai, Piero Carninci, Yoshihide Hayashizaki: Large-scale clustering of CAGE tag expression data. BMC Bioinformatics 8: (2007)
	2006
15		Manisha Brahmachary, Christian Schönbach, Liang Yang, Enli Huang, Sin Lam Tan, Rajesh Chowdhary, S. P. T. Krishnan, Chin-Yo Lin, David A. Hume, Chikatoshi Kai, Jun Kawai, Piero Carninci, Yoshihide Hayashizaki, Vladimir B. Bajic: Computational promoter analysis of mouse, rat and human antimicrobial peptide-coding genes. BMC Bioinformatics 7(S-5): (2006)
14		Alistair R. R. Forrest, Darrin F. Taylor, J. Lynn Fink, M. Milena Gongora, Cameron Flegg, Rohan D. Teasdale, Harukazu Suzuki, Mutsumi Kanamori, Chikatoshi Kai, Yoshihide Hayashizaki, Sean M. Grimmond: PhosphoregDB: The tissue and sub-cellular distribution of mammalian protein kinases and phosphatases. BMC Bioinformatics 7: 82 (2006)
13		J. Lynn Fink, Rajith N. Aturaliya, Melissa J. Davis, Fasheng Zhang, Kelly Hanson, Melvena S. Teasdale, Chikatoshi Kai, Jun Kawai, Piero Carninci, Yoshihide Hayashizaki, Rohan D. Teasdale: LOCATE: a mouse protein subcellular localization database. Nucleic Acids Research 34(Database-Issue): 213-217 (2006)
12		Hideya Kawaji, Takeya Kasukawa, Shiro Fukuda, Shintaro Katayama, Chikatoshi Kai, Jun Kawai, Piero Carninci, Yoshihide Hayashizaki: CAGE Basic/Analysis Databases: the CAGE resource for comprehensive promoter analysis. Nucleic Acids Research 34(Database-Issue): 632-636 (2006)
	2005
11		Noriyuki Kitagawa, Takanori Washio, Shunichi Kosugi, Tomoya Yamashita, Kenji Higashi, Hiroshi Yanagawa, Kenichi Higo, Koji Satoh, Yasuhiro Ohtomo, Tomomi Sunako, Kazuo Murakami, Kenichi Matsubara, Jun Kawai, Piero Carninci, Yoshihide Hayashizaki, Shoshi Kikuchi, Masaru Tomita: Computational analysis suggests that alternative first exons are involved in tissue-specific transcription in rice (Oryza sativa). Bioinformatics 21(9): 1758-1763 (2005)
10		Ken C. Pang, Stuart Stephen, Pär G. Engström, Khairina Tajul-Arifin, Weisan Chen, Claes Wahlestedt, Boris Lenhard, Yoshihide Hayashizaki, John S. Mattick: RNAdb - a comprehensive mammalian noncoding RNA database. Nucleic Acids Research 33(Database-Issue): 125-130 (2005)
	2004
9		Shintaro Katayama, Mutsumi Kanamori, Yoshihide Hayashizaki: Integrated analysis of the genome and the transcriptome by FANTOM. Briefings in Bioinformatics 5(3): 249-258 (2004)
8		Yutaka Suzuki, Riu Yamashita, Matsuyuki Shirota, Yuta Sakakibara, Joe Chiba, Junko Mizushima-Sugano, Alexander E. Kel, Takahiro Arakawa, Piero Carninci, Jun Kawai, Yoshihide Hayashizaki, Toshihisa Takagi, Kenta Nakai, Sumio Sugano: Large-scale collection and characterization of promoters of human and mouse genes. In Silico Biology 4: (2004)
7		Itoshi Nikaido, Chika Saito, Akiko Wakamoto, Yasuhiro Tomaru, Takahiro Arakawa, Yoshihide Hayashizaki, Yasushi Okazaki: EICO (Expression-based Imprint Candidate Organizer): finding disease-related imprinted genes. Nucleic Acids Research 32(Database-Issue): 548-551 (2004)
	2003
6		Rintaro Saito, Harukazu Suzuki, Yoshihide Hayashizaki: Construction of reliable protein-protein interaction networks with a new interaction generality measure. Bioinformatics 19(6): 756-763 (2003)
5		Takeya Kasukawa, Hidemasa Bono, Yoshihide Hayashizaki, Yasushi Okazaki, Hideo Matsuda: MaXML: mouse annotation XML. In Silico Biology 4: (2003)
	2002
4		Nobuyuki Kawagashira, Yasuhiro Ohtomo, Kazuo Murakami, Kenichi Matsubara, Jun Kawai, Piero Carninci, Yoshihide Hayashizaki, Shoshi Kikuchi: Wavelet Profiles: Their Application in Oryza sativa DNA Sequence Analysis. CSB 2002: 345-346
3		Hidemasa Bono, Takeya Kasukawa, Masaaki Furuno, Yoshihide Hayashizaki, Yasushi Okazaki: FANTOM DB: database of Functional Annotation of RIKEN Mouse cDNA Clones. Nucleic Acids Research 30(1): 116-118 (2002)
2		Hidemasa Bono, Takeya Kasukawa, Yoshihide Hayashizaki, Yasushi Okazaki: READ: RIKEN Expression Array Database. Nucleic Acids Research 30(1): 211-213 (2002)
1		Jean-Marie Buerstedde, Hiroshi Arakawa, Akira Watahiki, Piero Carninci, Yoshihide Hayashizaki, Bernhard Korn, Jiri Plachy: The DT40 web site: sampling and connecting the genes of a B cell line. Nucleic Acids Research 30(1): 230-231 (2002)

Coauthor Index

1	Shintaro Aoki	[25]
2	Hiroshi Arakawa	[1]
3	Takahiro Arakawa	[7] [8]
4	Erik Arner	[21] [25]
5	Rajith N. Aturaliya	[13]
6	Vladimir B. Bajic	[15]
7	Hidemasa Bono	[2] [3] [5]
8	Manisha Brahmachary	[15]
9	Jean-Marie Buerstedde	[1]
10	Piero Carninci	[1] [4] [8] [11] [12] [13] [15] [16] [23]
11	Weisan Chen	[10]
12	Joe Chiba	[8]
13	Rajesh Chowdhary	[15]
14	Carsten O. Daub	[17] [18] [19] [21] [23] [24] [25]
15	Melissa J. Davis	[13]
16	Koji Doi	[22]
17	Pär G. Engström	[10]
18	Geoffrey J. Faulkner	[18]
19	J. Lynn Fink	[13] [14]
20	Cameron Flegg	[14]
21	Alistair R. R. Forrest	[14] [23]
22	Martin C. Frith	[16]
23	Kaoru Fukami-Kobayashi	[22]
24	Shiro Fukuda	[12]
25	Teiichi Furuichi	[22]
26	Masaaki Furuno	[3]
27	M. Milena Gongora	[14]
28	Sean M. Grimmond	[14] [18]
29	Kelly Hanson	[13]
30	Takehiro Hashimoto	[18]
31	Kenji Higashi	[11]
32	Kenichi Higo	[11]
33	Atsushi Hijikata	[22]
34	Michiel J. L. de Hoon	[18] [25]
35	Enli Huang	[15]
36	David A. Hume	[15] [20]
37	Katharine M. Irvine	[20] [23]
38	Manabu Ishii	[22]
39	Yuri Ishizu	[25]
40	Chikatoshi Kai	[12] [13] [14] [15]
41	Mutsumi Kanamori	[9] [14]
42	Takeya Kasukawa	[2] [3] [5] [12]
43	Shintaro Katayama	[9] [12]
44	Nobuyuki Kawagashira	[4]
45	Jun Kawai	[4] [8] [11] [12] [13] [15] [16]
46	Yuki Kawai	[25]
47	Hideya Kawaji	[12] [19] [22] [23]
48	Alexander E. Kel	[8]
49	Shoshi Kikuchi	[4] [11]
50	Yasumasa Kimura	[20] [25]
51	Noriyuki Kitagawa	[11]
52	Norio Kobayashi	[22]
53	Yasushi Kogo	[25]
54	Bernhard Korn	[1]
55	Shunichi Kosugi	[11]
56	Kouji Kozaki	[22]
57	S. P. T. Krishnan	[15]
58	Takio Kurita	[16]
59	Timo Lassmann	[17] [24]
60	Boris Lenhard	[10]
61	Alexander Lezhava	[25]
62	Chin-Yo Lin	[15]
63	Marina Lizio	[23]
64	Yuko Makita	[22]
65	Jessica C. Mar	[20]
66	Hiroshi Masuya	[22]
67	Kenichi Matsubara	[4] [11]
68	Hideo Matsuda	[5]
69	Akihiro Matsushima	[22]
70	John S. Mattick	[10]
71	Riichiro Mizoguchi	[22]
72	Junko Mizushima-Sugano	[8]
73	Yoshiki Mochizuki	[22]
74	S. Sujatha Mohan	[22]
75	Kazuo Murakami	[4] [11]
76	Takehide Murata	[22]
77	Kenta Nakai	[8]
78	Yukio Nakamura	[22]
79	Itoshi Nikaido	[7]
80	Erik van Nimwegen	[23]
81	Koro Nishikata	[22]
82	Yuichi Obata	[22]
83	Osamu Ohara	[22]
84	Yasuhiro Ohtomo	[4] [11]
85	Yuko Okamura-Oho	[16]
86	Yasushi Okazaki	[2] [3] [5] [7]
87	Ken C. Pang	[10]
88	Jiri Plachy	[1]
89	John Quackenbush	[20]
90	Michael Rehli	[23]
91	Chika Saito	[7]
92	Rintaro Saito	[6]
93	Yuta Sakakibara	[8]
94	Koji Satoh	[11]
95	Christian Schönbach	[15]
96	Kate Schroder	[20] [23]
97	Jessica Severin	[23]
98	Kazuro Shimokawa	[16]
99	Matsuyuki Shirota	[8]
100	Stuart Stephen	[10]
101	Sumio Sugano	[8]
102	Tomomi Sunako	[11]
103	Harukazu Suzuki	[6] [14] [20] [23]
104	Yutaka Suzuki	[8]
105	Khairina Tajul-Arifin	[10]
106	Toshihisa Takagi	[8]
107	Satoshi Takahashi	[22]
108	Terue Takatsuki	[22]
109	Sin Lam Tan	[15]
110	Nobuhiko Tanaka	[22]
111	Darrin F. Taylor	[14]
112	Melvena S. Teasdale	[13]
113	Rohan D. Teasdale	[13] [14]
114	Yasuhiro Tomaru	[7]
115	Masaru Tomita	[11]
116	Tetsuro Toyoda	[22]
117	Claes Wahlestedt	[10]
118	Akiko Wakamoto	[7]
119	Shigeharu Wakana	[22]
120	Kazunori Waki	[22]
121	Takanori Washio	[11]
122	Akira Watahiki	[1]
123	Riu Yamashita	[8]
124	Tomoya Yamashita	[11]
125	Hiroshi Yanagawa	[11]
126	Liang Yang	[15]
127	Yuko Yoshida	[22]
128	Atsushi Yoshiki	[22]
129	Fasheng Zhang	[13]

Last update Fri Jun 1 15:44:53 2012 CET by the DBLP Team — Data released under the ODC-BY 1.0 license — See also our legal information page