 | 2012 |
| 14 |  | Lubomir D. Antonov,
Christian Andreetta,
Thomas Hamelryck:
An Efficient Parallel GPU Evaluation of Small Angle X-ray Scattering Profiles.
BIOINFORMATICS 2012: 102-108 |
| 13 |  | Tim Harder,
Mikael Borg,
Wouter Boomsma,
Peter Røgen,
Thomas Hamelryck:
Fast large-scale clustering of protein structures using Gauss integrals.
Bioinformatics 28(4): 510-515 (2012) |
| 2010 |
| 12 |  | Martin Paluszewski,
Thomas Hamelryck:
Mocapy++ - A toolkit for inference and learning in dynamic Bayesian networks.
BMC Bioinformatics 11: 126 (2010) |
| 11 |  | Tim Harder,
Wouter Boomsma,
Martin Paluszewski,
Jes Frellsen,
Kristoffer E. Johansson,
Thomas Hamelryck:
Beyond rotamers: a generative, probabilistic model of side chains in proteins.
BMC Bioinformatics 11: 306 (2010) |
| 10 |  | Kasper Stovgaard,
Christian Andreetta,
Jesper Ferkinghoff-Borg,
Thomas Hamelryck:
Calculation of accurate small angle X-ray scattering curves from coarse-grained protein models.
BMC Bioinformatics 11: 429 (2010) |
| 2009 |
| 9 |  | Francois Anton,
Thomas Hamelryck:
The Voronoi Diagram of Half-Balls and its Application to the Prediction of the 3D Structure of Proteins.
ISVD 2009: 263-264 |
| 8 |  | Peter J. A. Cock,
Tiago Antao,
Jeffrey T. Chang,
Brad A. Chapman,
Cymon J. Cox,
Andrew Dalke,
Iddo Friedberg,
Thomas Hamelryck,
Frank Kauff,
Bartek Wilczynski,
Michiel J. L. de Hoon:
Biopython: freely available Python tools for computational molecular biology and bioinformatics.
Bioinformatics 25(11): 1422-1423 (2009) |
| 7 |  | Jes Frellsen,
Ida Moltke,
Martin Thiim,
Kanti V. Mardia,
Jesper Ferkinghoff-Borg,
Thomas Hamelryck:
A Probabilistic Model of RNA Conformational Space.
PLoS Computational Biology 5(6): (2009) |
| 2007 |
| 6 |  | Kyoung-Jae Won,
Thomas Hamelryck,
Adam Prügel-Bennett,
Anders Krogh:
An evolutionary method for learning HMM structure: prediction of protein secondary structure.
BMC Bioinformatics 8: (2007) |
| 2006 |
| 5 |  | Martin Paluszewski,
Thomas Hamelryck,
Pawel Winter:
Reconstructing protein structure from solvent exposure using tabu search.
Algorithms for Molecular Biology 1: (2006) |
| 4 |  | Thomas Hamelryck,
John T. Kent,
Anders Krogh:
Sampling Realistic Protein Conformations Using Local Structural Bias.
PLoS Computational Biology 2(9): (2006) |
| 2005 |
| 3 |  | Kyoung-Jae Won,
Thomas Hamelryck,
Adam Prügel-Bennett,
Anders Krogh:
Evolving hidden Markov models for protein secondary structure prediction.
Congress on Evolutionary Computation 2005: 33-40 |
| 2 |  | Wouter Boomsma,
Thomas Hamelryck:
Full cyclic coordinate descent: solving the protein loop closure problem in Calpha space.
BMC Bioinformatics 6: 159 (2005) |
| 2003 |
| 1 |  | Thomas Hamelryck,
Bernard Manderick:
PDB file parser and structure class implemented in Python.
Bioinformatics 19(17): 2308-2310 (2003) |