M. Michael Gromiha

	2012
54		De-Shuang Huang, Yong Gan, Phalguni Gupta, M. Michael Gromiha: Advanced Intelligent Computing Theories and Applications. With Aspects of Artificial Intelligence - 7th International Conference, ICIC 2011, Zhengzhou, China, August 11-14, 2011, Revised Selected Papers Springer 2012
53		Liang-Tsung Huang, M. Michael Gromiha: Real value prediction of protein folding rate change upon point mutation. Journal of Computer-Aided Molecular Design 26(3): 339-347 (2012)
52		Harinder Singh, Jagat Singh Chauhan, M. Michael Gromiha, Gajendra P. S. Raghava: ccPDB: compilation and creation of data sets from Protein Data Bank. Nucleic Acids Research 40(Database-Issue): 486-489 (2012)
	2011
51		M. Michael Gromiha, R. Sowdhamini, Kazuhiko Fukui: Structure-Function Relationship in Olfactory Receptors. ICIC (3) 2011: 618-623
50		Shu-An Chen, Yu-Yen Ou, Tzong-Yi Lee, M. Michael Gromiha: Prediction of transporter targets using efficient RBF networks with PSSM profiles and biochemical properties. Bioinformatics 27(15): 2062-2067 (2011)
	2010
49		M. Michael Gromiha, N. Saranya, Samuel Selvaraj, B. Jayaram, Kazuhiko Fukui: Sequence and structural features of binding site residues in protein-protein complexes. BIBM 2010: 53-56
48		M. Michael Gromiha, Samuel Selvaraj, B. Jayaram, Kazuhiko Fukui: Identification and Analysis of Binding Site Residues in Protein Complexes: Energy Based Approach. ICIC (1) 2010: 626-633
47		Shu-An Chen, Yu-Yen Ou, M. Michael Gromiha: Topology Prediction of alpha-Helical and beta-Barrel Transmembrane Proteins Using RBF Networks. ICIC (1) 2010: 642-649
46		Liang-Tsung Huang, M. Michael Gromiha: First insight into the prediction of protein folding rate change upon point mutation. Bioinformatics 26(17): 2121-2127 (2010)
45		Liang-Tsung Huang, Lien Fu Lai, M. Michael Gromiha: Human-Readable Rule Generator for Integrating Amino Acid Sequence Information and Stability of Mutant Proteins. IEEE/ACM Trans. Comput. Biology Bioinform. 7(4): 681-687 (2010)
44		Yu-Yen Ou, Shu-An Chen, M. Michael Gromiha: Prediction of membrane spanning segments and topology in beta-barrel membrane proteins at better accuracy. Journal of Computational Chemistry 31(1): 217-223 (2010)
43		Liang-Tsung Huang, Lien Fu Lai, Chao-Chin Wu, M. Michael Gromiha: Development of knowledge-based system for predicting the stability of proteins upon point mutations. Neurocomputing 73(13-15): 2293-2299 (2010)
	2009
42		Liang-Tsung Huang, M. Michael Gromiha: Reliable prediction of protein thermostability change upon double mutation from amino acid sequence. Bioinformatics 25(17): 2181-2187 (2009)
41		M. Michael Gromiha, Yukimitsu Yabuki, M. Xavier Suresh, A. Mary Thangakani, Makiko Suwa, Kazuhiko Fukui: TMFunction: database for functional residues in membrane proteins. Nucleic Acids Research 37(Database-Issue): 201-204 (2009)
	2008
40		M. Michael Gromiha, Shandar Ahmad, Makiko Suwa: Neural network based prediction of protein structure and Function: Comparison with other machine learning methods. IJCNN 2008: 1739-1744
39		Y.-h. Taguchi, M. Michael Gromiha: Gene Ontology term prediction based upon amino acid occurrence. IJCNN 2008: 615-620
38		M. Michael Gromiha, Liang-Tsung Huang, Lien Fu Lai: Sequence Based Prediction of Protein Mutant Stability and Discrimination of Thermophilic Proteins. PRIB 2008: 1-12
37		M. Michael Gromiha, Yukimitsu Yabuki: Functional discrimination of membrane proteins using machine learning techniques. BMC Bioinformatics 9: (2008)
36		Yu-Yen Ou, M. Michael Gromiha, Shu-An Chen, Makiko Suwa: TMBETADISC-RBF: Discrimination of beta-barrel membrane proteins using RBF networks and PSSM profiles. Computational Biology and Chemistry 32(3): 227-231 (2008)
35		Liang-Tsung Huang, M. Michael Gromiha: Analysis and prediction of protein folding rates using quadratic response surface models. Journal of Computational Chemistry 29(10): 1675-1683 (2008)
	2007
34		Y.-h. Taguchi, M. Michael Gromiha: Protein Fold Recognition Based Upon the Amino Acid Occurrence. PRIB 2007: 120-131
33		M. Michael Gromiha: Bioinformatics on beta-Barrel Membrane Proteins: Sequence and Structural Analysis, Discrimination and Prediction. PRIB 2007: 148-157
32		Y.-h. Taguchi, M. Michael Gromiha: Application of amino acid occurrence for discriminating different folding types of globular proteins. BMC Bioinformatics 8: (2007)
31		Manish Kumar, M. Michael Gromiha, Gajendra P. S. Raghava: Identification of DNA-binding proteins using support vector machines and evolutionary profiles. BMC Bioinformatics 8: (2007)
30		Liang-Tsung Huang, M. Michael Gromiha, Shinn-Ying Ho: iPTREE-STAB: interpretable decision tree based method for predicting protein stability changes upon mutations. Bioinformatics 23(10): 1292-1293 (2007)
29		M. Michael Gromiha, Yukimitsu Yabuki, Srinesh Kundu, Sivasundaram Suharnan, Makiko Suwa: TMBETA-GENOME: database for annotated ß-barrel membrane proteins in genomic sequences. Nucleic Acids Research 35(Database-Issue): 314-316 (2007)
	2006
28		Liang-Tsung Huang, M. Michael Gromiha, Shiow-Fen Hwang, Shinn-Ying Ho: Knowledge acquisition and development of accurate rules for predicting protein stability changes. Computational Biology and Chemistry 30(6): 408-415 (2006)
27		M. Michael Gromiha, Samuel Selvaraj, A. Mary Thangakani: A Statistical Method for Predicting Protein Unfolding Rates from Amino Acid Sequence. Journal of Chemical Information and Modeling 46(3): 1503-1508 (2006)
26		M. D. Shaji Kumar, M. Michael Gromiha: PINT: Protein-protein Interactions Thermodynamic Database. Nucleic Acids Research 34(Database-Issue): 195-198 (2006)
25		M. D. Shaji Kumar, K. Abdulla Bava, M. Michael Gromiha, Ponraj Prabakaran, Koji Kitajima, Hatsuho Uedaira, Akinori Sarai: ProTherm and ProNIT: thermodynamic databases for proteins and protein-nucleic acid interactions. Nucleic Acids Research 34(Database-Issue): 204-206 (2006)
24		Vijaya Parthiban, M. Michael Gromiha, Dietmar Schomburg: CUPSAT: prediction of protein stability upon point mutations. Nucleic Acids Research 34(Web-Server-Issue): 239-242 (2006)
23		M. Michael Gromiha, A. Mary Thangakani, Samuel Selvaraj: FOLD-RATE: prediction of protein folding rates from amino acid sequence. Nucleic Acids Research 34(Web-Server-Issue): 70-74 (2006)
	2005
22		Keun-Joon Park, M. Michael Gromiha, Paul Horton, Makiko Suwa: Discrimination of outer membrane proteins using support vector machines. Bioinformatics 21(23): 4223-4229 (2005)
21		M. Michael Gromiha, Makiko Suwa: A simple statistical method for discriminating outer membrane proteins with better accuracy. Bioinformatics 21(7): 961-968 (2005)
20		K. Saraboji, M. Michael Gromiha, Mon Nanjappa Ponnuswamy: Relative importance of secondary structure and solvent accessibility to the stability of protein mutants.: A case study with amino acid properties and energetics on T4 and human lysozymes. Computational Biology and Chemistry 29(1): 25-35 (2005)
19		M. Michael Gromiha, Shandar Ahmad, Makiko Suwa: Application of residue distribution along the sequence for discriminating outer membrane proteins. Computational Biology and Chemistry 29(2): 135-142 (2005)
18		Akinori Sarai, Jorg Siebers, Samuel Selvaraj, M. Michael Gromiha, Hidetoshi Kono: Integration of Bioinformatics and Computational Biology to Understand Protein-dna Recognition Mechanism. J. Bioinformatics and Computational Biology 3(1): 169-183 (2005)
17		M. Michael Gromiha: A Statistical Model for Predicting Protein Folding Rates from Amino Acid Sequence with Structural Class Information. Journal of Chemical Information and Modeling 45(2): 494-501 (2005)
16		M. Michael Gromiha, Shandar Ahmad, Makiko Suwa: TMBETA-NET: discrimination and prediction of membrane spanning ß-strands in outer membrane proteins. Nucleic Acids Research 33(Web-Server-Issue): 164-167 (2005)
15		Csaba Magyar, M. Michael Gromiha, Gerard Pujadas, Gábor E. Tusnády, István Simon: SRide: a server for identifying stabilizing residues in proteins. Nucleic Acids Research 33(Web-Server-Issue): 303-305 (2005)
	2004
14		Akinori Sarai, Samuel Selvaraj, M. Michael Gromiha, Hidetoshi Kono: Structure-Function Relationship in DNA Sequence Recognition by Transcription Factors. APBC 2004: 233-238
13		Shandar Ahmad, M. Michael Gromiha, Hamed Fawareh, Akinori Sarai: ASAView: Database and tool for solvent accessibility representation in proteins. BMC Bioinformatics 5: 51 (2004)
12		Shandar Ahmad, M. Michael Gromiha, Akinori Sarai: Analysis and prediction of DNA-binding proteins and their binding residues based on composition, sequence and structural information. Bioinformatics 20(4): 477-486 (2004)
11		M. Michael Gromiha, Shandar Ahmad, Makiko Suwa: Neural network-based prediction of transmembrane -strand segments in outer membrane proteins. Journal of Computational Chemistry 25(5): 762-767 (2004)
10		K. Abdulla Bava, M. Michael Gromiha, Hatsuho Uedaira, Koji Kitajima, Akinori Sarai: ProTherm, version 4.0: thermodynamic database for proteins and mutants. Nucleic Acids Research 32(Database-Issue): 120-121 (2004)
	2003
9		Shandar Ahmad, M. Michael Gromiha, Akinori Sarai: RVP-net: online prediction of real valued accessible surface area of proteins from single sequences. Bioinformatics 19(14): 1849-1851 (2003)
8		M. Michael Gromiha: Importance of Native-State Topology for Determining the Folding Rate of Two-State Proteins. Journal of Chemical Information and Computer Sciences 43(5): 1481-1485 (2003)
7		Shandar Ahmad, M. Michael Gromiha: Design and training of a neural network for predicting the solvent accessibility of proteins. Journal of Computational Chemistry 24(11): 1313-1320 (2003)
	2002
6		Shandar Ahmad, M. Michael Gromiha: NETASA: neural network based prediction of solvent accessibility. Bioinformatics 18(6): 819-824 (2002)
5		M. Michael Gromiha, Hatsuho Uedaira, Jianghong An, Samuel Selvaraj, Ponraj Prabakaran, Akinori Sarai: ProTherm, Thermodynamic Database for Proteins and Mutants: developments in version 3.0. Nucleic Acids Research 30(1): 301-302 (2002)
	2001
4		Ponraj Prabakaran, Jianghong An, M. Michael Gromiha, Samuel Selvaraj, Hatsuho Uedaira, Hidetoshi Kono, Akinori Sarai: Thermodynamic database for protein-nucleic acid interactions (ProNIT). Bioinformatics 17(11): 1027-1034 (2001)
	2000
3		Kenji Sayano, Hidetoshi Kono, M. Michael Gromiha, Akinori Sarai: Multicanonical Monte Carlo calculation of the free-energy map of the base-amino acid interaction. Journal of Computational Chemistry 21(11): 954-962 (2000)
2		M. Michael Gromiha, Jianghong An, Hidetoshi Kono, Motohisa Oobatake, Hatsuho Uedaira, Ponraj Prabakaran, Akinori Sarai: ProTherm, version 2.0: thermodynamic database for proteins and mutants. Nucleic Acids Research 28(1): 283-285 (2000)
	1999
1		M. Michael Gromiha, Jianghong An, Hidetoshi Kono, Motohisa Oobatake, Hatsuho Uedaira, Akinori Sarai: ProTherm: Thermodynamic Database for Proteins and Mutants. Nucleic Acids Research 27(1): 286-288 (1999)

Coauthor Index

1	Shandar Ahmad	[6] [7] [9] [11] [12] [13] [16] [19] [40]
2	Jianghong An	[1] [2] [4] [5]
3	K. Abdulla Bava	[10] [25]
4	Jagat Singh Chauhan	[52]
5	Shu-An Chen	[36] [44] [47] [50]
6	Hamed Fawareh	[13]
7	Kazuhiko Fukui	[41] [48] [49] [51]
8	Yong Gan	[54]
9	Phalguni Gupta	[54]
10	Shinn-Ying Ho	[28] [30]
11	Paul Horton	[22]
12	De-Shuang Huang (Deshuang Huang)	[54]
13	Liang-Tsung Huang	[28] [30] [35] [38] [42] [43] [45] [46] [53]
14	Shiow-Fen Hwang	[28]
15	B. Jayaram	[48] [49]
16	Koji Kitajima	[10] [25]
17	Hidetoshi Kono	[1] [2] [3] [4] [14] [18]
18	M. D. Shaji Kumar	[25] [26]
19	Manish Kumar	[31]
20	Srinesh Kundu	[29]
21	Lien Fu Lai	[38] [43] [45]
22	Tzong-Yi Lee	[50]
23	Csaba Magyar	[15]
24	Motohisa Oobatake	[1] [2]
25	Yu-Yen Ou	[36] [44] [47] [50]
26	Keun-Joon Park	[22]
27	Vijaya Parthiban	[24]
28	Mon Nanjappa Ponnuswamy	[20]
29	Ponraj Prabakaran	[2] [4] [5] [25]
30	Gerard Pujadas	[15]
31	Gajendra P. S. Raghava (G. P. S. Raghava)	[31] [52]
32	K. Saraboji	[20]
33	Akinori Sarai	[1] [2] [3] [4] [5] [9] [10] [12] [13] [14] [18] [25]
34	N. Saranya	[49]
35	Kenji Sayano	[3]
36	Dietmar Schomburg	[24]
37	Samuel Selvaraj	[4] [5] [14] [18] [23] [27] [48] [49]
38	Jorg Siebers	[18]
39	István Simon	[15]
40	Harinder Singh	[52]
41	R. Sowdhamini	[51]
42	Sivasundaram Suharnan	[29]
43	M. Xavier Suresh	[41]
44	Makiko Suwa	[11] [16] [19] [21] [22] [29] [36] [40] [41]
45	Y.-h. Taguchi	[32] [34] [39]
46	A. Mary Thangakani	[23] [27] [41]
47	Gábor E. Tusnády	[15]
48	Hatsuho Uedaira	[1] [2] [4] [5] [10] [25]
49	Chao-Chin Wu	[43]
50	Yukimitsu Yabuki	[29] [37] [41]

Colors in the list of coauthors

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