 | 2010 |
| 9 |  | Wayne Delport,
Art F. Y. Poon,
Simon D. W. Frost,
Sergei L. Kosakovsky Pond:
Datamonkey 2010: a suite of phylogenetic analysis tools for evolutionary biology.
Bioinformatics 26(19): 2455-2457 (2010) |
| 2009 |
| 8 |  | Sergei L. Kosakovsky Pond,
David Posada,
Eric Stawiski,
Colombe Chappey,
Art F. Y. Poon,
Gareth Hughes,
Esther Fearnhill,
Mike B. Gravenor,
Andrew J. Leigh Brown,
Simon D. W. Frost:
An Evolutionary Model-Based Algorithm for Accurate Phylogenetic Breakpoint Mapping and Subtype Prediction in HIV-1.
PLoS Computational Biology 5(11): (2009) |
| 2008 |
| 7 |  | Art F. Y. Poon,
Fraser I. Lewis,
Simon D. W. Frost,
Sergei L. Kosakovsky Pond:
Spidermonkey: rapid detection of co-evolving sites using Bayesian graphical models.
Bioinformatics 24(17): 1949-1950 (2008) |
| 2007 |
| 6 |  | Art F. Y. Poon,
Fraser I. Lewis,
Sergei L. Kosakovsky Pond,
Simon D. W. Frost:
Evolutionary Interactions between N-Linked Glycosylation Sites in the HIV-1 Envelope.
PLoS Computational Biology 3(1): (2007) |
| 5 |  | Art F. Y. Poon,
Fraser I. Lewis,
Sergei L. Kosakovsky Pond,
Simon D. W. Frost:
An Evolutionary-Network Model Reveals Stratified Interactions in the V3 Loop of the HIV-1 Envelope.
PLoS Computational Biology 3(11): (2007) |
| 2006 |
| 4 |  | Sergei L. Kosakovsky Pond,
David Posada,
Michael B. Gravenor,
Christopher H. Woelk,
Simon D. W. Frost:
GARD: a genetic algorithm for recombination detection.
Bioinformatics 22(24): 3096-3098 (2006) |
| 3 |  | Sergei L. Kosakovsky Pond,
Simon D. W. Frost,
Zehava Grossman,
Michael B. Gravenor,
Douglas D. Richman,
Andrew J. Leigh Brown:
Adaptation to Different Human Populations by HIV-1 Revealed by Codon-Based Analyses.
PLoS Computational Biology 2(6): (2006) |
| 2005 |
| 2 |  | Sergei L. Kosakovsky Pond,
Simon D. W. Frost:
Datamonkey: rapid detection of selective pressure on individual sites of codon alignments.
Bioinformatics 21(10): 2531-2533 (2005) |
| 1 |  | Sergei L. Kosakovsky Pond,
Simon D. W. Frost,
Spencer V. Muse:
HyPhy: hypothesis testing using phylogenies.
Bioinformatics 21(5): 676-679 (2005) |