Alexandre P. Francisco

	2011
9		Ricardo Santos Aires, João A. Carriço, Alexandre P. Francisco, Sara C. Madeira: Baiacu: A Tool for the Visual Analysis of the Saccharomyces Cerevisiae Regulatory Network. PACBB 2011: 49-56
8		Joana P. Gonçalves, Alexandre P. Francisco, Nuno P. Mira, Miguel C. Teixeira, Isabel Sá-Correia, Arlindo L. Oliveira, Sara C. Madeira: TFRank: network-based prioritization of regulatory associations underlying transcriptional responses. Bioinformatics 27(22): 3149-3157 (2011)
7		Dário Abdulrehman, Pedro T. Monteiro, Miguel C. Teixeira, Nuno P. Mira, Artur B. Lourenço, Sandra Costa dos Santos, Tânia Rodrigues Cabrito, Alexandre P. Francisco, Sara C. Madeira, Ricardo Santos Aires, Arlindo L. Oliveira, Isabel Sá-Correia, Ana T. Freitas: YEASTRACT: providing a programmatic access to curated transcriptional regulatory associations in Saccharomyces cerevisiae through a web services interface. Nucleic Acids Research 39(Database-Issue): 136-140 (2011)
	2010
6		João Almeida, João Tiple, Mário Ramirez, José Melo-Cristino, Cátia Vaz, Alexandre P. Francisco, João A. Carriço: An Ontology and a REST API for Sequence Based Microbial Typing Data. JBI 2010: 21-28
5		Alexandre P. Francisco, Ricardo A. Baeza-Yates, Arlindo L. Oliveira: Mining Large Query Induced Graphs towards a Hierarchical Query Folksonomy. SPIRE 2010: 237-242
	2009
4		Alexandre P. Francisco, Miguel Bugalho, Mário Ramirez, João A. Carriço: Global optimal eBURST analysis of multilocus typing data using a graphic matroid approach. BMC Bioinformatics 10: (2009)
	2008
3		Alexandre P. Francisco, Arlindo L. Oliveira, Ana T. Freitas: Identification of Transcription Factor Binding Sites in Promoter Regions by Modularity Analysis of the Motif Co-occurrence Graph. ISBRA 2008: 220-231
2		Alexandre P. Francisco, Ricardo A. Baeza-Yates, Arlindo L. Oliveira: Clique Analysis of Query Log Graphs. SPIRE 2008: 188-199
1		Pedro T. Monteiro, Nuno D. Mendes, Miguel C. Teixeira, Sofia d'Orey, Sandra Tenreiro, Nuno P. Mira, Hélio Pais, Alexandre P. Francisco, Alexandra M. Carvalho, Artur B. Lourenço, Isabel Sá-Correia, Arlindo L. Oliveira, Ana T. Freitas: YEASTRACT-DISCOVERER: new tools to improve the analysis of transcriptional regulatory associations in Saccharomyces cerevisiae. Nucleic Acids Research 36(Database-Issue): 132-136 (2008)

Coauthor Index

1	Dário Abdulrehman	[7]
2	Ricardo Santos Aires	[7] [9]
3	João Almeida	[6]
4	Ricardo A. Baeza-Yates	[2] [5]
5	Miguel Bugalho	[4]
6	Tânia Rodrigues Cabrito	[7]
7	João A. Carriço (João André Carriço)	[4] [6] [9]
8	Alexandra M. Carvalho	[1]
9	Ana T. Freitas	[1] [3] [7]
10	Joana P. Gonçalves	[8]
11	Artur B. Lourenço	[1] [7]
12	Sara C. Madeira (Sara Cordeiro Madeira)	[7] [8] [9]
13	José Melo-Cristino	[6]
14	Nuno D. Mendes	[1]
15	Nuno P. Mira	[1] [7] [8]
16	Pedro T. Monteiro	[1] [7]
17	Arlindo L. Oliveira	[1] [2] [3] [5] [7] [8]
18	Hélio Pais	[1]
19	Mário Ramirez	[4] [6]
20	Isabel Sá-Correia	[1] [7] [8]
21	Sandra Costa dos Santos	[7]
22	Miguel C. Teixeira	[1] [7] [8]
23	Sandra Tenreiro	[1]
24	João Tiple	[6]
25	Cátia Vaz	[6]
26	Sofia d'Orey	[1]

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