Eugénio C. Ferreira

	2011
27		Anália Lourenço, Sónia Carneiro, José P. Pinto, Miguel Rocha, Eugénio C. Ferreira, Isabel Rocha: Interpreting the Regulatory Interplay in E. coli Metabolic Pathways. PACBB 2011: 303-312
26		Sónia Carneiro, Eugénio C. Ferreira, Isabel Rocha: A Systematic Modeling Approach to Elucidate the Triggering of the Stringent Response in Recombinant E. coli Systems. PACBB 2011: 313-320
25		Anália Lourenço, Sónia Carneiro, Miguel Rocha, Eugénio C. Ferreira, Isabel Rocha: Challenges in integrating Escherichia coli molecular biology data. Briefings in Bioinformatics 12(2): 91-103 (2011)
24		Anália Lourenço, Sónia Carneiro, José P. Pinto, Miguel Rocha, Eugénio C. Ferreira, Isabel Rocha: A Study of the Short and Long-term Regulation of E. coli Metabolic Pathways. J. Integrative Bioinformatics 8(3): (2011)
	2010
23		Daniel Machado, Rafael S. Costa, Miguel Rocha, Isabel Rocha, Bruce Tidor, Eugénio C. Ferreira: Model Transformation of Metabolic Networks using a Petri Net Based Framework. ACSD/Petri Nets Workshops 2010: 103-117
22		Sónia Carneiro, Silas Granato Villas-Bôas, Isabel Rocha, Eugénio C. Ferreira: Applying a Metabolic Footprinting Approach to Characterize the Impact of the Recombinant Protein Production in Escherichia coli. IWPACBB 2010: 193-200
21		Rafael S. Costa, Daniel Machado, Isabel Rocha, Eugénio C. Ferreira: Hybrid dynamic modeling of Escherichia coli central metabolic network combining Michaelis-Menten and approximate kinetic equations. Biosystems 100(2): 150-157 (2010)
20		Anália Lourenço, Rafael Carreira, Daniel Glez-Peña, José Ramon Méndez, Sónia Carneiro, Luis Mateus Rocha, Fernando Díaz, Eugénio C. Ferreira, Isabel Rocha, Florentino Fdez-Riverola, Miguel Rocha: BioDR: Semantic indexing networks for biomedical document retrieval. Expert Syst. Appl. 37(4): 3444-3453 (2010)
	2009
19		Pedro Evangelista, Isabel Rocha, Eugénio C. Ferreira, Miguel Rocha: Evolutionary Approaches for Strain Optimization Using Dynamic Models under a Metabolic Engineering Perspective. EvoBIO 2009: 140-151
18		Daniel Machado, Rafael S. Costa, Miguel Rocha, Isabel Rocha, Bruce Tidor, Eugénio C. Ferreira: A Critical Review on Modelling Formalisms and Simulation Tools in Computational Biosystems. IWANN (2) 2009: 1063-1070
17		Pedro Evangelista, Isabel Rocha, Eugénio C. Ferreira, Miguel Rocha: A Software Tool for the Simulation and Optimization of Dynamic Metabolic Models. IWANN (2) 2009: 1071-1078
16		Rafael S. Costa, Daniel Machado, Isabel Rocha, Eugénio C. Ferreira: Large Scale Dynamic Model Reconstruction for the Central Carbon Metabolism of Escherichia coli . IWANN (2) 2009: 1079-1083
15		Anália Lourenço, Sónia Carneiro, Eugénio C. Ferreira, Rafael Carreira, Luis Mateus Rocha, Daniel Glez-Peña, José Ramon Méndez, Florentino Fdez-Riverola, Fernando Díaz, Isabel Rocha, Miguel Rocha: Biomedical Text Mining Applied to Document Retrieval and Semantic Indexing. IWANN (2) 2009: 954-963
14		Anália Lourenço, Rafael Carreira, Sónia Carneiro, Paulo Maia, Daniel Glez-Peña, Florentino Fdez-Riverola, Eugénio C. Ferreira, Isabel Rocha, Miguel Rocha: @Note: A workbench for Biomedical Text Mining. Journal of Biomedical Informatics 42(4): 710-720 (2009)
	2008
13		Anália Lourenço, Rafael Carreira, Sónia Carneiro, Paulo Maia, Daniel Glez-Peña, Florentino Fdez-Riverola, Eugénio C. Ferreira, Isabel Rocha, Miguel Rocha: A framework for the development of Biomedical Text Mining software tools. BIBE 2008: 1-6
12		Rui Mendes, Anália Lourenço, Sónia Carneiro, Miguel Rocha, Isabel Rocha, Eugénio C. Ferreira: A framework for the integrated analysis of metabolic and regulatory networks. BIBE 2008: 1-6
11		Paulo Maia, Isabel Rocha, Eugénio C. Ferreira, Miguel Rocha: Evaluating evolutionary multiobjective algorithms for the in silico optimization of mutant strains. BIBE 2008: 1-6
10		José P. Pinto, Oscar Días, Anália Lourenço, Sónia Carneiro, Eugénio C. Ferreira, Isabel Rocha, Miguel Rocha: Data Integration Issues in the Reconstruction of the Genome-Scale Metabolic Model of Zymomonas Mobillis. IWPACBB 2008: 92-101
9		Miguel Rocha, Paulo Maia, Rui Mendes, José P. Pinto, Eugénio C. Ferreira, Jens Nielsen, Kiran Raosaheb Patil, Isabel Rocha: Natural computation meta-heuristics for the in silico optimization of microbial strains. BMC Bioinformatics 9: (2008)
	2007
8		Miguel Rocha, José P. Pinto, Isabel Rocha, Eugénio C. Ferreira: Optimization of Bacterial Strains with Variable-Sized Evolutionary Algorithms. CIBCB 2007: 331-337
7		Miguel Rocha, Rui Mendes, Paulo Maia, José P. Pinto, Isabel Rocha, Eugénio C. Ferreira: Evaluating Simulated Annealing Algorithms in the Optimization of Bacterial Strains. EPIA Workshops 2007: 473-484
6		Miguel Rocha, José P. Pinto, Isabel Rocha, Eugénio C. Ferreira: Evaluating Evolutionary Algorithms and Differential Evolution for the Online Optimization of Fermentation Processes. EvoBIO 2007: 236-246
5		Enrique Herrera, Bernardino Castillo, Jesús Ramírez, Eugénio C. Ferreira: Exact Fuzzy Observer for a Baker's Yeast Fed-Batch Fermentation Process. FUZZ-IEEE 2007: 1-6
4		Enrique Herrera, Bernardino Castillo, Jesús Ramírez, Eugénio C. Ferreira: Takagi-sugeno multiple-model controller for a continuous baking yeast fermentation process. ICINCO-ICSO 2007: 436-439
	2005
3		Miguel Rocha, Isabel Rocha, Eugénio C. Ferreira: A new representation in evolutionary algorithms for the optimization of bioprocesses. Congress on Evolutionary Computation 2005: 484-490
2		Isabel A. Espírito-Santo, Edite M. G. P. Fernandes, M. Madalena Araújo, Eugénio C. Ferreira: NEOS Server Usage in Wastewater Treatment Cost Minimization. ICCSA (4) 2005: 632-641
	2004
1		Miguel Rocha, José Neves, Isabel Rocha, Eugénio C. Ferreira: Evolutionary Algorithms for Optimal Control in Fed-Batch Fermentation Processes. EvoWorkshops 2004: 84-93

Coauthor Index

1	M. Madalena Araújo	[2]
2	Sónia Carneiro	[10] [12] [13] [14] [15] [20] [22] [24] [25] [26] [27]
3	Rafael Carreira	[13] [14] [15] [20]
4	Bernardino Castillo	[4] [5]
5	Rafael S. Costa	[16] [18] [21] [23]
6	Oscar Días	[10]
7	Fernando Díaz (Fernando Díaz Gómez)	[15] [20]
8	Isabel A. Espírito-Santo	[2]
9	Pedro Evangelista	[17] [19]
10	Edite M. G. P. Fernandes	[2]
11	Daniel Glez-Peña	[13] [14] [15] [20]
12	Enrique Herrera	[4] [5]
13	Anália Lourenço	[10] [12] [13] [14] [15] [20] [24] [25] [27]
14	Daniel Machado	[16] [18] [21] [23]
15	Paulo Maia	[7] [9] [11] [13] [14]
16	Rui Mendes	[7] [9] [12]
17	José Ramon Méndez (José Ramón Méndez Reboredo)	[15] [20]
18	José Neves	[1]
19	Jens Nielsen	[9]
20	Kiran Raosaheb Patil	[9]
21	José P. Pinto (José Pedro Pinto)	[6] [7] [8] [9] [10] [24] [27]
22	Jesús Ramírez	[4] [5]
23	Florentino Fernández Riverola (Florentino Fdez-Riverola)	[13] [14] [15] [20]
24	Isabel Rocha	[1] [3] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27]
25	Luis Mateus Rocha	[15] [20]
26	Miguel Rocha (Miguel P. Rocha, Miguel Francisco de Almeida Pereira da Rocha)	[1] [3] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [17] [18] [19] [20] [23] [24] [25] [27]
27	Bruce Tidor	[18] [23]
28	Silas Granato Villas-Bôas	[22]

Colors in the list of coauthors

Last update Tue May 29 20:41:18 2012 CET by the DBLP Team — Data released under the ODC-BY 1.0 license — See also our legal information page