 | 2012 |
| 6 |  | Anna A. Nilulova,
Alexander V. Favorov,
Vsevolod Makeev,
Andrey A. Mironov:
A Generalized Hidden Markov Model for Prediction of Cis-regulatory Modules in Eukaryote Genomes and Description of Their Internal Structure.
BIOINFORMATICS 2012: 34-41 |
| 2010 |
| 5 |  | Ivan V. Kulakovskiy,
Valentina Boeva,
Alexander V. Favorov,
Vsevolod Makeev:
Deep and wide digging for binding motifs in ChIP-Seq data.
Bioinformatics 26(20): 2622-2623 (2010) |
| 4 |  | Elana J. Fertig,
Jie Ding,
Alexander V. Favorov,
Giovanni Parmigiani,
Michael F. Ochs:
CoGAPS: an R/C++ package to identify patterns and biological process activity in transcriptomic data.
Bioinformatics 26(21): 2792-2793 (2010) |
| 2009 |
| 3 |  | Ivan V. Kulakovskiy,
Alexander V. Favorov,
Vsevolod Makeev:
Motif discovery and motif finding from genome-mapped DNase footprint data.
Bioinformatics 25(18): 2318-2325 (2009) |
| 2006 |
| 2 |  | Ludmila V. Danilova,
Dmitri D. Pervouchine,
Alexander V. Favorov,
Andrey A. Mironov:
Rnakinetics: a Web Server that Models Secondary Structure Kinetics of an Elongating RNA.
J. Bioinformatics and Computational Biology 4(2): 589-596 (2006) |
| 2005 |
| 1 |  | Alexander V. Favorov,
Mikhail S. Gelfand,
Anna V. Gerasimova,
Dmitry A. Ravcheev,
Andrey A. Mironov,
Vsevolod Makeev:
A Gibbs sampler for identification of symmetrically structured, spaced DNA motifs with improved estimation of the signal length.
Bioinformatics 21(10): 2240-2245 (2005) |