 | 2011 |
| 20 |  | Nanjiang Shu,
Arne Elofsson:
KalignP: Improved multiple sequence alignments using position specific gap penalties in Kalign2.
Bioinformatics 27(12): 1702-1703 (2011) |
| 19 |  | Per Larsson,
Marcin J. Skwark,
Björn Wallner,
Arne Elofsson:
Improved predictions by Pcons.net using multiple templates.
Bioinformatics 27(3): 426-427 (2011) |
| 18 |  | Aron Hennerdal,
Arne Elofsson:
Rapid membrane protein topology prediction.
Bioinformatics 27(9): 1322-1323 (2011) |
| 2010 |
| 17 |  | Kristoffer Illergard,
Simone Callegari,
Arne Elofsson:
MPRAP: An accessibility predictor for alpha-helical transmembrane proteins that performs well inside and outside the membrane.
BMC Bioinformatics 11: 333 (2010) |
| 2009 |
| 16 |  | Andreas Bernsel,
Håkan Viklund,
Aron Hennerdal,
Arne Elofsson:
TOPCONS: consensus prediction of membrane protein topology.
Nucleic Acids Research 37(Web-Server-Issue): 465-468 (2009) |
| 2008 |
| 15 |  | Håkan Viklund,
Arne Elofsson:
OCTOPUS: improving topology prediction by two-track ANN-based preference scores and an extended topological grammar.
Bioinformatics 24(15): 1662-1668 (2008) |
| 14 |  | Håkan Viklund,
Andreas Bernsel,
Marcin J. Skwark,
Arne Elofsson:
SPOCTOPUS: a combined predictor of signal peptides and membrane protein topology.
Bioinformatics 24(24): 2928-2929 (2008) |
| 2007 |
| 13 |  | Björn Wallner,
Per Larsson,
Arne Elofsson:
Pcons.net: protein structure prediction meta server.
Nucleic Acids Research 35(Web-Server-Issue): 369-374 (2007) |
| 2006 |
| 12 |  | Erik Granseth,
Håkan Viklund,
Arne Elofsson:
ZPRED: Predicting the distance to the membrane center for residues in alpha-helical membrane proteins.
ISMB (Supplement of Bioinformatics) 2006: 191-196 |
| 11 |  | Tomas Ohlson,
Varun Aggarwal,
Arne Elofsson,
Robert M. MacCallum:
Improved alignment quality by combining evolutionary information, predicted secondary structure and self-organizing maps.
BMC Bioinformatics 7: 357 (2006) |
| 10 |  | Mauro Amico,
Michele Finelli,
Ivan Rossi,
Andrea Zauli,
Arne Elofsson,
Håkan Viklund,
Gunnar von Heijne,
David Jones,
Anders Krogh,
Piero Fariselli,
Pier Luigi Martelli,
Rita Casadio:
PONGO: a web server for multiple predictions of all-alpha transmembrane proteins.
Nucleic Acids Research 34(Web-Server-Issue): 169-172 (2006) |
| 2005 |
| 9 |  | Tomas Ohlson,
Arne Elofsson:
ProfNet, a method to derive profile-profile alignment scoring functions that improves the alignments of distantly related proteins.
BMC Bioinformatics 6: 253 (2005) |
| 8 |  | Björn Wallner,
Arne Elofsson:
Pcons5: combining consensus, structural evaluation and fold recognition scores.
Bioinformatics 21(23): 4248-4254 (2005) |
| 2003 |
| 7 |  | Krzysztof Ginalski,
Arne Elofsson,
Daniel Fischer,
Leszek Rychlewski:
3D-Jury: A Simple Approach to Improve Protein Structure Predictions.
Bioinformatics 19(8): 1015-1018 (2003) |
| 2002 |
| 6 |  | Pierre Dönnes,
Arne Elofsson:
Prediction of MHC class I binding peptides, using SVMHC.
BMC Bioinformatics 3: 25 (2002) |
| 2001 |
| 5 |  | Olivia Eriksson,
Yishao Zhou,
Arne Elofsson:
Side Chain-Positioning as an Integer Programming Problem.
WABI 2001: 128-141 |
| 4 |  | Susana Cristobal,
Adam Zemla,
Daniel Fischer,
Leszek Rychlewski,
Arne Elofsson:
A study of quality measures for protein threading models.
BMC Bioinformatics 2: 5 (2001) |
| 3 |  | Janusz M. Bujnicki,
Arne Elofsson,
Daniel Fischer,
Leszek Rychlewski:
Structure prediction meta server.
Bioinformatics 17(8): 750-751 (2001) |
| 2000 |
| 2 |  | Naomi Siew,
Arne Elofsson,
Leszek Rychlewski,
Daniel Fischer:
MaxSub: an automated measure for the assessment of protein structure prediction quality.
Bioinformatics 16(9): 776-785 (2000) |
| 1999 |
| 1 |  | Arne Elofsson,
Erik L. L. Sonnhammer:
A comparison of sequence and structure protein domain families as a basis for structural genomics.
Bioinformatics 15(6): 480-500 (1999) |