 | 2012 |
| 14 |  | Farhad Hormozdiari,
Faraz Hach,
Süleyman Cenk Sahinalp,
Evan E. Eichler,
Can Alkan:
Sensitive and fast mapping of di-base encoded reads.
Bioinformatics 28(1): 150 (2012) |
| 2011 |
| 13 |  | Fereydoun Hormozdiari,
Iman Hajirasouliha,
Andrew McPherson,
Evan E. Eichler,
Süleyman Cenk Sahinalp:
Simultaneous Structural Variation Discovery in Multiple Paired-End Sequenced Genomes.
RECOMB 2011: 104-105 |
| 12 |  | Farhad Hormozdiari,
Faraz Hach,
Süleyman Cenk Sahinalp,
Evan E. Eichler,
Can Alkan:
Sensitive and fast mapping of di-base encoded reads.
Bioinformatics 27(14): 1915-1921 (2011) |
| 2010 |
| 11 |  | Can Alkan,
Michael Brudno,
Evan E. Eichler,
Maricel G. Kann,
Süleyman Cenk Sahinalp:
Session Introduction.
Pacific Symposium on Biocomputing 2010: 302-304 |
| 10 |  | Troy Zerr,
Gregory M. Cooper,
Evan E. Eichler,
Deborah Nickerson:
Targeted interrogation of copy number variation using SCIMMkit.
Bioinformatics 26(1): 120-122 (2010) |
| 9 |  | Iman Hajirasouliha,
Fereydoun Hormozdiari,
Can Alkan,
Jeffrey M. Kidd,
Inanç Birol,
Evan E. Eichler,
Süleyman Cenk Sahinalp:
Detection and characterization of novel sequence insertions using paired-end next-generation sequencing.
Bioinformatics 26(10): 1277-1283 (2010) |
| 8 |  | Fereydoun Hormozdiari,
Iman Hajirasouliha,
Phuong Dao,
Faraz Hach,
Deniz Yörükoglu,
Can Alkan,
Evan E. Eichler,
Süleyman Cenk Sahinalp:
Next-generation VariationHunter: combinatorial algorithms for transposon insertion discovery.
Bioinformatics [ISMB] 26(12): 350-357 (2010) |
| 2009 |
| 7 |  | Fereydoun Hormozdiari,
Can Alkan,
Evan E. Eichler,
Süleyman Cenk Sahinalp:
Combinatorial Algorithms for Structural Variation Detection in High Throughput Sequenced Genomes.
RECOMB 2009: 218-219 |
| 2007 |
| 6 |  | Can Alkan,
Mario Ventura,
Nicoletta Archidiacono,
Mariano Rocchi,
Süleyman Cenk Sahinalp,
Evan E. Eichler:
Organization and Evolution of Primate Centromeric DNA from Whole-Genome Shotgun Sequence Data.
PLoS Computational Biology 3(9): (2007) |
| 2005 |
| 5 |  | Can Alkan,
Eray Tüzün,
Jerome Buard,
Franck Lethiec,
Evan E. Eichler,
Jeffrey A. Bailey,
Süleyman Cenk Sahinalp:
Manipulating multiple sequence alignments via MaM and WebMaM.
Nucleic Acids Research 33(Web-Server-Issue): 295-298 (2005) |
| 2004 |
| 4 |  | Süleyman Cenk Sahinalp,
Evan E. Eichler,
Paul W. Goldberg,
Petra Berenbrink,
Tom Friedetzky,
Funda Ergün:
Identifying Uniformly Mutated Segments within Repeats.
J. Bioinformatics and Computational Biology 2(4): 657-668 (2004) |
| 3 |  | Can Alkan,
Evan E. Eichler,
Jeffrey A. Bailey,
Süleyman Cenk Sahinalp,
Eray Tüzün:
The Role of Unequal Crossover in Alpha-Satellite DNA Evolution: A Computational Analysis.
Journal of Computational Biology 11(5): 933-944 (2004) |
| 2002 |
| 2 |  | Süleyman Cenk Sahinalp,
Evan E. Eichler,
Paul W. Goldberg,
Petra Berenbrink,
Tom Friedetzky,
Funda Ergün:
Statistical Identification of Uniformly Mutated Segments within Repeats.
CPM 2002: 249-261 |
| 1 |  | Evan E. Eichler:
Recent duplication, evolution and assembly of the human genome.
RECOMB 2002: 155-155 |