 | 2012 |
| 19 |  | Emily Rose Holzinger,
Scott M. Dudek,
Alex T. Frase,
Brooke L. Fridley,
Prabhakar Chalise,
Marylyn D. Ritchie:
Comparison of Methods for Meta-dimensional Data Analysis Using in Silico and Biological Data Sets.
EvoBIO 2012: 134-143 |
| 2011 |
| 18 |  | Emily Rose Holzinger,
Scott M. Dudek,
Eric Torstenson,
Marylyn D. Ritchie:
ATHENA Optimization: The Effect of Initial Parameter Settings across Different Genetic Models.
EvoBio 2011: 48-58 |
| 17 |  | Sarah A. Pendergrass,
Scott M. Dudek,
Dan M. Roden,
Dana C. Crawford,
Marylyn D. Ritchie:
Visual Integration of Results from a Large Dna Biobank (Biovu) Using Synthesis-View.
Pacific Symposium on Biocomputing 2011: 265-275 |
| 2010 |
| 16 |  | Stephen D. Turner,
Scott M. Dudek,
Marylyn D. Ritchie:
Grammatical Evolution of Neural Networks for Discovering Epistasis among Quantitative Trait Loci.
EvoBIO 2010: 86-97 |
| 15 |  | Emily Rose Holzinger,
Carrie C. Buchanan,
Scott M. Dudek,
Eric Torstenson,
Stephen D. Turner,
Marylyn D. Ritchie:
Initialization parameter sweep in ATHENA: optimizing neural networks for detecting gene-gene interactions in the presence of small main effects.
GECCO 2010: 203-210 |
| 14 |  | Stephen D. Turner,
Scott M. Dudek,
Marylyn D. Ritchie:
Incorporating Domain Knowledge into Evolutionary Computing for Discovering Gene-Gene Interaction.
PPSN (1) 2010: 394-403 |
| 13 |  | Benjamin J. Grady,
Eric Torstenson,
Scott M. Dudek,
Justin Giles,
David Sexton,
Marylyn D. Ritchie:
Finding Unique Filter Sets in PLATO: A Precursor to Efficient Interaction Analysis in GWAS Data.
Pacific Symposium on Biocomputing 2010: 315-326 |
| 12 |  | William S. Bush,
Scott M. Dudek,
Marylyn D. Ritchie:
Visualizing SNP statistics in the context of linkage disequilibrium using LD-Plus.
Bioinformatics 26(4): 578-579 (2010) |
| 2009 |
| 11 |  | William S. Bush,
Scott M. Dudek,
Marylyn D. Ritchie:
Biofilter: A Knowledge-Integration System for the Multi-Locus Analysis of Genome-Wide Association Studies.
Pacific Symposium on Biocomputing 2009: 368-379 |
| 2008 |
| 10 |  | Todd L. Edwards,
William S. Bush,
Stephen D. Turner,
Scott M. Dudek,
Eric Torstenson,
Mike Schmidt,
Eden Martin,
Marylyn D. Ritchie:
Generating Linkage Disequilibrium Patterns in Data Simulations Using genomeSIMLA.
EvoBIO 2008: 24-35 |
| 9 |  | Nicholas E. Hardison,
Theresa J. Fanelli,
Scott M. Dudek,
David M. Reif,
Marylyn D. Ritchie,
Alison A. Motsinger-Reif:
A balanced accuracy fitness function leads to robust analysis using grammatical evolution neural networks in the case of class imbalance.
GECCO 2008: 353-354 |
| 8 |  | William S. Bush,
Todd L. Edwards,
Scott M. Dudek,
Brett A. McKinney,
Marylyn D. Ritchie:
Alternative contingency table measures improve the power and detection of multifactor dimensionality reduction.
BMC Bioinformatics 9: (2008) |
| 2006 |
| 7 |  | Alison A. Motsinger,
David M. Reif,
Scott M. Dudek,
Marylyn D. Ritchie:
Understanding the Evolutionary Process of Grammatical Evolution Neural Networks for Feature Selection in Genetic Epidemiology.
CIBCB 2006: 1-8 |
| 6 |  | Alison A. Motsinger,
Scott M. Dudek,
Lance W. Hahn,
Marylyn D. Ritchie:
Comparison of Neural Network Optimization Approaches for Studies of Human Genetics.
EvoWorkshops 2006: 103-114 |
| 5 |  | Alison A. Motsinger,
Lance W. Hahn,
Scott M. Dudek,
Kelli K. Ryckman,
Marylyn D. Ritchie:
Alternative cross-over strategies and selection techniques for grammatical evolution optimized neural networks.
GECCO 2006: 947-948 |
| 4 |  | Scott M. Dudek,
Alison A. Motsinger,
Digna R. Velez,
Scott M. Williams,
Marylyn D. Ritchie:
Data Simulation Software for Whole-Genome Association and Other Studies in Human Genetics.
Pacific Symposium on Biocomputing 2006: 499-510 |
| 3 |  | William S. Bush,
Scott M. Dudek,
Marylyn D. Ritchie:
Parallel multifactor dimensionality reduction: a tool for the large-scale analysis of gene-gene interactions.
Bioinformatics 22(17): 2173-2174 (2006) |
| 2005 |
| 2 |  | William S. Bush,
Alison A. Motsinger,
Scott M. Dudek,
Marylyn D. Ritchie:
Can Neural Network Constraints in GP Provide Power to Detect Genes Associated with Human Disease?.
EvoWorkshops 2005: 44-53 |
| 1 |  | David M. Reif,
Scott M. Dudek,
Christian M. Shaffer,
Janey Wang,
Jason H. Moore:
Exploratory Visual Analysis of Pharmacogenomic Results.
Pacific Symposium on Biocomputing 2005 |