K. Bretonnel Cohen

	2011
36		K. Bretonnel Cohen, Lawrence Hunter, Martha Palmer: A scaleable automated quality assurance technique for semantic representations and proposition banks. Linguistic Annotation Workshop 2011: 82-91
35		K. Bretonnel Cohen, Karin Verspoor, Helen L. Johnson, Christophe Roeder, Philip V. Ogren, William A. Baumgartner Jr., Elizabeth K. White, Hannah J. Tipney, Lawrence Hunter: High-Precision Biological Event Extraction: Effects of System and of Data. Computational Intelligence 27(4): 681-701 (2011)
34		Karën Fort, Gilles Adda, K. Bretonnel Cohen: Amazon Mechanical Turk: Gold Mine or Coal Mine? Computational Linguistics 37(2): 413-420 (2011)
33		Yoshinobu Kano, Makoto Miwa, K. Bretonnel Cohen, Lawrence Hunter, Sophia Ananiadou, Jun-ichi Tsujii: U-Compare: A modular NLP workflow construction and evaluation system. IBM Journal of Research and Development 55(3): 11 (2011)
	2010
32		Carsten Görg, Hannah J. Tipney, Karin Verspoor, William A. Baumgartner Jr., K. Bretonnel Cohen, John T. Stasko, Lawrence Hunter: Visualization and Language Processing for Supporting Analysis across the Biomedical Literature. KES (4) 2010: 420-429
31		K. Bretonnel Cohen, Christophe Roeder, William A. Baumgartner Jr., Lawrence Hunter, Karin Verspoor: Test Suite Design for Biomedical Ontology Concept Recognition Systems. LREC 2010
30		K. Bretonnel Cohen, Helen L. Johnson, Karin Verspoor, Christophe Roeder, Lawrence Hunter: The structural and content aspects of abstracts versus bodies of full text journal articles are different. BMC Bioinformatics 11: 492 (2010)
29		Karin Verspoor, Christophe Roeder, Helen L. Johnson, K. Bretonnel Cohen, William A. Baumgartner Jr., Lawrence Hunter: Exploring Species-Based Strategies for Gene Normalization. IEEE/ACM Trans. Comput. Biology Bioinform. 7(3): 462-471 (2010)
	2009
28		Thomas C. Wiegers, Allan Peter Davis, K. Bretonnel Cohen, Lynette Hirschman, Carolyn J. Mattingly: Text mining and manual curation of chemical-gene-disease networks for the Comparative Toxicogenomics Database (CTD). BMC Bioinformatics 10: 326 (2009)
27		Karin Verspoor, K. Bretonnel Cohen, Lawrence Hunter: The textual characteristics of traditional and Open Access scientific journals are similar. BMC Bioinformatics 10: (2009)
26		Karin Verspoor, Daniel Dvorkin, K. Bretonnel Cohen, Lawrence Hunter: Ontology quality assurance through analysis of term transformations. Bioinformatics 25(12): (2009)
25		Yoshinobu Kano, William A. Baumgartner Jr., Luke McCrohon, Sophia Ananiadou, K. Bretonnel Cohen, Lawrence Hunter, Jun-ichi Tsujii: U-Compare: share and compare text mining tools with UIMA. Bioinformatics 25(15): 1997-1998 (2009)
24		Wendy Webber Chapman, K. Bretonnel Cohen: Current issues in biomedical text mining and natural language processing. Journal of Biomedical Informatics 42(5): 757-759 (2009)
	2008
23		Zhang-Zhi Hu, K. Bretonnel Cohen, Lynette Hirschman, Alfonso Valencia, Hongfang Liu, Michelle G. Giglio, Cathy H. Wu: iProLINK: A Framework for Linking Text Mining with Ontology and Systems Biology. BIBM 2008: 467-472
22		K. Bretonnel Cohen, Hong Yu, Philip E. Bourne, Lynette Hirschman: Session Introduction. Pacific Symposium on Biocomputing 2008: 551-555
21		J. Gregory Caporaso, Nita Deshpande, J. Lynn Fink, Philip E. Bourne, K. Bretonnel Cohen, Lawrence Hunter: Intrinsic Evaluation of Text Mining Tools May Not Predict Performance on Realistic Tasks. Pacific Symposium on Biocomputing 2008: 640-651
20		Lawrence Hunter, Zhiyong Lu, James Firby, William A. Baumgartner Jr., Helen L. Johnson, Philip V. Ogren, K. Bretonnel Cohen: OpenDMAP: An open source, ontology-driven concept analysis engine, with applications to capturing knowledge regarding protein transport, protein interactions and cell-type-specific gene expression. BMC Bioinformatics 9: (2008)
19		Dina Demner-Fushman, Sophia Ananiadou, K. Bretonnel Cohen, John Pestian, Jun-ichi Tsujii, Bonnie L. Webber: Themes in biomedical natural language processing: BioNLP08. BMC Bioinformatics 9(S-11): (2008)
18		K. Bretonnel Cohen, Lawrence Hunter: Getting Started in Text Mining. PLoS Computational Biology 4(1): (2008)
	2007
17		K. Bretonnel Cohen: BioNLP. HLT-NAACL (Tutorial Abstracts) 2007: 1-2
16		William A. Baumgartner Jr., K. Bretonnel Cohen, Lynne M. Fox, George Acquaah-Mensah, Lawrence Hunter: Manual curation is not sufficient for annotation of genomic databases. ISMB/ECCB (Supplement of Bioinformatics) 2007: 41-48
15		Pierre Zweigenbaum, Dina Demner-Fushman, Hong Yu, K. Bretonnel Cohen: Session Introduction. Pacific Symposium on Biocomputing 2007: 205-208
14		Helen L. Johnson, K. Bretonnel Cohen, Lawrence Hunter: A Fault Model for Ontology Mapping, Alignment, and Linking Systems. Pacific Symposium on Biocomputing 2007: 233-268
13		Zhiyong Lu, K. Bretonnel Cohen, Lawrence Hunter: Generif Quality Assurance as Summary Revision. Pacific Symposium on Biocomputing 2007: 269-280
12		J. Gregory Caporaso, William A. Baumgartner Jr., David A. Randolph, K. Bretonnel Cohen, Lawrence Hunter: MutationFinder: a high-performance system for extracting point mutation mentions from text. Bioinformatics 23(14): 1862-1865 (2007)
11		J. Gregory Caporaso, William A. Baumgartner Jr., David A. Randolph, K. Bretonnel Cohen, Lawrence Hunter: Rapid Pattern Development for Concept Recognition Systems: Application to Point mutations. J. Bioinformatics and Computational Biology 5(6): 1233-1259 (2007)
	2006
10		K. Bretonnel Cohen, Olivier Bodenreider, Lynette Hirschman: Session Introduction. Pacific Symposium on Biocomputing 2006: 1-3
9		Helen L. Johnson, K. Bretonnel Cohen, William A. Baumgartner Jr., Zhiyong Lu, Michael Bada, Todd Kester, Hyunmin Kim, Lawrence Hunter: Evaluation of Lexical Methods for Detecting Relationships Between Concepts from Multiple Ontologies. Pacific Symposium on Biocomputing 2006: 28-39
8		Zhiyong Lu, K. Bretonnel Cohen, Lawrence Hunter: Finding GeneRIFs via Gene Ontology Annotations. Pacific Symposium on Biocomputing 2006: 52-63
7		J. Gregory Caporaso, William A. Baumgartner Jr., Hyunmin Kim, Zhiyong Lu, Helen L. Johnson, Olga Medvedeva, Anna Lindemann, Lynne M. Fox, Elizabeth K. White, K. Bretonnel Cohen, Lawrence Hunter: Concept Recognition, Information Retrieval, and Machine Learning in Genomics Question-Answering. TREC 2006
6		K. Bretonnel Cohen, Lawrence Hunter: A critical review of PASBio's argument structures for biomedical verbs. BMC Bioinformatics 7(S-3): (2006)
	2005
5		Philip V. Ogren, K. Bretonnel Cohen, Lawrence Hunter: Implications of Compositionality in the Gene Ontology for Its Curation and Usage . Pacific Symposium on Biocomputing 2005
4		J. Gregory Caporaso, William A. Baumgartner Jr., K. Bretonnel Cohen, Helen L. Johnson, Jesse Paquette, Lawrence Hunter: Concept Recognition and the TREC Genomics Tasks. TREC 2005
3		Shuhei Kinoshita, K. Bretonnel Cohen, Philip V. Ogren, Lawrence Hunter: BioCreAtIvE Task1A: entity identification with a stochastic tagger. BMC Bioinformatics 6(S-1): (2005)
	2004
2		Philip V. Ogren, K. Bretonnel Cohen, George Acquaah-Mensah, Jens Eberlein, Lawrence Hunter: The Compositional Structure of Gene Ontology Terms. Pacific Symposium on Biocomputing 2004: 214-225
	2002
1		K. Bretonnel Cohen, Andrew Dolbey, George Acquaah-Mensah, Lawrence Hunter: Contrast and variability in gene names. ACL Workshop on Natural Language Processing in the Biomedical Domain 2002: 14-20

Coauthor Index

1	George Acquaah-Mensah	[1] [2] [16]
2	Gilles Adda	[34]
3	Sophia Ananiadou	[19] [25] [33]
4	Michael Bada	[9]
5	William A. Baumgartner Jr.	[4] [7] [9] [11] [12] [16] [20] [25] [29] [31] [32] [35]
6	Olivier Bodenreider	[10]
7	Philip E. Bourne	[21] [22]
8	J. Gregory Caporaso	[4] [7] [11] [12] [21]
9	Wendy Webber Chapman	[24]
10	Allan Peter Davis	[28]
11	Dina Demner-Fushman	[15] [19]
12	Nita Deshpande	[21]
13	Andrew Dolbey	[1]
14	Daniel Dvorkin	[26]
15	Jens Eberlein	[2]
16	J. Lynn Fink	[21]
17	James Firby	[20]
18	Karën Fort	[34]
19	Lynne M. Fox	[7] [16]
20	Michelle G. Giglio	[23]
21	Carsten Görg	[32]
22	Lynette Hirschman	[10] [22] [23] [28]
23	Zhang-Zhi Hu	[23]
24	Lawrence Hunter	[1] [2] [3] [4] [5] [6] [7] [8] [9] [11] [12] [13] [14] [16] [18] [20] [21] [25] [26] [27] [29] [30] [31] [32] [33] [35] [36]
25	Helen L. Johnson	[4] [7] [9] [14] [20] [29] [30] [35]
26	Yoshinobu Kano	[25] [33]
27	Todd Kester	[9]
28	Hyunmin Kim	[7] [9]
29	Shuhei Kinoshita	[3]
30	Anna Lindemann	[7]
31	Hongfang Liu	[23]
32	Zhiyong Lu	[7] [8] [9] [13] [20]
33	Carolyn J. Mattingly	[28]
34	Luke McCrohon	[25]
35	Olga Medvedeva	[7]
36	Makoto Miwa	[33]
37	Philip V. Ogren	[2] [3] [5] [20] [35]
38	Martha Palmer (Martha Stone Palmer)	[36]
39	Jesse Paquette	[4]
40	John Pestian	[19]
41	David A. Randolph	[11] [12]
42	Christophe Roeder	[29] [30] [31] [35]
43	John T. Stasko	[32]
44	Hannah J. Tipney	[32] [35]
45	Jun-ichi Tsujii	[19] [25] [33]
46	Alfonso Valencia	[23]
47	Karin Verspoor	[26] [27] [29] [30] [31] [32] [35]
48	Bonnie L. Webber	[19]
49	Elizabeth K. White	[7] [35]
50	Thomas C. Wiegers	[28]
51	Cathy H. Wu	[23]
52	Hong Yu	[15] [22]
53	Pierre Zweigenbaum	[15]

Last update Tue May 29 01:28:40 2012 CET by the DBLP Team — Data released under the ODC-BY 1.0 license — See also our legal information page