 | 2011 |
| 26 |  | Nicholas Soltau,
Young-Rae Cho:
Assessment of Cluster Overlaps to Improve Accuracy of Module Detection from PPI Networks.
BIBM 2011: 569-573 |
| 25 |  | Edward Casey Kenley,
Young-Rae Cho:
Entropy-Based Graph Clustering: Application to Biological and Social Networks.
ICDM 2011: 1116-1121 |
| 2010 |
| 24 |  | Young-Rae Cho:
Topological analysis of structural roles of proteins in interactome networks.
BCB 2010: 587-593 |
| 23 |  | Lei Shi,
Young-Rae Cho,
Aidong Zhang:
Functional Flow Simulation Based Analysis of Protein Interaction Network.
BIBE 2010: 144-149 |
| 22 |  | Hao Lian,
Chengsen Song,
Young-Rae Cho:
Decomposing protein interactome networks by graph entropy.
BIBM 2010: 585-589 |
| 21 |  | Young-Rae Cho,
Aidong Zhang:
Identification of functional hubs and modules by converting interactome networks into hierarchical ordering of proteins.
BMC Bioinformatics 11(S-3): 3 (2010) |
| 20 |  | Young-Rae Cho,
Aidong Zhang:
Predicting protein function by frequent functional association pattern mining in protein interaction networks.
IEEE Transactions on Information Technology in Biomedicine 14(1): 30-36 (2010) |
| 19 |  | Young-Rae Cho,
Aidong Zhang:
Mining Protein Interactome Networks to Measure Interaction Reliability and Select Hub Proteins.
IJKDB 1(3): 20-35 (2010) |
| 2009 |
| 18 |  | Young-Rae Cho,
Aidong Zhang:
Restructuring Protein Interaction Networks to Reveal Structural Hubs and Functional Organizations.
BIBM 2009: 105-110 |
| 17 |  | Young-Rae Cho,
Lei Shi,
Aidong Zhang:
flowNet: Flow-Based Approach for Efficient Analysis of Complex Biological Networks.
ICDM 2009: 91-100 |
| 16 |  | Pritam Chanda,
Young-Rae Cho,
Aidong Zhang,
Murali Ramanathan:
Mining of Attribute Interactions Using Information Theoretic Metrics.
ICDM Workshops 2009: 350-355 |
| 15 |  | Lei Shi,
Young-Rae Cho,
Aidong Zhang:
ANN Based Protein Function Prediction Using Integrated Protein-Protein Interaction Data.
IJCBS 2009: 271-277 |
| 14 |  | Young-Rae Cho,
Aidong Zhang,
Xian Xu:
Semantic similarity based feature extraction from microarray expression data.
IJDMB 3(3): 333-345 (2009) |
| 2008 |
| 13 |  | Young-Rae Cho,
Aidong Zhang:
Discovering Frequent Patterns of Functional Associations in Protein Interaction Networks for Function Prediction.
BIBM 2008: 59-65 |
| 12 |  | Young-Rae Cho,
Lei Shi,
Murali Ramanathan,
Aidong Zhang:
A probabilistic framework to predict protein function from interaction data integrated with semantic knowledge.
BMC Bioinformatics 9: (2008) |
| 11 |  | Woochang Hwang,
Young-Rae Cho,
Aidong Zhang,
Murali Ramanathan:
CASCADE: a novel quasi all paths-based network analysis algorithm for clustering biological interactions.
BMC Bioinformatics 9: (2008) |
| 10 |  | Young-Rae Cho,
Lei Shi,
Aidong Zhang:
Functional module detection by functional flow pattern mining in protein interaction networks.
BMC Bioinformatics 9(S-10): (2008) |
| 2007 |
| 9 |  | Woochang Hwang,
Taehyong Kim,
Young-Rae Cho,
Aidong Zhang,
Murali Ramanathan:
SIGN: reliable protein interaction identification by integrating the Similarity In GO and the similarity in protein interaction Networks.
BIBE 2007: 1384-1388 |
| 8 |  | Young-Rae Cho,
Woochang Hwang,
Aidong Zhang:
Optimizing Flow-based Modularization by Iterative Centroid Search in Protein Interaction Networks.
BIBE 2007: 342-349 |
| 7 |  | Young-Rae Cho,
Woochang Hwang,
Aidong Zhang:
Modularization of Protein Interaction Networks by Incorporating Gene Ontology Annotations.
CIBCB 2007: 233-238 |
| 6 |  | Young-Rae Cho,
Woochang Hwang,
Aidong Zhang:
Assessing Reliability of Protein-Protein Interactions by Semantic Data Integration.
ICDM Workshops 2007: 83-88 |
| 5 |  | Young-Rae Cho,
Xian Xu,
Woochang Hwang,
Aidong Zhang:
Feature Extraction from Microarray Expression Data by Integration of Semantic Knowledge.
ICMLA 2007: 606-611 |
| 4 |  | Young-Rae Cho,
Woochang Hwang,
Murali Ramanathan,
Aidong Zhang:
Semantic integration to identify overlapping functional modules in protein interaction networks.
BMC Bioinformatics 8: (2007) |
| 2006 |
| 3 |  | Young-Rae Cho,
Woochang Hwang,
Aidong Zhang:
Efficient Modularization of Weighted Protein Interaction Networks using k-Hop Graph Reduction.
BIBE 2006: 289-298 |
| 2 |  | Young-Rae Cho,
Woochang Hwang,
Aidong Zhang:
Identification of Overlapping Functional Modules in Protein Interaction Networks: Information Flow-based Approach.
ICDM Workshops 2006: 147-152 |
| 1 |  | Woochang Hwang,
Young-Rae Cho,
Aidong Zhang,
Murali Ramanathan:
A novel functional module detection algorithm for protein-protein interaction networks.
Algorithms for Molecular Biology 1: (2006) |