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| 2011 | ||
|---|---|---|
| 25 | Pankaj Kumar, Xiao Hua Ma, Xianghui Liu, Jia Jia, Bu-Cong Han, Ying Xue, Ze-Rong Li, Sheng-Yong Yang, Yu-Quan Wei, Yu Zong Chen: Effect of training data size and noise level on support vector machines virtual screening of genotoxic compounds from large compound libraries. Journal of Computer-Aided Molecular Design 25(5): 455-467 (2011) | |
| 2010 | ||
| 24 | Hanbing Rao, Ze-Rong Li, Xiang-Yuan Li, Xiao Hua Ma, Choong Yong Ung, Hu Li, Xianghui Liu, Yu Zong Chen: Identification of small molecule aggregators from large compound libraries by support vector machines. Journal of Computational Chemistry 31(4): 752-763 (2010) | |
| 23 | Xue-Gang Yang, Wei Lv, Yu Zong Chen, Ying Xue: In silico prediction and screening of gamma-secretase inhibitors by molecular descriptors and machine learning methods. Journal of Computational Chemistry 31(6): 1249-1258 (2010) | |
| 22 | Feng Zhu, Bu-Cong Han, Pankaj Kumar, Xianghui Liu, Xiao Hua Ma, XiaoNa Wei, Lu Huang, YangFan Guo, LianYi Han, ChanJuan Zheng, Yu Zong Chen: Update of TTD: Therapeutic Target Database. Nucleic Acids Research 38(Database-Issue): 787-791 (2010) | |
| 2009 | ||
| 21 | Hu Li, Choong Yong Ung, Xiao Hua Ma, Bao Wen Li, Boon Chuan Low, Zhi Wei Cao, Yu Zong Chen: Simulation of crosstalk between small GTPase RhoA and EGFR-ERK signaling pathway via MEKK1. Bioinformatics 25(3): 358-364 (2009) | |
| 20 | Rong Wang, Jian-Sheng Wang, Gui-Rong Liu, Jongyoon Han, Yu Zong Chen: Simulation of DNA electrophoresis in systems of large number of solvent particles by coarse-grained hybrid molecular dynamics approach. Journal of Computational Chemistry 30(4): 505-513 (2009) | |
| 19 | Xue-Gang Yang, Duan Chen, Min Wang, Ying Xue, Yu Zong Chen: Prediction of antibacterial compounds by machine learning approaches. Journal of Computational Chemistry 30(8): 1202-1211 (2009) | |
| 2007 | ||
| 18 | Serene A. K. Ong, Hong Huang Lin, Yu Zong Chen, Ze-Rong Li, Zhi Wei Cao: Efficacy of different protein descriptors in predicting protein functional families. BMC Bioinformatics 8: (2007) | |
| 17 | Jing-Xian Zhang, Wei-Juan Huang, Jing-Hua Zeng, Wen-Hui Huang, Yi Wang, Rui Zhao, Bu-Cong Han, Qing-Feng Liu, Yu Zong Chen, Zhi Liang Ji: DITOP: drug-induced toxicity related protein database. Bioinformatics 23(13): 1710-1712 (2007) | |
| 16 | C. J. Zheng, L. Y. Han, B. Xie, C. Y. Liew, S. Ong, J. Cui, H. L. Zhang, Z. Q. Tang, S. H. Gan, L. Jiang, Yu Zong Chen: PharmGED: Pharmacogenetic Effect Database. Nucleic Acids Research 35(Database-Issue): 794-799 (2007) | |
| 2006 | ||
| 15 | C. Z. Cai, Q. F. Yuan, H. G. Xiao, X. H. Liu, L. Y. Han, Yu Zong Chen: Prediction of Transmembrane Proteins from Their Primary Sequence by Support Vector Machine Approach. ICIC (3) 2006: 525-533 | |
| 14 | H. H. Lin, L. Y. Han, H. L. Zhang, C. J. Zheng, B. Xie, Zhi Wei Cao, Yu Zong Chen: Prediction of the functional class of metal-binding proteins from sequence derived physicochemical properties by support vector machine approach. BMC Bioinformatics 7(S-5): (2006) | |
| 13 | L. Y. Han, Hong Huang Lin, Ze-Rong Li, C. J. Zheng, Zhi Wei Cao, B. Xie, Yu Zong Chen: PEARLS: Program for Energetic Analysis of Receptor-Ligand System. Journal of Chemical Information and Modeling 46(1): 445-450 (2006) | |
| 12 | Ze-Rong Li, Hong Huang Lin, L. Y. Han, L. Jiang, X. Chen, Yu Zong Chen: PROFEAT: a web server for computing structural and physicochemical features of proteins and peptides from amino acid sequence. Nucleic Acids Research 34(Web-Server-Issue): 32-37 (2006) | |
| 2005 | ||
| 11 | Chun Wei Yap, Yu Zong Chen: Prediction of Cytochrome P450 3A4, 2D6, and 2C9 Inhibitors and Substrates by Using Support Vector Machines. Journal of Chemical Information and Modeling 45(4): 982-992 (2005) | |
| 10 | Hu Li, Chun Wei Yap, Choong Yong Ung, Ying Xue, Zhi Wei Cao, Yu Zong Chen: Effect of Selection of Molecular Descriptors on the Prediction of Blood-Brain Barrier Penetrating and Nonpenetrating Agents by Statistical Learning Methods. Journal of Chemical Information and Modeling 45(5): 1376-1384 (2005) | |
| 2004 | ||
| 9 | C. J. Zheng, H. Zhou, B. Xie, L. Y. Han, Chun Wei Yap, Yu Zong Chen: TRMP: a database of therapeutically relevant multiple pathways. Bioinformatics 20(14): 2236-2241 (2004) | |
| 8 | Ying Xue, Chun Wei Yap, Li Zhi Sun, Zhi Wei Cao, J. F. Wang, Yu Zong Chen: Prediction of P-Glycoprotein Substrates by a Support Vector Machine Approach. Journal of Chemical Information and Modeling 44(4): 1497-1505 (2004) | |
| 7 | Ying Xue, Ze-Rong Li, Chun Wei Yap, Li Zhi Sun, Xin Chen, Yu Zong Chen: Effect of Molecular Descriptor Feature Selection in Support Vector Machine Classification of Pharmacokinetic and Toxicological Properties of Chemical Agents. Journal of Chemical Information and Modeling 44(5): 1630-1638 (2004) | |
| 6 | Zhi Wei Cao, Ying Xue, L. Y. Han, B. Xie, H. Zhou, C. J. Zheng, Hong Huang Lin, Yu Zong Chen: MoViES: molecular vibrations evaluation server for analysis of fluctuational dynamics of proteins and nucleic acids. Nucleic Acids Research 32(Web-Server-Issue): 679-685 (2004) | |
| 2003 | ||
| 5 | Zhi Liang Ji, X. Chen, C. J. Zheng, L. X. Yao, L. Y. Han, W. K. Yeo, P. C. Chung, H. S. Puy, Y. T. Tay, A. Muhammad, Yu Zong Chen: KDBI: Kinetic Data of Bio-molecular Interactions database. Nucleic Acids Research 31(1): 255-257 (2003) | |
| 4 | C. Z. Cai, L. Y. Han, Zhi Liang Ji, X. Chen, Yu Zong Chen: SVM-Prot: web-based support vector machine software for functional classification of a protein from its primary sequence. Nucleic Acids Research 31(13): 3692-3697 (2003) | |
| 2002 | ||
| 3 | Li Zhi Sun, Zhi Liang Ji, Xin Chen, J. F. Wang, Yu Zong Chen: ADME-AP: a database of ADME associated proteins. Bioinformatics 18(12): 1699-1700 (2002) | |
| 2 | X. Chen, Zhi Liang Ji, D. G. Zhi, Yu Zong Chen: CLiBE: A Database of Computed Ligand Binding Energy for Ligand-receptor Complexes. Computers & Chemistry 26(6): 661-666 (2002) | |
| 1 | X. Chen, Zhi Liang Ji, Yu Zong Chen: TTD: Therapeutic Target Database. Nucleic Acids Research 30(1): 412-415 (2002) | |
Colors in the list of coauthors
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