Jake Yue Chen

Jake Y. Chen

	2012
37		Mohammad Al Hasan, Jun Huan, Jake Yue Chen, Mohammed J. Zaki: Biological knowledge discovery and data mining. Scientific Programming 20(1): 1-2 (2012)
	2011
36		Liang-Chin Huang, Jake Yue Chen: A Network Biology Approach to Predicting Drug Cardiotoxicity. BIBM 2011: 278-281
35		Ping Wan, Jun Wu, Yuan Zhou, Junshu Xiao, Jie Feng, Weizhong Zhao, Shen Xiang, Guanglong Jiang, Jake Y. Chen: Computational Analysis of Drought Stress-Associated miRNAs and miRNA Co-Regulation Network in Physcomitrella patens. Genomics, Proteomics & Bioinformatics 9(1-2): 37-44 (2011)
	2010
34		Fan Zhang, Mu Wang, Jake Y. Chen: Breast cancer plasma protein biomarker discovery by coupling LC-MS/MS proteomics and systems biology. BCB 2010: 463-465
33		Mingyi Wang, Jake Y. Chen: A GMM-IG framework for selecting genes as expression panel biomarkers. Artificial Intelligence in Medicine 48(2-3): 75-82 (2010)
32		Stefano Lonardi, Jake Yue Chen: Data Mining in Bioinformatics: Selected Papers from BIOKDD. IEEE/ACM Trans. Comput. Biology Bioinform. 7(2): 195-196 (2010)
31		Jiao Li, Xiaoyan Zhu, Jake Yue Chen: Discovering breast cancer drug candidates from biomedical literature. IJDMB 4(3): 241-255 (2010)
30		Qian You, Shiaofen Fang, Jake Yue Chen: GeneTerrain: Visual exploration of differential gene expression profiles organized in native biomolecular interaction networks. Information Visualization 9(1): 1-12 (2010)
	2009
29		Jieun Jeong, Jake Y. Chen: RIC: Ranking with Interaction Chains and Its Application in Computational Clinical Proteomics Studies. BIBM 2009: 216-221
28		Fan Zhang, Jake Y. Chen: A neural network approach to multi-biomarker panel development based on LC/MS/MS proteomics profiles: A case study in breast cancer. CBMS 2009: 1-6
27		John A. Springer, Jake Y. Chen: Toward Ontology-Driven Omics Data Integration in Current Database Management Systems. NBiS 2009: 292-297
26		Qian You, Shiaofen Fang, Snehasis Mukhopadhyay, Harsha Gopal Goud Vaka, Jake Yue Chen: Visualizing a Correlative Multi-level Graph of Biology Entity Interactions. NBiS 2009: 304-309
25		Jiao Li, Pamela Crowell, Jake Yue Chen: Construct anticancer drug-drug correlation network. SAC 2009: 771-775
24		Jake Y. Chen, Shailaja Taduri, Frank Lloyd: Design of an Online Physician-Mediated Personal Health Record System. Biomedical Data and Applications 2009: 265-279
23		Sudhir R. Chowbina, Xiaogang Wu, Fan Zhang, Peter M. Li, Ragini Pandey, Harini N. Kasamsetty, Jake Y. Chen: HPD: an online integrated human pathway database enabling systems biology studies. BMC Bioinformatics 10(S-11): 5 (2009)
22		Huajun Chen, Li Ding, Zhaohui Wu, Tong Yu, Lavanya Dhanapalan, Jake Yue Chen: Semantic web for integrated network analysis in biomedicine. Briefings in Bioinformatics 10(2): 177-192 (2009)
21		Xiaogang Wu, Tianxiao Huan, Ragini Pandey, Tianshou Zhou, Jake Y. Chen: Finding fractal patterns in molecular interaction networks: a case study in Alzheimer's disease. I. J. Computational Biology and Drug Design 2(4): 340-352 (2009)
20		Jiao Li, Xiaoyan Zhu, Jake Yue Chen: Building Disease-Specific Drug-Protein Connectivity Maps from Molecular Interaction Networks and PubMed Abstracts. PLoS Computational Biology 5(7): (2009)
	2008
19		Mingyi Wang, Jake Y. Chen: Gene Selection using the GMM-IG Framework based Integrative Analysis. BMEI (1) 2008: 292-296
18		Jiao Li, Xiaoyan Zhu, Jake Yue Chen: Mining disease-specific molecular association profiles from biomedical literature: a case study. SAC 2008: 1287-1291
17		Harini N. Kasamsetty, Xiaogang Wu, Jake Yue Chen: Towards an integrative human pathway database for systems biology applications. SAC 2008: 1297-1301
16		Tianxiao Huan, Andrey Y. Sivachenko, Scott H. Harrison, Jake Yue Chen: ProteoLens: a visual analytic tool for multi-scale database-driven biological network data mining. BMC Bioinformatics 9(S-9): (2008)
15		Jake Y. Chen, Mohammed Javeed Zaki, Stefano Lonardi: BIOKDD 2008: a workshop report on data mining in bioinformatics. SIGKDD Explorations 10(2): 51-53 (2008)
	2007
14		Lavanya Dhanapalan, Jake Yue Chen: A case study of integrating protein interaction data using semantic web technology. IJBRA 3(3): 286-302 (2007)
13		Jake Yue Chen, Zhong Yan, Changyu Shen, Dawn P. G. Fitzpatrick, Mu Wang: A Systems Biology Approach to the Study of cisplatin Drug Resistance in Ovarian cancers. J. Bioinformatics and Computational Biology 5(2a): 383-405 (2007)
12		Megan Sickmeier, Justin A. Hamilton, Tanguy LeGall, Vladimir Vacic, Marc S. Cortese, Agnes Tantos, Beata Szabo, Peter Tompa, Jake Yue Chen, Vladimir N. Uversky, Zoran Obradovic, A. Keith Dunker: DisProt: the Database of Disordered Proteins. Nucleic Acids Research 35(Database-Issue): 786-793 (2007)
	2006
11		Jake Yue Chen, Changyu Shen, Andrey Y. Sivachenko: Mining Alzheimer Disease Relevant Proteins from Integrated Protein Interactome Data. Pacific Symposium on Biocomputing 2006: 367-378
10		Jake Yue Chen, Sarah L. Pinkerton, Changyu Shen, Mu Wang: An integrated computational proteomics method to extract protein targets for Fanconi Anemia studies. SAC 2006: 173-179
	2005
9		Changyu Shen, Lang Li, Jake Yue Chen: Discover True Association Rates in Multi-protein Complex Proteomics Data Sets. CSB 2005: 167-174
8		Jake Yue Chen, John V. Carlis, Ning Gao: A complex biological database querying method. SAC 2005: 110-114
7		Susie Stephens, Jake Yue Chen, Marcel G. Davidson, Shiby Thomas, Barry M. Trute: Oracle Database 10g: a platform for BLAST search and Regular Expression pattern matching in life sciences. Nucleic Acids Research 33(Database-Issue): 675-679 (2005)
	2004
6		Jake Yue Chen, Andrey Y. Sivachenko, Lang Li: High-throughput Protein Interactome Data: Minable or Not? BIOKDD 2004: 18-23
5		Warren T. Jones, Mathew J. Palakal, Jake Yue Chen: Editorial message: special track on bioinformatics. SAC 2004: 101
4		Susie Stephens, Jake Yue Chen, Shiby Thomas: ODM BLAST: Sequence Homology Search in the RDBMS. IEEE Data Eng. Bull. 27(3): 20-23 (2004)
	2003
3		Jake Yue Chen, Andrey Y. Sivachenko, Russell Bell, Cornelia Kurschner, Irene Ota, Sudhir Sahasrabudhe: Initial Large-scale Exploration of Protein-protein Interactions in Human Brain. CSB 2003: 229-234
2		Jake Yue Chen, John V. Carlis: Similar_Join: Extending DBMS with a Bio-specific Operator. SAC 2003: 109-114
1		Jake Yue Chen, John V. Carlis: Genomic data modeling. Inf. Syst. 28(4): 287-310 (2003)

Coauthor Index

1	Russell Bell	[3]
2	John V. Carlis	[1] [2] [8]
3	Huajun Chen	[22]
4	Sudhir R. Chowbina	[23]
5	Marc S. Cortese	[12]
6	Pamela Crowell	[25]
7	Marcel G. Davidson	[7]
8	Lavanya Dhanapalan	[14] [22]
9	Li Ding	[22]
10	A. Keith Dunker	[12]
11	Shiaofen Fang	[26] [30]
12	Jie Feng	[35]
13	Dawn P. G. Fitzpatrick	[13]
14	Ning Gao	[8]
15	Justin A. Hamilton	[12]
16	Scott H. Harrison	[16]
17	Mohammad Al Hasan	[37]
18	Jun Huan (Luke Huan)	[37]
19	Tianxiao Huan	[16] [21]
20	Liang-Chin Huang	[36]
21	Jieun Jeong	[29]
22	Guanglong Jiang	[35]
23	Warren T. Jones	[5]
24	Harini N. Kasamsetty	[17] [23]
25	Cornelia Kurschner	[3]
26	Tanguy LeGall	[12]
27	Jiao Li	[18] [20] [25] [31]
28	Lang Li	[6] [9]
29	Peter M. Li	[23]
30	Frank Lloyd	[24]
31	Stefano Lonardi	[15] [32]
32	Snehasis Mukhopadhyay	[26]
33	Zoran Obradovic	[12]
34	Irene Ota	[3]
35	Mathew J. Palakal (Mathew Palakal)	[5]
36	Ragini Pandey	[21] [23]
37	Sarah L. Pinkerton	[10]
38	Sudhir Sahasrabudhe	[3]
39	Changyu Shen	[9] [10] [11] [13]
40	Megan Sickmeier	[12]
41	Andrey Y. Sivachenko	[3] [6] [11] [16]
42	John A. Springer	[27]
43	Susie Stephens	[4] [7]
44	Beata Szabo	[12]
45	Shailaja Taduri	[24]
46	Agnes Tantos	[12]
47	Shiby Thomas	[4] [7]
48	Peter Tompa	[12]
49	Barry M. Trute	[7]
50	Vladimir N. Uversky	[12]
51	Vladimir Vacic	[12]
52	Harsha Gopal Goud Vaka	[26]
53	Ping Wan	[35]
54	Mingyi Wang	[19] [33]
55	Mu Wang	[10] [13] [34]
56	Jun Wu	[35]
57	Xiaogang Wu	[17] [21] [23]
58	Zhaohui Wu	[22]
59	Shen Xiang	[35]
60	Junshu Xiao	[35]
61	Zhong Yan	[13]
62	Qian You	[26] [30]
63	Tong Yu	[22]
64	Mohammed Javeed Zaki (Mohammed J. Zaki)	[15] [37]
65	Fan Zhang	[23] [28] [34]
66	Weizhong Zhao	[35]
67	Tianshou Zhou	[21]
68	Yuan Zhou	[35]
69	Xiaoyan Zhu	[18] [20] [31]

Colors in the list of coauthors

Last update Tue May 29 01:28:40 2012 CET by the DBLP Team — Data released under the ODC-BY 1.0 license — See also our legal information page