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| 2012 | ||
|---|---|---|
| 45 | Mathilde Bouvel, Cedric Chauve, Marni Mishna, Dominique Rossin: Average-case analysis of perfect sorting by reversals (Journal Version) CoRR abs/1201.0940: (2012) | |
| 44 | Jean-Philippe Doyon, Sylvie Hamel, Cedric Chauve: An Efficient Method for Exploring the Space of Gene Tree/Species Tree Reconciliations in a Probabilistic Framework. IEEE/ACM Trans. Comput. Biology Bioinform. 9(1): 26-39 (2012) | |
| 2011 | ||
| 43 | Cedric Chauve, Ján Manuch, Murray Patterson, Roland Wittler: Tractability Results for the Consecutive-Ones Property with Multiplicity. CPM 2011: 90-103 | |
| 42 | Aïda Ouangraoua, Eric Tannier, Cedric Chauve: Reconstructing the architecture of the ancestral amniote genome. Bioinformatics 27(19): 2664-2671 (2011) | |
| 41 | Haris Gavranovic, Cedric Chauve, Jérôme Salse, Eric Tannier: Mapping ancestral genomes with massive gene loss: A matrix sandwich problem. Bioinformatics [ISMB/ECCB] 27(13): 257-265 (2011) | |
| 40 | Mehrnoush Malekesmaeili, Cedric Chauve, Tamon Stephen: A tight bound on the length of odd cycles in the incompatibility graph of a non-C1P matrix CoRR abs/1109.0562: (2011) | |
| 39 | Ahmad Mahmoody-Ghaidary, Cedric Chauve, Ladislav Stacho: Tractability results for the Double-Cut-and-Join circular median problem CoRR abs/1111.5872: (2011) | |
| 38 | Aïda Ouangraoua, Valentin Guignon, Sylvie Hamel, Cedric Chauve: A new algorithm for aligning nested arc-annotated sequences under arbitrary weight schemes. Theor. Comput. Sci. 412(8-10): 753-764 (2011) | |
| 2010 | ||
| 37 | Haitao Jiang, Cedric Chauve, Binhai Zhu: Breakpoint Distance and PQ-Trees. CPM 2010: 112-124 | |
| 36 | Julien Allali, Cedric Chauve, Pascal Ferraro, Anne-Laure Gaillard: Efficient Chaining of Seeds in Ordered Trees. IWOCA 2010: 260-273 | |
| 35 | Aïda Ouangraoua, Krister M. Swenson, Cedric Chauve: An Approximation Algorithm for Computing a Parsimonious First Speciation in the Gene Duplication Model. RECOMB-CG 2010: 290-301 | |
| 2009 | ||
| 34 | Mathilde Bouvel, Cedric Chauve, Marni Mishna, Dominique Rossin: Average-Case Analysis of Perfect Sorting by Reversals. CPM 2009: 314-325 | |
| 33 | Aïda Ouangraoua, Frédéric Boyer, Andrew McPherson, Eric Tannier, Cedric Chauve: Prediction of Contiguous Regions in the Amniote Ancestral Genome. ISBRA 2009: 173-185 | |
| 32 | Cedric Chauve, Nadia El-Mabrouk: New Perspectives on Gene Family Evolution: Losses in Reconciliation and a Link with Supertrees. RECOMB 2009: 46-58 | |
| 31 | Cedric Chauve, Utz-Uwe Haus, Tamon Stephen, Vivija P. You: Minimal Conflicting Sets for the Consecutive Ones Property in Ancestral Genome Reconstruction. RECOMB-CG 2009: 48-58 | |
| 30 | Mathilde Bouvel, Cedric Chauve, Marni Mishna, Dominique Rossin: Average-case analysis of perfect sorting by reversals CoRR abs/0901.2847: (2009) | |
| 29 | Cedric Chauve, Aïda Ouangraoua: A 3-approximation algorithm for computing a parsimonious first speciation in the gene duplication model CoRR abs/0904.1645: (2009) | |
| 28 | Cedric Chauve, Ján Manuch, Murray Patterson: Hardness Results for the Gapped Consecutive-Ones Property CoRR abs/0912.0309: (2009) | |
| 27 | Cedric Chauve, Ján Manuch, Murray Patterson: On the Gapped Consecutive-Ones Property. Electronic Notes in Discrete Mathematics 34: 121-125 (2009) | |
| 2008 | ||
| 26 | Jean-Philippe Doyon, Cedric Chauve, Sylvie Hamel: Algorithms for Exploring the Space of Gene Tree/Species Tree Reconciliations. RECOMB-CG 2008: 1-13 | |
| 25 | Sèverine Bérard, Annie Chateau, Cedric Chauve, Christophe Paul, Eric Tannier: Perfect DCJ Rearrangement. RECOMB-CG 2008: 158-169 | |
| 24 | Sèverine Bérard, Cedric Chauve, Christophe Paul: A more efficient algorithm for perfect sorting by reversals. Inf. Process. Lett. 106(3): 90-95 (2008) | |
| 23 | Cedric Chauve, Jean-Philippe Doyon, Nadia El-Mabrouk: Gene Family Evolution by Duplication, Speciation, and Loss. Journal of Computational Biology 15(8): 1043-1062 (2008) | |
| 22 | Cedric Chauve, Eric Tannier: A Methodological Framework for the Reconstruction of Contiguous Regions of Ancestral Genomes and Its Application to Mammalian Genomes. PLoS Computational Biology 4(11): (2008) | |
| 21 | Anne Bergeron, Cedric Chauve, Fabien de Montgolfier, Mathieu Raffinot: Computing Common Intervals of K Permutations, with Applications to Modular Decomposition of Graphs. SIAM J. Discrete Math. 22(3): 1022-1039 (2008) | |
| 2007 | ||
| 20 | Mahdi Belcaid, Anne Bergeron, Annie Chateau, Cedric Chauve, Yannick Gingras, Guylaine Poisson, M. Vendette: Exploring Genome Rearrangements using Virtual Hybridization. APBC 2007: 205-214 | |
| 19 | Cedric Chauve, Jean-Philippe Doyon, Nadia El-Mabrouk: Inferring a Duplication, Speciation and Loss History from a Gene Tree (Extended Abstract). RECOMB-CG 2007: 45-57 | |
| 18 | Guylaine Poisson, Cedric Chauve, Xin Chen, Anne Bergeron: FragAnchor: A Large-Scale Predictor of Glycosylphosphatidylinositol Anchors in Eukaryote Protein Sequences by Qualitative Scoring. Genomics, Proteomics & Bioinformatics 5(2): 121-130 (2007) | |
| 17 | Sèverine Bérard, Anne Bergeron, Cedric Chauve, Christophe Paul: Perfect Sorting by Reversals Is Not Always Difficult. IEEE/ACM Trans. Comput. Biology Bioinform. 4(1): 4-16 (2007) | |
| 16 | Guillaume Blin, Cedric Chauve, Guillaume Fertin, Romeo Rizzi, Stéphane Vialette: Comparing Genomes with Duplications: A Computational Complexity Point of View. IEEE/ACM Trans. Comput. Biology Bioinform. 4(4): 523-534 (2007) | |
| 2006 | ||
| 15 | Guillaume Blin, Annie Chateau, Cedric Chauve, Yannick Gingras: Inferring Positional Homologs with Common Intervals of Sequences. Comparative Genomics 2006: 24-38 | |
| 14 | Cedric Chauve, Guillaume Fertin, Romeo Rizzi, Stéphane Vialette: Genomes Containing Duplicates Are Hard to Compare. International Conference on Computational Science (2) 2006: 783-790 | |
| 2005 | ||
| 13 | Guillaume Blin, Cedric Chauve, Guillaume Fertin: Genes Order and Phylogenetic Reconstruction: Application to gamma-Proteobacteria. Comparative Genomics 2005: 11-20 | |
| 12 | Anne Bergeron, Cedric Chauve, Fabien de Montgolfier, Mathieu Raffinot: Computing Common Intervals of K Permutations, with Applications to Modular Decomposition of Graphs. ESA 2005: 779-790 | |
| 11 | Valentin Guignon, Cedric Chauve, Sylvie Hamel: An Edit Distance Between RNA Stem-Loops. SPIRE 2005: 335-347 | |
| 10 | Sèverine Bérard, Anne Bergeron, Cedric Chauve, Christophe Paul: Perfect Sorting by Reversals Is Not Always Difficult. WABI 2005: 228-238 | |
| 2004 | ||
| 9 | Sèverine Bérard, Anne Bergeron, Cedric Chauve: Conservation of Combinatorial Structures in Evolution Scenarios. Comparative Genomics 2004: 1-14 | |
| 8 | Anne Bergeron, Mathieu Blanchette, Annie Chateau, Cedric Chauve: Reconstructing Ancestral Gene Orders Using Conserved Intervals. WABI 2004: 14-25 | |
| 7 | Cedric Chauve, Guillaume Fertin: On maximal instances for the original syntenic distance. Theor. Comput. Sci. 326(1-3): 29-43 (2004) | |
| 2003 | ||
| 6 | Cedric Chauve: Constellations are Lagrangian objects: a bijective proof. Discrete Mathematics & Theoretical Computer Science 6(1): 13-40 (2003) | |
| 5 | Michel Bousquet, Cedric Chauve, Gilbert Labelle, Pierre Leroux: Two bijective proofs for the arborescent form of the Good-Lagrange formula and some applications to colored rooted trees and cacti. Theor. Comput. Sci. 307(2): 277-302 (2003) | |
| 2002 | ||
| 4 | Cedric Chauve: Tree Pattern Matching for Linear Static Terms. SPIRE 2002: 160-169 | |
| 3 | Cedric Chauve, Serge Dulucq: A geometric version of the Robinson-Schensted correspondence for skew oscillating tableaux. Discrete Mathematics 246(1-3): 67-81 (2002) | |
| 2 | Cedric Chauve: Tree pattern matching with a more general notion of occurrence of the pattern. Inf. Process. Lett. 82(4): 197-201 (2002) | |
| 2001 | ||
| 1 | Cedric Chauve, Serge Dulucq, Andrew Rechnitzer: Enumerating Alternating Trees. J. Comb. Theory, Ser. A 94(1): 142-151 (2001) | |
Colors in the list of coauthors
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