 | 2012 |
| 22 |  | Fabien Corblin,
Eric Fanchon,
Laurent Trilling,
Claudine Chaouiya,
Denis Thieffry:
Automatic Inference of Regulatory and Dynamical Properties from Incomplete Gene Interaction and Expression Data.
IPCAT 2012: 25-30 |
| 2011 |
| 21 |  | Beatriz Luna,
Claudine Chaouiya:
Relating Formalisms for the Qualitative Modelling of Regulatory Networks.
PACBB 2011: 293-302 |
| 20 |  | Claudine Chaouiya,
Aurélien Naldi,
Elisabeth Remy,
Denis Thieffry:
Petri net representation of multi-valued logical regulatory graphs.
Natural Computing 10(2): 727-750 (2011) |
| 19 |  | Aurélien Naldi,
Elisabeth Remy,
Denis Thieffry,
Claudine Chaouiya:
Dynamically consistent reduction of logical regulatory graphs.
Theor. Comput. Sci. 412(21): 2207-2218 (2011) |
| 2010 |
| 18 |  | Claudine Chaouiya,
Monika Heiner:
Introduction.
ACSD/Petri Nets Workshops 2010: 5-6 |
| 17 |  | Claudine Chaouiya,
Aurélien Naldi,
Elisabeth Remy,
Denis Thieffry:
Reduction of Logical Models of Regulatory Networks Yields Insight into Dynamical properties.
CCA 2010: 524-529 |
| 16 |  | Aurélien Naldi,
Jorge Carneiro,
Claudine Chaouiya,
Denis Thieffry:
Diversity and Plasticity of Th Cell Types Predicted from Regulatory Network Modelling.
PLoS Computational Biology 6(9): (2010) |
| 2009 |
| 15 |  | Aurélien Naldi,
Elisabeth Remy,
Denis Thieffry,
Claudine Chaouiya:
A Reduction of Logical Regulatory Graphs Preserving Essential Dynamical Properties.
CMSB 2009: 266-280 |
| 14 |  | Aurélien Naldi,
D. Berenguier,
Adrien Fauré,
F. Lopez,
Denis Thieffry,
Claudine Chaouiya:
Logical modelling of regulatory networks with GINsim 2.3.
Biosystems 97(2): 134-139 (2009) |
| 2008 |
| 13 |  | Aitor Gonzalez,
Claudine Chaouiya,
Denis Thieffry:
Logical modelling of the role of the Hh pathway in the patterning of the Drosophila wing disc.
ECCB 2008: 234-240 |
| 12 |  | Claudine Chaouiya,
Elisabeth Remy,
Denis Thieffry:
Petri net modelling of biological regulatory networks.
J. Discrete Algorithms 6(2): 165-177 (2008) |
| 2007 |
| 11 |  | Aurélien Naldi,
Denis Thieffry,
Claudine Chaouiya:
Decision Diagrams for the Representation and Analysis of Logical Models of Genetic Networks.
CMSB 2007: 233-247 |
| 10 |  | Adrien Fauré,
Claudine Chaouiya,
Andrea Ciliberto,
Denis Thieffry:
Logical modelling and analysis of the budding yeast cell cycle.
BMC Bioinformatics 8(S-8): (2007) |
| 9 |  | Claudine Chaouiya:
Petri net modelling of biological networks.
Briefings in Bioinformatics 8(4): 210-219 (2007) |
| 8 |  | Claudine Chaouiya:
Chronique : Réseaux de Petri et modélisation en biologie moléculaire.
Technique et Science Informatiques 26(1-2): 229-236 (2007) |
| 2006 |
| 7 |  | Adrien Fauré,
Aurélien Naldi,
Claudine Chaouiya,
Denis Thieffry:
Dynamical analysis of a generic Boolean model for the control of the mammalian cell cycle.
ISMB (Supplement of Bioinformatics) 2006: 124-131 |
| 6 |  | Elisabeth Remy,
Paul Ruet,
Luis Eduardo Mendoza,
Denis Thieffry,
Claudine Chaouiya:
From Logical Regulatory Graphs to Standard Petri Nets: Dynamical Roles and Functionality of Feedback Circuits.
T. Comp. Sys. Biology: 56-72 (2006) |
| 5 |  | Claudine Chaouiya,
Elisabeth Remy,
Denis Thieffry:
Qualitative Petri Net Modelling of Genetic Networks.
T. Comp. Sys. Biology: 95-112 (2006) |
| 2005 |
| 4 |  | E. Simão,
Elisabeth Remy,
Denis Thieffry,
Claudine Chaouiya:
Qualitative modelling of regulated metabolic pathways: application to the tryptophan biosynthesis in E.Coli.
ECCB/JBI 2005: 196 |
| 2004 |
| 3 |  | Claudine Chaouiya,
Elisabeth Remy,
Paul Ruet,
Denis Thieffry:
Qualitative Modelling of Genetic Networks: From Logical Regulatory Graphs to Standard Petri Nets.
ICATPN 2004: 137-156 |
| 2003 |
| 2 |  | Elisabeth Remy,
Brigitte Mossé,
Claudine Chaouiya,
Denis Thieffry:
A description of dynamical graphs associated to elementary regulatory circuits.
ECCB 2003: 172-178 |
| 1 |  | Claudine Chaouiya,
Elisabeth Remy,
Brigitte Mossé,
Denis Thieffry:
Qualitative Analysis of Regulatory Graphs: A Computational Tool Based on a Discrete Formal Framework.
POSTA 2003: 119-126 |