Amedeo Caflisch

	2011
18		Michele Seeber, Angelo Felline, Francesco Raimondi, Stefanie Muff, Ran Friedman, Francesco Rao, Amedeo Caflisch, Francesca Fanelli: Wordom: A user-friendly program for the analysis of molecular structures, trajectories, and free energy surfaces. Journal of Computational Chemistry 32(6): 1183-1194 (2011)
17		Danzhi Huang, Amedeo Caflisch: The Free Energy Landscape of Small Molecule Unbinding. PLoS Computational Biology 7(2): (2011)
	2010
16		Danzhi Huang, Ting Zhou, Karine Lafleur, Cristina Nevado, Amedeo Caflisch: Kinase selectivity potential for inhibitors targeting the ATP binding site: a network analysis. Bioinformatics 26(2): 198-204 (2010)
	2009
15		Bernard R. Brooks, Charles L. Brooks III, Alexander D. MacKerell Jr., L. Nilsson, Robert J. Petrella, Benoît Roux, Y. Won, G. Archontis, Christian Bartels, S. Boresch, Amedeo Caflisch, Leo S. D. Caves, Qiang Cui, Aaron R. Dinner, Michael Feig, S. Fischer, Jiali Gao, Milan Hodoscek, Wonpil Im, Krzysztof Kuczera, Themis Lazaridis, J. Ma, V. Ovchinnikov, Emanuele Paci, Richard W. Pastor, C. B. Post, J. Z. Pu, Michael Schaefer, Bruce Tidor, Richard M. Venable, H. Lee Woodcock III, X. Wu, W. Yang, Darrin M. York, Martin Karplus: CHARMM: The biomolecular simulation program. Journal of Computational Chemistry 30(10): 1545-1614 (2009)
	2008
14		Philipp Schuetz, Amedeo Caflisch: Multistep greedy algorithm identifies community structure in real-world and computer-generated networks CoRR abs/0809.4398: (2008)
13		Urs Haberthür, Amedeo Caflisch: FACTS: Fast analytical continuum treatment of solvation. Journal of Computational Chemistry 29(5): 701-715 (2008)
	2007
12		Michele Seeber, Marco Cecchini, Francesco Rao, Giovanni Settanni, Amedeo Caflisch: Wordom: a program for efficient analysis of molecular dynamics simulations. Bioinformatics 23(19): 2625-2627 (2007)
11		Philipp Schuetz, Amedeo Caflisch: Efficient Modularity Optimization: Multi-Step Greedy Algorithm and Vertex Mover Refinement CoRR abs/0712.1163: (2007)
	2004
10		Marco Cecchini, Peter Kolb, Nicolas Majeux, Amedeo Caflisch: Automated docking of highly flexible ligands by genetic algorithms: A critical assessment. Journal of Computational Chemistry 25(3): 412-422 (2004)
	2003
9		Bennet Uk, Michela Taufer, Thomas Stricker, Giovanni Settanni, Andrea Cavalli, Amedeo Caflisch: Combining Task- and Data Parallelism to Speed up Protein Folding on a Desktop Grid Platform. CCGRID 2003: 240-
8		Urs Haberthür, Nicolas Majeux, Philipp Werner, Amedeo Caflisch: Efficient evaluation of the effective dielectric function of a macromolecule in aqueous solution. Journal of Computational Chemistry 24(15): 1936-1949 (2003)
	2002
7		Michela Taufer, Egon Perathoner, Andrea Cavalli, Amedeo Caflisch, Thomas Stricker: Performance Characterization of a Molecular Dynamics Code on PC Clusters: Is There Any Easy Parallelism in CHARMM?. IPDPS 2002
	2001
6		Nicolas Budin, Nicolas Majeux, Catherine Tenette-Souaille, Amedeo Caflisch: Structure-based ligand design by a build-up approach and genetic algorithm search in conformational space. Journal of Computational Chemistry 22(16): 1956-1970 (2001)
	2000
5		Amedeo Caflisch, Hans J. Schramm, Martin Karplus: Design of dimerization inhibitors of HIV-1 aspartic proteinase: A computer-based combinatorial approach. Journal of Computer-Aided Molecular Design 14(2): 161-179 (2000)
	1999
4		Marco Scarsi, Amedeo Caflisch: Comment on the validation of continuum electrostatics models. Journal of Computational Chemistry 20(14): 1533-1536 (1999)
	1998
3		Joannis Apostolakis, Andreas Plückthun, Amedeo Caflisch: Docking small ligands in flexible binding sites. Journal of Computational Chemistry 19(1): 21-37 (1998)
	1997
2		Amedeo Caflisch, Stefan Fischer, Martin Karplus: Docking by Monte Carlo minimization with a solvation correction: Application to an FKBP - substrate complex. Journal of Computational Chemistry 18(6): 723-743 (1997)
	1996
1		Amedeo Caflisch: Computational combinatorial ligand design: Application to human alpha-thrombin. Journal of Computer-Aided Molecular Design 10(5): 372-396 (1996)

Coauthor Index

1	Joannis Apostolakis	[3]
2	G. Archontis	[15]
3	Christian Bartels	[15]
4	S. Boresch	[15]
5	Bernard R. Brooks	[15]
6	Charles L. Brooks III	[15]
7	Nicolas Budin	[6]
8	Andrea Cavalli	[7] [9]
9	Leo S. D. Caves	[15]
10	Marco Cecchini	[10] [12]
11	Qiang Cui	[15]
12	Aaron R. Dinner	[15]
13	Francesca Fanelli	[18]
14	Michael Feig	[15]
15	Angelo Felline	[18]
16	S. Fischer	[15]
17	Stefan Fischer	[2]
18	Ran Friedman	[18]
19	Jiali Gao	[15]
20	Urs Haberthür	[8] [13]
21	Milan Hodoscek	[15]
22	Danzhi Huang	[16] [17]
23	Wonpil Im	[15]
24	Martin Karplus	[2] [5] [15]
25	Peter Kolb	[10]
26	Krzysztof Kuczera	[15]
27	Karine Lafleur	[16]
28	Themis Lazaridis	[15]
29	J. Ma	[15]
30	Alexander D. MacKerell Jr.	[15]
31	Nicolas Majeux	[6] [8] [10]
32	Stefanie Muff	[18]
33	Cristina Nevado	[16]
34	L. Nilsson	[15]
35	V. Ovchinnikov	[15]
36	Emanuele Paci	[15]
37	Richard W. Pastor	[15]
38	Egon Perathoner	[7]
39	Robert J. Petrella	[15]
40	Andreas Plückthun	[3]
41	C. B. Post	[15]
42	J. Z. Pu	[15]
43	Francesco Raimondi	[18]
44	Francesco Rao	[12] [18]
45	Benoît Roux	[15]
46	Marco Scarsi	[4]
47	Michael Schaefer	[15]
48	Hans J. Schramm	[5]
49	Philipp Schuetz	[11] [14]
50	Michele Seeber	[12] [18]
51	Giovanni Settanni	[9] [12]
52	Thomas Stricker	[7] [9]
53	Michela Taufer	[7] [9]
54	Catherine Tenette-Souaille	[6]
55	Bruce Tidor	[15]
56	Bennet Uk	[9]
57	Richard M. Venable	[15]
58	Philipp Werner	[8]
59	Y. Won	[15]
60	H. Lee Woodcock III	[15]
61	X. Wu	[15]
62	W. Yang	[15]
63	Darrin M. York	[15]
64	Ting Zhou	[16]

Colors in the list of coauthors

Last update Sun May 27 04:04:01 2012 CET by the DBLP Team — Data released under the ODC-BY 1.0 license — See also our legal information page