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| 2012 | ||
|---|---|---|
| 12 | Pradip K. Biswas, Nadeem A. Vellore, Jeremy A. Yancey, Tugba G. Kucukkal, Galen Collier, Bernard R. Brooks, Steven J. Stuart, Robert A. Latour: Simulation of multiphase systems utilizing independent force fields to control intraphase and interphase behavior. Journal of Computational Chemistry 33(16): 1458-1466 (2012) | |
| 2011 | ||
| 11 | Urban Borstnik, Benjamin T. Miller, Bernard R. Brooks, Dusanka Janezic: The distributed diagonal force decomposition method for parallelizing molecular dynamics simulations. Journal of Computational Chemistry 32(14): 3005-3013 (2011) | |
| 2010 | ||
| 10 | An Ghysels, Veronique Van Speybroeck, Ewald Pauwels, Saron Catak, Bernard R. Brooks, Dimitri Van Neck, Michel Waroquier: Comparative study of various normal mode analysis techniques based on partial Hessians. Journal of Computational Chemistry 31(5): 994-1007 (2010) | |
| 2009 | ||
| 9 | Bernard R. Brooks, Charles L. Brooks III, Alexander D. MacKerell Jr., L. Nilsson, Robert J. Petrella, Benoît Roux, Y. Won, G. Archontis, Christian Bartels, S. Boresch, Amedeo Caflisch, Leo S. D. Caves, Qiang Cui, Aaron R. Dinner, Michael Feig, S. Fischer, Jiali Gao, Milan Hodoscek, Wonpil Im, Krzysztof Kuczera, Themis Lazaridis, J. Ma, V. Ovchinnikov, Emanuele Paci, Richard W. Pastor, C. B. Post, J. Z. Pu, Michael Schaefer, Bruce Tidor, Richard M. Venable, H. Lee Woodcock III, X. Wu, W. Yang, Darrin M. York, Martin Karplus: CHARMM: The biomolecular simulation program. Journal of Computational Chemistry 30(10): 1545-1614 (2009) | |
| 8 | Edina Rosta, H. Lee Woodcock III, Bernard R. Brooks, Gerhard Hummer: Artificial reaction coordinate "tunneling" in free-energy calculations: The catalytic reaction of RNase H. Journal of Computational Chemistry 30(11): 1634-1641 (2009) | |
| 2007 | ||
| 7 | Xiongwu Wu, Bernard R. Brooks: Modeling Of Macromolecular Assemblies with Map Objects. BIOCOMP 2007: 411-420 | |
| 6 | H. Lee Woodcock III, Milan Hodoscek, Andrew T. B. Gilbert, Peter M. W. Gill, Henry F. Schaefer III, Bernard R. Brooks: Interfacing Q-Chem and CHARMM to perform QM/MM reaction path calculations. Journal of Computational Chemistry 28(9): 1485-1502 (2007) | |
| 2004 | ||
| 5 | Xiongwu Wu, Yidong Chen, Bernard R. Brooks, Yan A. Su: The Local Maximum Clustering Method and Its Application in Microarray Gene Expression Data Analysis. EURASIP J. Adv. Sig. Proc. 2004(1): 53-63 (2004) | |
| 2003 | ||
| 4 | Robert J. Petrella, Ioan Andricioaei, Bernard R. Brooks, Martin Karplus: An improved method for nonbonded list generation: Rapid determination of near-neighbor pairs. Journal of Computational Chemistry 24(2): 222-231 (2003) | |
| 1995 | ||
| 3 | Bernard R. Brooks, Dusanka Janezic, Martin Karplus: Harmonic Analysis of Large Systems. I. Methodology. Journal of Computational Chemistry 16(12): 1522-1542 (1995) | |
| 1994 | ||
| 2 | Philippe Derreumaux, Guhua Zhang, Tamar Schlick, Bernard R. Brooks: A Truncated Newton Minimizer Adapted for CHARMM and Biomolecular Applications. Journal of Computational Chemistry 15(5): 532-552 (1994) | |
| 1 | Peter J. Steinbach, Bernard R. Brooks: New Spherical-Cutoff Methods for Long-Range Forces in Macromolecular Simulation. Journal of Computational Chemistry 15(7): 667-683 (1994) | |
Colors in the list of coauthors
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