 | 2011 |
| 26 |  | Ritwik Layek,
Aniruddha Datta,
Michael L. Bittner,
Edward R. Dougherty:
Combination therapy design for cancer: A digital systems approach.
CDC-ECE 2011: 4377-4382 |
| 25 |  | Ritwik Layek,
Aniruddha Datta,
Michael L. Bittner,
Edward R. Dougherty:
Cancer therapy design based on pathway logic.
Bioinformatics 27(4): 548-555 (2011) |
| 2010 |
| 24 |  | Blaise Hanczar,
Jianping Hua,
Chao Sima,
John N. Weinstein,
Michael L. Bittner,
Edward R. Dougherty:
Small-sample precision of ROC-related estimates.
Bioinformatics 26(6): 822-830 (2010) |
| 23 |  | Edward R. Dougherty,
Ranadip Pal,
Xiaoning Qian,
Michael L. Bittner,
Aniruddha Datta:
Stationary and structural control in gene regulatory networks: basic concepts.
Int. J. Systems Science 41(1): 5-16 (2010) |
| 2009 |
| 22 |  | Ina Sen,
Michael P. Verdicchio,
Sungwon Jung,
Robert Trevino,
Michael L. Bittner:
Context-Specific Gene Regulations in Cancer Gene Expression Data.
Pacific Symposium on Biocomputing 2009: 75-86 |
| 21 |  | Edward R. Dougherty,
Marcel Brun,
Jeffrey M. Trent,
Michael L. Bittner:
Conditioning-Based Modeling of Contextual Genomic Regulation.
IEEE/ACM Trans. Comput. Biology Bioinform. 6(2): 310-320 (2009) |
| 20 |  | Qian Xu,
Jianping Hua,
Zixiang Xiong,
Michael L. Bittner,
Edward R. Dougherty:
The effect of microarray image compression on expression-based classification.
Signal, Image and Video Processing 3(1): 53-61 (2009) |
| 2007 |
| 19 |  | Nestor Walter Trepode,
Hugo Aguirre Armelin,
Michael L. Bittner,
Junior Barrera,
Marco Dimas Gubitoso,
Ronaldo Fumio Hashimoto:
A Robust Structural PGN Model for Control of Cell-Cycle Progression Stabilized by Negative Feedbacks.
EURASIP J. Bioinformatics and Systems Biology 2007: (2007) |
| 2006 |
| 18 |  | Ashish Choudhary,
Aniruddha Datta,
Michael L. Bittner,
Edward R. Dougherty:
Intervention in a family of Boolean networks.
Bioinformatics 22(2): 226-232 (2006) |
| 17 |  | Jianping Hua,
Yoganand Balagurunathan,
Yidong Chen,
James Lowey,
Michael L. Bittner,
Zixiang Xiong,
Edward Suh,
Edward R. Dougherty:
Normalization Benefits Microarray-Based Classification.
EURASIP J. Bioinformatics and Systems Biology 2006: (2006) |
| 2005 |
| 16 |  | Prabhdeep Singh,
R. Bhimavarapu,
Hasan Davulcu,
Chitta Baral,
Seungchan Kim,
Huan Liu,
Michael L. Bittner,
I. V. Ramakrishnan:
BioLog: A Browser Based Collaboration and Resource Navigation Assistant for BioMedical Researchers.
DILS 2005: 19-30 |
| 15 |  | Ranadip Pal,
Ivan Ivanov,
Aniruddha Datta,
Michael L. Bittner,
Edward R. Dougherty:
Generating Boolean networks with a prescribed attractor structure.
Bioinformatics 21(21): 4021-4025 (2005) |
| 14 |  | Ranadip Pal,
Aniruddha Datta,
Michael L. Bittner,
Edward R. Dougherty:
Intervention in context-sensitive probabilistic Boolean networks.
Bioinformatics 21(7): 1211-1218 (2005) |
| 13 |  | Ranadip Pal,
Aniruddha Datta,
Albert J. Fornace,
Michael L. Bittner,
Edward R. Dougherty:
Boolean relationships among genes responsive to ionizing radiation in the NCI 60 ACDS.
Bioinformatics 21(8): 1542-1549 (2005) |
| 2004 |
| 12 |  | Sanju Attoor,
Edward R. Dougherty,
Yidong Chen,
Michael L. Bittner,
Jeffrey M. Trent:
Which is better for cDNA-microarray-based classification: ratios or direct intensities.
Bioinformatics 20(16): 2513-2520 (2004) |
| 11 |  | Xiaobo Zhou,
Xiaodong Wang,
Ranadip Pal,
Ivan Ivanov,
Michael L. Bittner,
Edward R. Dougherty:
A Bayesian connectivity-based approach to constructing probabilistic gene regulatory networks.
Bioinformatics 20(17): 2918-2927 (2004) |
| 10 |  | Aniruddha Datta,
Ashish Choudhary,
Michael L. Bittner,
Edward R. Dougherty:
External control in Markovian genetic regulatory networks: the imperfect information case.
Bioinformatics 20(6): 924-930 (2004) |
| 9 |  | Ronaldo Fumio Hashimoto,
Seungchan Kim,
Ilya Shmulevich,
Wei Zhang,
Michael L. Bittner,
Edward R. Dougherty:
Growing genetic regulatory networks from seed genes.
Bioinformatics 20(8): 1241-1247 (2004) |
| 8 |  | Edward R. Dougherty,
Ilya Shmulevich,
Michael L. Bittner:
Genomic Signal Processing: The Salient Issues.
EURASIP J. Adv. Sig. Proc. 2004(1): 146-153 (2004) |
| 2003 |
| 7 |  | Aniruddha Datta,
Ashish Choudhary,
Michael L. Bittner,
Edward R. Dougherty:
External Control in Markovian Genetic Regulatory Networks.
Machine Learning 52(1-2): 169-191 (2003) |
| 6 |  | Ronaldo Fumio Hashimoto,
Edward R. Dougherty,
Marcel Brun,
Zheng-Zheng Zhou,
Michael L. Bittner,
Jeffrey M. Trent:
Efficient selection of feature sets possessing high coefficients of determination based on incremental determinations.
Signal Processing 83(4): 695-712 (2003) |
| 2002 |
| 5 |  | Mattias Wahde,
Gregory T. Klus,
Michael L. Bittner,
Yidong Chen,
Zoltan Szallasi:
Assessing the significance of consistently mis-regulated genes in cancer associated gene expression matrices.
Bioinformatics 18(3): 389-394 (2002) |
| 4 |  | Yidong Chen,
Vishnu G. Kamat,
Edward R. Dougherty,
Michael L. Bittner,
Paul S. Meltzer,
Jeffrey M. Trent:
Ratio statistics of gene expression levels and applications to microarray data analysis.
Bioinformatics 18(9): 1207-1215 (2002) |
| 3 |  | Edward R. Dougherty,
Junior Barrera,
Marcel Brun,
Seungchan Kim,
Roberto Marcondes Cesar Junior,
Yidong Chen,
Michael L. Bittner,
Jeffrey M. Trent:
Inference from Clustering with Application to Gene-Expression Microarrays.
Journal of Computational Biology 9(1): 105-126 (2002) |
| 2 |  | Seungchan Kim,
Edward R. Dougherty,
Junior Barrera,
Yidong Chen,
Michael L. Bittner,
Jeffrey M. Trent:
Strong Feature Sets from Small Samples.
Journal of Computational Biology 9(1): 127-146 (2002) |
| 1999 |
| 1 |  | Edward R. Dougherty,
Michael L. Bittner,
Yidong Chen,
Seungchan Kim,
Krishnamoorthy Sivakumar,
Junior Barrera,
Paul S. Meltzer,
Jeffrey M. Trent:
Nonlinear filters in genomic control.
NSIP 1999: 10-14 |