David A. Bader

	2011
112		David Ediger, Jason Riedy, David A. Bader, Henning Meyerhenke: Tracking Structure of Streaming Social Networks. IPDPS Workshops 2011: 1691-1699
111		Ananth Kalyanaraman, Srinivas Aluru, David A. Bader: HiCOMB Introduction. IPDPS Workshops 2011: 426-427
110		Wenjie Liu, Zhihui Du, Yu Xiao, David A. Bader, Chen Xu: A Waterfall Model to Achieve Energy Efficient Tasks Mapping for Large Scale GPU Clusters. IPDPS Workshops 2011: 82-92
109		David A. Bader, Guojing Cong: Spanning Tree, Minimum Weight. Encyclopedia of Parallel Computing 2011: 1870-1877
108		David A. Bader, Guojing Cong: SWARM: A Parallel Programming Framework for Multicore Processors. Encyclopedia of Parallel Computing 2011: 1966-1971
107		David A. Bader, Guojing Cong: Graph Algorithms. Encyclopedia of Parallel Computing 2011: 796-805
106		Guojing Cong, David A. Bader: Hybrid Programming With SIMPLE. Encyclopedia of Parallel Computing 2011: 851-860
105		Mingyu Chen, David A. Bader, Seunghwa Kang: On the random access performance of Cell Broadband Engine with graph analysis application CoRR abs/1105.5881: (2011)
104		David A. Bader, David R. Kaeli, Volodymyr V. Kindratenko: Guest Editor's Introduction: Special Issue on High-Performance Computing with Accelerators. IEEE Trans. Parallel Distrib. Syst. 22(1): 3-6 (2011)
103		Seunghwa Kang, David Ediger, David A. Bader: Algorithm Engineering Challenges in Multicore and Manycore Systems. it - Information Technology 53(6): 266-273 (2011)
	2010
102		David A. Bader: Analyzing Massive Social Networks Using Multicore and Multithreaded Architectures. Facing the Multicore-Challenge 2010: 1
101		David Ediger, Karl Jiang, Jason Riedy, David A. Bader, Courtney Corley, Robert M. Farber, William N. Reynolds: Massive Social Network Analysis: Mining Twitter for Social Good. ICPP 2010: 583-593
100		David A. Bader: Message from general chair. IPDPS 2010: 1-2
99		George Karypis, Srinivas Aluru, David A. Bader: Message from the workshop chairs. IPDPS Workshops 2010: 1-2
98		Zhihui Du, Zhaoming Yin, David A. Bader: A tile-based parallel Viterbi algorithm for biological sequence alignment on GPU with CUDA. IPDPS Workshops 2010: 1-8
97		Seunghwa Kang, David A. Bader: Large scale complex network analysis using the hybrid combination of a MapReduce cluster and a highly multithreaded system. IPDPS Workshops 2010: 1-8
96		David Ediger, Karl Jiang, Jason Riedy, David A. Bader: Massive streaming data analytics: A case study with clustering coefficients. IPDPS Workshops 2010: 1-8
95		Vipin Sachdeva, Michael Kistler, David A. Bader: Evaluating Cell/B.E software cache for ClustalW. ISCAS 2010: 3793-3796
94		Virat Agarwal, Fabrizio Petrini, Davide Pasetto, David A. Bader: Scalable Graph Exploration on Multicore Processors. SC 2010: 1-11
	2009
93		Rick Quax, David A. Bader, Peter M. A. Sloot: Simulating Individual-Based Models of Epidemics in Hierarchical Networks. ICCS (1) 2009: 725-734
92		Song Hao, Zhihui Du, David A. Bader, Yin Ye: A Partition-Merge Based Cache-Conscious Parallel Sorting Algorithm for CMP with Shared Cache. ICPP 2009: 396-403
91		Karl Jiang, David Ediger, David A. Bader: Generalizing k-Betweenness Centrality Using Short Paths and a Parallel Multithreaded Implementation. ICPP 2009: 542-549
90		Kamesh Madduri, David A. Bader: Compact graph representations and parallel connectivity algorithms for massive dynamic network analysis. IPDPS 2009: 1-11
89		Seunghwa Kang, David A. Bader, Richard W. Vuduc: Understanding the design trade-offs among current multicore systems for numerical computations. IPDPS 2009: 1-12
88		Kamesh Madduri, David Ediger, Karl Jiang, David A. Bader, Daniel G. Chavarría-Miranda: A faster parallel algorithm and efficient multithreaded implementations for evaluating betweenness centrality on massive datasets. IPDPS 2009: 1-8
87		Seunghwa Kang, David A. Bader: An efficient transactional memory algorithm for computing minimum spanning forest of sparse graphs. PPOPP 2009: 15-24
86		Amrita Mathuriya, David A. Bader, Christine E. Heitsch, Stephen C. Harvey: GTfold: a scalable multicore code for RNA secondary structure prediction. SAC 2009: 981-988
85		Virat Agarwal, David A. Bader, Lin Dan, Lurng-Kuo Liu, Davide Pasetto, Michael Perrone, Fabrizio Petrini: Faster FAST: multicore acceleration of streaming financial data. Computer Science - R&D 23(3-4): 249-257 (2009)
84		David A. Bader, Virat Agarwal, Seunghwa Kang: Computing discrete transforms on the Cell Broadband Engine. Parallel Computing 35(3): 119-137 (2009)
	2008
83		David A. Bader: Petascale Computing for Large-Scale Graph Problems. CISIS 2008: 779
82		Song Hao, Zhihui Du, David A. Bader, Man Wang: A Prediction Based CMP Cache Migration Policy. HPCC 2008: 374-381
81		David A. Bader, Aparna Chandramowlishwaran, Virat Agarwal: On the Design of Fast Pseudo-Random Number Generators for the Cell Broadband Engine and an Application to Risk Analysis. ICPP 2008: 520-527
80		Seunghwa Kang, David A. Bader: Optimizing JPEG2000 Still Image Encoding on the Cell Broadband Engine. ICPP 2008: 83-90
79		David A. Bader, Sulabh Patel: High performance MPEG-2 software decoder on the cell broadband engine. IPDPS 2008: 1-10
78		Virat Agarwal, Lurng-Kuo Liu, David A. Bader: Financial modeling on the cell broadband engine. IPDPS 2008: 1-12
77		David A. Bader, Kamesh Madduri: SNAP, Small-world Network Analysis and Partitioning: An open-source parallel graph framework for the exploration of large-scale networks. IPDPS 2008: 1-12
76		David A. Bader, Viktor K. Prasanna: DOSA: design optimizer for scientific applications. IPDPS 2008: 1-5
75		David A. Bader: Engineering Algorithms for Computational Biology. Encyclopedia of Algorithms 2008
74		David A. Bader: High Performance Algorithm Engineering for Large-scale Problems. Encyclopedia of Algorithms 2008
73		David A. Bader: Sorting Signed Permutations by Reversal (Reversal Distance). Encyclopedia of Algorithms 2008
72		David A. Bader, Srinivas Aluru: High-performance computational biology. Parallel Computing 34(11): 613-615 (2008)
71		David A. Bader, Kamesh Madduri: A graph-theoretic analysis of the human protein-interaction network using multicore parallel algorithms. Parallel Computing 34(11): 627-639 (2008)
	2007
70		Kamesh Madduri, David A. Bader, Jonathan W. Berry, Joseph R. Crobak: An Experimental Study of A Parallel Shortest Path Algorithm for Solving Large-Scale Graph Instances. ALENEX 2007
69		David A. Bader, Virat Agarwal: FFTC: Fastest Fourier Transform for the IBM Cell Broadband Engine. HiPC 2007: 172-184
68		David A. Bader: Petascale Computing for Large-Scale Graph Problems. IPDPS 2007: 1
67		David A. Bader, Virat Agarwal, Kamesh Madduri: On the Design and Analysis of Irregular Algorithms on the Cell Processor: A Case Study of List Ranking. IPDPS 2007: 1-10
66		David A. Bader, Viktor K. Prasanna: DOSA: Design Optimizer for Scientific Applications. IPDPS 2007: 1-6
65		David A. Bader, Kamesh Madduri: A Graph-Theoretic Analysis of the Human Protein-Interaction Network Using Multicore Parallel Algorithms. IPDPS 2007: 1-8
64		Joseph R. Crobak, Jonathan W. Berry, Kamesh Madduri, David A. Bader: Advanced Shortest Paths Algorithms on a Massively-Multithreaded Architecture. IPDPS 2007: 1-8
63		David A. Bader, Varun Kanade, Kamesh Madduri: SWARM: A Parallel Programming Framework for Multicore Processors. IPDPS 2007: 1-8
62		Srinivas Aluru, David A. Bader, Anantharaman Kalyanaraman: Symposium Evening Tutorial: High-performance Computing Methods for Computational Genomics. IPDPS 2007: 13
61		Guojing Cong, David A. Bader: Techniques for Designing Efficient Parallel Graph Algorithms for SMPs and Multicore Processors. ISPA 2007: 137-147
60		David A. Bader: Petascale Computing for Large-Scale Graph Problems. PPAM 2007: 166-169
59		David A. Bader, Shiva Kintali, Kamesh Madduri, Milena Mihail: Approximating Betweenness Centrality. WAW 2007: 124-137
58		Sagar Dhakal, Majeed M. Hayat, Jorge E. Pezoa, Cundong Yang, David A. Bader: Dynamic Load Balancing in Distributed Systems in the Presence of Delays: A Regeneration-Theory Approach. IEEE Trans. Parallel Distrib. Syst. 18(4): 485-497 (2007)
57		Diana H. P. Low, Bharadwaj Veeravalli, David A. Bader: On the design of high-performance algorithms for aligning multiple protein sequences on mesh-based multiprocessor architectures. J. Parallel Distrib. Comput. 67(9): 1007-1017 (2007)
56		David A. Bader, Virat Agarwal, Kamesh Madduri, Seunghwa Kang: High performance combinatorial algorithm design on the Cell Broadband Engine processor. Parallel Computing 33(10-11): 720-740 (2007)
	2006
55		David A. Bader, Kamesh Madduri: Designing Multithreaded Algorithms for Breadth-First Search and st-connectivity on the Cray MTA-2. ICPP 2006: 523-530
54		David A. Bader, Kamesh Madduri: Parallel Algorithms for Evaluating Centrality Indices in Real-world Networks. ICPP 2006: 539-550
53		David A. Bader, Vaddadi P. Chandu, Mi Yan: ExactMP: An Efficient Parallel Exact Solver for Phylogenetic Tree Reconstruction Using Maximum Parsimony. ICPP 2006: 65-73
52		Matthew J. Sottile, Vaddadi P. Chandu, David A. Bader: Performance analysis of parallel programs via message-passing graph traversal. IPDPS 2006
51		Srinivas Aluru, David A. Bader, Anantharaman Kalyanaraman: M11 - High-performance computing methods for computational genomics. SC 2006: 225
50		David A. Bader, Usman Roshan, Alexandros Stamatakis: Computational Grand Challenges in Assembling the Tree of Life: Problems and Solutions. Advances in Computers 68: 128-179 (2006)
49		Srinivas Aluru, Nancy M. Amato, David A. Bader: Editorial: Special Section on High-Performance Computational Biology. IEEE Trans. Parallel Distrib. Syst. 17(8): 737-739 (2006)
48		David A. Bader, Guojing Cong: Fast shared-memory algorithms for computing the minimum spanning forest of sparse graphs. J. Parallel Distrib. Comput. 66(11): 1366-1378 (2006)
47		Guojing Cong, David A. Bader: Designing irregular parallel algorithms with mutual exclusion and lock-free protocols. J. Parallel Distrib. Comput. 66(6): 854-866 (2006)
	2005
46		David A. Bader, Manish Parashar, Sridhar Varadarajan, Viktor K. Prasanna: High Performance Computing - HiPC 2005, 12th International Conference, Goa, India, December 18-21, 2005, Proceedings Springer 2005
45		David A. Bader, Vipin Sachdeva: Incorporating life sciences applications in the architectural optimizations of next-generation petaflop-system. CSB Workshops 2005: 83-84
44		David A. Bader, Kamesh Madduri: Design and Implementation of the HPCS Graph Analysis Benchmark on Symmetric Multiprocessors. HiPC 2005: 465-476
43		David A. Bader, Guojing Cong, John Feo: On the Architectural Requirements for Efficient Execution of Graph Algorithms. ICPP 2005: 547-556
42		Guojing Cong, David A. Bader: An Experimental Study of Parallel Biconnected Components Algorithms on Symmetric Multiprocessors (SMPs). IPDPS 2005
41		Guojing Cong, David A. Bader: An Empirical Analysis of Parallel Random Permutation Algorithms ON SMPs. ISCA PDCS 2005: 27-34
40		David A. Bader, Vipin Sachdeva: A Cache-Aware Parallel Implementation of the Push-Relabel Network Flow Algorithm and Experimental Evaluation of the Gap Relabeling Heuristic. ISCA PDCS 2005: 41-48
39		David A. Bader: High-Performance Algorithm Engineering for Large-Scale Graph Problems and Computational Biology. WEA 2005: 16-21
38		David A. Bader, Guojing Cong: A fast, parallel spanning tree algorithm for symmetric multiprocessors (SMPs). J. Parallel Distrib. Comput. 65(9): 994-1006 (2005)
	2004
37		David A. Bader, Ashfaq A. Khokhar: Proceedings of the ISCA 17th International Conference on Parallel and Distributed Computing Systems, September 15-17, 2004, The Canterbury Hotel, San Francisco, California, USA ISCA 2004
36		Mohammed Javeed Zaki, David A. Bader, Johan Montagnat, Concettina Guerra: Topic 17: High Performance Bioinformatics. Euro-Par 2004: 988
35		David A. Bader, Kamesh Madduri: A Parallel State Assignment Algorithm for Finite State Machines. HiPC 2004: 297-308
34		Guojing Cong, David A. Bader: Lock-Free Parallel Algorithms: An Experimental Study. HiPC 2004: 516-528
33		Mehmet F. Su, Ihab El-Kady, David A. Bader, Shawn-Yu Lin: A Novel FDTD Application Featuring OpenMP-MPI Hybrid Parallelization. ICPP 2004: 373-379
32		Guojing Cong, David A. Bader: The Euler Tour Technique and Parallel Rooted Spanning Tree. ICPP 2004: 448-457
31		David A. Bader, Guojing Cong: A Fast, Parallel Spanning Tree Algorithm for Symmetric Multiprocessors. IPDPS 2004
30		David A. Bader, Guojing Cong: Fast Shared-Memory Algorithms for Computing the Minimum Spanning Forest of Sparse Graphs. IPDPS 2004
29		David A. Bader: Computational biology and high-performance computing. Commun. ACM 47(11): 34-41 (2004)
28		David A. Bader, Srinivas Aluru: Special Issue: High Performance Computational Biology. Concurrency - Practice and Experience 16(9): 817-821 (2004)
27		Marc Snir, David A. Bader: A Framework for Measuring Supercomputer Productivity. IJHPCA 18(4): 417-432 (2004)
26		David A. Bader: An improved, randomized algorithm for parallel selection with an experimental study. J. Parallel Distrib. Comput. 64(9): 1051-1059 (2004)
	2003
25		Srinivas Aluru, David A. Bader: Guest Editor's Introduction: Special issue on high-performance computational biology. J. Parallel Distrib. Comput. 63(7-8): 671-673 (2003)
	2002
24		David A. Bader, Sukanya Sreshta, Nina R. Weisse-Bernstein: Evaluating Arithmetic Expressions Using Tree Contraction: A Fast and Scalable Parallel Implementation for Symmetric Multiprocessors (SMPs) (Extended Abstract). HiPC 2002: 63-78
23		David A. Bader, Srinivas Aluru: Workshop Introduction. IPDPS 2002
22		Bernard M. E. Moret, David A. Bader, Tandy Warnow: High-Performance Algorithm Engineering for Computational Phylogenetics. The Journal of Supercomputing 22(1): 99-111 (2002)
	2001
21		David A. Bader, Ajith K. Illendula, Bernard M. E. Moret, Nina R. Weisse-Bernstein: Using PRAM Algorithms on a Uniform-Memory-Access Shared-Memory Architecture. Algorithm Engineering 2001: 129-144
20		Bernard M. E. Moret, David A. Bader, Tandy Warnow: High-Performance Algorithm Engineering for Computational Phylogenetics. International Conference on Computational Science (2) 2001: 1012-1021
19		Bernard M. E. Moret, Stacia K. Wyman, David A. Bader, Tandy Warnow, Mi Yan: A New Implmentation and Detailed Study of Breakpoint Analysis. Pacific Symposium on Biocomputing 2001: 583-594
18		David A. Bader, Bernard M. E. Moret, Mi Yan: A Linear-Time Algorithm for Computing Inversion Distance between Signed Permutations with an Experimental Study. WADS 2001: 365-376
17		David A. Bader, Rob Pennington: Applications. IJHPCA 15(2): 181-185 (2001)
16		David A. Bader, Bernard M. E. Moret, Mi Yan: A Linear-Time Algorithm for Computing Inversion Distance between Signed Permutations with an Experimental Study. Journal of Computational Biology 8(5): 483-491 (2001)
	2000
15		Rob Pennington, David A. Bader, Barney Maccabe, Patricia A. Kovatch, Stephen L. Scott: Tutorial A: Design and Analysis of High Performance Clusters. CLUSTER 2000: 1-2
14		David A. Bader, Bernard M. E. Moret, Peter Sanders: Algorithm Engineering for Parallel Computation. Experimental Algorithmics 2000: 1-23
	1999
13		David A. Bader, Arthur B. Maccabe, Jason R. Mastaler, John K. McIver III, Patricia A. Kovatch: Design and Analysis of the Alliance/University of New Mexico Roadrunner Linux SMP SuperCluster. IWCC 1999: 9-18
12		David A. Bader, Joseph JáJá: SIMPLE: A Methodology for Programming High Performance Algorithms on Clusters of Symmetric Multiprocessors (SMPs). J. Parallel Distrib. Comput. 58(1): 92-108 (1999)
11		David A. Bader: A New, Architectural Paradigm for High-performance Computing. Scalable Computing: Practice and Experience 2(2): (1999)
	1998
10		David R. Helman, Joseph JáJá, David A. Bader: A New Deterministic Parallel Sorting Algorithm with an Experimental Evaluation. ACM Journal of Experimental Algorithmics 3: 4 (1998)
9		David R. Helman, David A. Bader, Joseph JáJá: A Randomized Parallel Sorting Algorithm with an Experimental Study. J. Parallel Distrib. Comput. 52(1): 1-23 (1998)
	1996
8		David A. Bader, Joseph JáJá: Practical Parallel Algorithms for Dynamic Data Redistribution, Median Finding, and Selection. IPPS 1996: 292-301
7		David A. Bader, Joseph JáJá, David Harwood, Larry S. Davis: Parallel Algorithms for Image Enhancement and Segmentation by Region Growing with an Experimental Study. IPPS 1996: 414-423
6		David R. Helman, David A. Bader, Joseph JáJá: Parallel Algorithms for Personalized Communication and Sorting with an Experimental Study (Extended Abstract). SPAA 1996: 211-222
5		David A. Bader, David R. Helman, Joseph JáJá: Practical Parallel Algorithms for Personalized Communication and Integer Sorting. ACM Journal of Experimental Algorithmics 1: 3 (1996)
4		David A. Bader, Joseph JáJá: Parallel Algorithms for Image Histogramming and Connected Components with an Experimental Study. J. Parallel Distrib. Comput. 35(2): 173-190 (1996)
3		David A. Bader, Joseph JáJá, David Harwood, Larry S. Davis: Parallel algorithms for image enhancement and segmentation by region growing, with an experimental study. The Journal of Supercomputing 10(2): 141-168 (1996)
	1995
2		David A. Bader, Joseph JáJá: Parallel Algorithms for Image Histogramming and Connected Components with an Experimental Study (Extended Abstract). PPOPP 1995: 123-133
1		David A. Bader, Joseph JáJá, Rama Chellappa: Scalable data parallel algorithms for texture synthesis using Gibbs random fields. IEEE Transactions on Image Processing 4(10): 1456-1460 (1995)

Coauthor Index

1	Virat Agarwal	[56] [67] [69] [78] [81] [84] [85] [94]
2	Srinivas Aluru	[23] [25] [28] [49] [51] [62] [72] [99] [111]
3	Nancy M. Amato	[49]
4	Jonathan W. Berry	[64] [70]
5	Aparna Chandramowlishwaran	[81]
6	Vaddadi P. Chandu	[52] [53]
7	Daniel G. Chavarría-Miranda	[88]
8	Rama Chellappa	[1]
9	Mingyu Chen	[105]
10	Guojing Cong	[30] [31] [32] [34] [38] [41] [42] [43] [47] [48] [61] [106] [107] [108] [109]
11	Courtney Corley (Courtney D. Corley)	[101]
12	Joseph R. Crobak	[64] [70]
13	Lin Dan	[85]
14	Larry S. Davis	[3] [7]
15	Sagar Dhakal	[58]
16	Zhihui Du	[82] [92] [98] [110]
17	David Ediger	[88] [91] [96] [101] [103] [112]
18	Ihab El-Kady	[33]
19	Robert M. Farber	[101]
20	John Feo	[43]
21	Concettina Guerra	[36]
22	Song Hao	[82] [92]
23	Stephen C. Harvey	[86]
24	David Harwood	[3] [7]
25	Majeed M. Hayat	[58]
26	Christine E. Heitsch	[86]
27	David R. Helman	[5] [6] [9] [10]
28	Ajith K. Illendula	[21]
29	Joseph JáJá	[1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [12]
30	Karl Jiang	[88] [91] [96] [101]
31	David R. Kaeli	[104]
32	Anantharaman Kalyanaraman (Ananth Kalyanaraman)	[51] [62] [111]
33	Varun Kanade	[63]
34	Seunghwa Kang	[56] [80] [84] [87] [89] [97] [103] [105]
35	George Karypis	[99]
36	Ashfaq A. Khokhar	[37]
37	Volodymyr V. Kindratenko	[104]
38	Shiva Kintali (Shiva Prasad Kintali)	[59]
39	Michael Kistler	[95]
40	Patricia A. Kovatch	[13] [15]
41	Shawn-Yu Lin	[33]
42	Lurng-Kuo Liu	[78] [85]
43	Wenjie Liu	[110]
44	Diana H. P. Low	[57]
45	Arthur B. Maccabe	[13]
46	Barney Maccabe	[15]
47	Kamesh Madduri	[35] [44] [54] [55] [56] [59] [63] [64] [65] [67] [70] [71] [77] [88] [90]
48	Jason R. Mastaler	[13]
49	Amrita Mathuriya	[86]
50	John K. McIver III	[13]
51	Henning Meyerhenke	[112]
52	Milena Mihail	[59]
53	Johan Montagnat	[36]
54	Bernard M. E. Moret	[14] [16] [18] [19] [20] [21] [22]
55	Manish Parashar	[46]
56	Davide Pasetto	[85] [94]
57	Sulabh Patel	[79]
58	Rob Pennington	[15] [17]
59	Michael Perrone	[85]
60	Fabrizio Petrini	[85] [94]
61	Jorge E. Pezoa	[58]
62	Viktor K. Prasanna (V. K. Prasanna Kumar)	[46] [66] [76]
63	Rick Quax	[93]
64	William N. Reynolds	[101]
65	Jason Riedy	[96] [101] [112]
66	Usman Roshan	[50]
67	Vipin Sachdeva	[40] [45] [95]
68	Peter Sanders	[14]
69	Stephen L. Scott	[15]
70	Peter M. A. Sloot	[93]
71	Marc Snir	[27]
72	Matthew J. Sottile	[52]
73	Sukanya Sreshta	[24]
74	Alexandros Stamatakis	[50]
75	Mehmet F. Su	[33]
76	Sridhar Varadarajan	[46]
77	Bharadwaj Veeravalli	[57]
78	Richard W. Vuduc (Rich Vuduc)	[89]
79	Man Wang	[82]
80	Tandy Warnow	[19] [20] [22]
81	Nina R. Weisse-Bernstein	[21] [24]
82	Stacia K. Wyman	[19]
83	Yu Xiao	[110]
84	Chen Xu	[110]
85	Mi Yan	[16] [18] [19] [53]
86	Cundong Yang	[58]
87	Yin Ye	[92]
88	Zhaoming Yin	[98]
89	Mohammed Javeed Zaki (Mohammed J. Zaki)	[36]

Colors in the list of coauthors

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