Sebastian Böcker

	2012
58		Imran Rauf, Florian Rasche, François Nicolas, Sebastian Böcker: Finding Maximum Colorful Subtrees in Practice. RECOMB 2012: 213-223
57		Sebastian Böcker, Quang Bao Anh Bui, Anke Truß: Improved Fixed-Parameter Algorithms for Minimum-Flip Consensus Trees. ACM Transactions on Algorithms 8(1): 7 (2012)
56		Sebastian Böcker, Peter Damaschke: A note on the parameterized complexity of unordered maximum tree orientation. Discrete Applied Mathematics 160(10-11): 1634-1638 (2012)
	2011
55		Markus Chimani, Matthias Woste, Sebastian Böcker: A Closer Look at the Closest String and Closest Substring Problem. ALENEX 2011: 13-24
54		Malte Brinkmeyer, Thasso Griebel, Sebastian Böcker: FlipCut Supertrees: Towards Matrix Representation Accuracy in Polynomial Time. COCOON 2011: 37-48
53		Sebastian Böcker: A Golden Ratio Parameterized Algorithm for Cluster Editing. IWOCA 2011: 85-95
52		Kerstin Scheubert, Franziska Hufsky, Florian Rasche, Sebastian Böcker: Computing Fragmentation Trees from Metabolite Multiple Mass Spectrometry Data. RECOMB 2011: 377-391
51		Malte Brinkmeyer, Thasso Griebel, Sebastian Böcker: Polynomial Supertree Methods Revisited. Adv. Bioinformatics 2011: (2011)
50		Sebastian Böcker, Sebastian Briesemeister, Gunnar W. Klau: Exact Algorithms for Cluster Editing: Evaluation and Experiments. Algorithmica 60(2): 316-334 (2011)
49		Franziska Hufsky, Léon Kuchenbecker, Katharina Jahn, Jens Stoye, Sebastian Böcker: Swiftly Computing Center Strings. BMC Bioinformatics 12: 106 (2011)
48		Anna Katharina Dehof, Alexander Rurainski, Quang Bao Anh Bui, Sebastian Böcker, Hans-Peter Lenhof, Andreas Hildebrandt: Automated bond order assignment as an optimization problem. Bioinformatics 27(5): 619-625 (2011)
47		Sebastian Böcker: Towards a Data Reduction for the Minimum Flip Supertree Problem CoRR abs/1104.4471: (2011)
46		Sebastian Böcker, Quang Bao Anh Bui, François Nicolas, Anke Truß: Intractability of the Minimum-Flip Supertree problem and its variants CoRR abs/1112.4536: (2011)
45		Sebastian Böcker, Birte Kehr, Florian Rasche: Determination of Glycan Structure from Tandem Mass Spectra. IEEE/ACM Trans. Comput. Biology Bioinform. 8(4): 976-986 (2011)
44		Sebastian Böcker, Peter Damaschke: Even faster parameterized cluster deletion and cluster editing. Inf. Process. Lett. 111(14): 717-721 (2011)
43		Tobias Wittkop, Sven Rahmann, Richard Röttger, Sebastian Böcker, Jan Baumbach: Extension and Robustness of Transitivity Clustering for Protein-Protein Interaction Network Analysis. Internet Mathematics 7(4): 255-273 (2011)
42		Sebastian Böcker, Quang Bao Anh Bui, Anke Truß: Computing bond orders in molecule graphs. Theor. Comput. Sci. 412(12-14): 1184-1195 (2011)
	2010
41		Markus Chimani, Sven Rahmann, Sebastian Böcker: Exact ILP solutions for phylogenetic minimum flip problems. BCB 2010: 147-153
40		Malte Brinkmeyer, Thasso Griebel, Sebastian Böcker: Polynomial Supertree Methods Revisited. PRIB 2010: 183-194
39		Franziska Hufsky, Léon Kuchenbecker, Katharina Jahn, Jens Stoye, Sebastian Böcker: Swiftly Computing Center Strings. WABI 2010: 325-336
	2009
38		Sebastian Böcker, Birte Kehr, Florian Rasche: Determination of Glycan Structure from Tandem Mass Spectra. COCOON 2009: 258-267
37		Sebastian Böcker, Anton Pervukhin: Inferring Peptide Composition from Molecular Formulas. COCOON 2009: 277-286
36		Sebastian Böcker, Quang Bao Anh Bui, Patrick Seeber, Anke Truß: Computing Bond Types in Molecule Graphs. COCOON 2009: 297-306
35		Sebastian Böcker, Falk Hüffner, Anke Truß, Magnus Wahlström: A Faster Fixed-Parameter Approach to Drawing Binary Tanglegrams. IWPEC 2009: 38-49
34		Sebastian Böcker, Florian Rasche, Tamara Steijger: Annotating Fragmentation Patterns. WABI 2009: 13-24
33		Sebastian Böcker, Sebastian Briesemeister, Gunnar W. Klau: On optimal comparability editing with applications to molecular diagnostics. BMC Bioinformatics 10(S-1): (2009)
32		Sebastian Böcker, Matthias C. Letzel, Zsuzsanna Lipták, Anton Pervukhin: SIRIUS: decomposing isotope patterns for metabolite identification. Bioinformatics 25(2): 218-224 (2009)
31		Sebastian Böcker, Sebastian Briesemeister, Quang Bao Anh Bui, Anke Truß: Going weighted: Parameterized algorithms for cluster editing. Theor. Comput. Sci. 410(52): 5467-5480 (2009)
	2008
30		Sebastian Böcker, Sebastian Briesemeister, Quang Bao Anh Bui, Anke Truß: A Fixed-Parameter Approach for Weighted Cluster Editing. APBC 2008: 211-220
29		Sebastian Böcker, Sebastian Briesemeister, Quang Bao Anh Bui, Anke Truß: Going Weighted: Parameterized Algorithms for Cluster Editing. COCOA 2008: 1-12
28		Sebastian Böcker, Florian Rasche: Towards de novo identification of metabolites by analyzing tandem mass spectra. ECCB 2008: 49-55
27		Alexandra Scherbart, Wiebke Timm, Sebastian Böcker, Tim W. Nattkemper: Improved Mass Spectrometry Peak Intensity Prediction by Adaptive Feature Weighting. ICONIP (1) 2008: 513-520
26		Sebastian Böcker, Quang Bao Anh Bui, Anke Truß: An Improved Fixed-Parameter Algorithm for Minimum-Flip Consensus Trees. IWPEC 2008: 43-54
25		Sebastian Böcker, Katharina Jahn, Julia Mixtacki, Jens Stoye: Computation of Median Gene Clusters. RECOMB 2008: 331-345
24		Sebastian Böcker, Sebastian Briesemeister, Gunnar W. Klau: Exact Algorithms for Cluster Editing: Evaluation and Experiments. WEA 2008: 289-302
23		Wiebke Timm, Alexandra Scherbart, Sebastian Böcker, Oliver Kohlbacher, Tim W. Nattkemper: Peak intensity prediction in MALDI-TOF mass spectrometry: A machine learning study to support quantitative proteomics. BMC Bioinformatics 9: (2008)
22		Thasso Griebel, Malte Brinkmeyer, Sebastian Böcker: EPoS: a modular software framework for phylogenetic analysis. Bioinformatics 24(20): 2399-2400 (2008)
21		Sebastian Böcker, Zsuzsanna Lipták, Marcel Martin, Anton Pervukhin, Henner Sudek: DECOMP - from interpreting Mass Spectrometry peaks to solving the Money Changing Problem. Bioinformatics 24(4): 591-593 (2008)
20		Sebastian Böcker, Veli Mäkinen: Combinatorial Approaches for Mass Spectra Recalibration. IEEE/ACM Trans. Comput. Biology Bioinform. 5(1): 91-100 (2008)
	2007
19		Alexandra Scherbart, Wiebke Timm, Sebastian Böcker, Tim W. Nattkemper: Neural Network Approach for Mass Spectrometry Prediction by Peptide Prototyping. ICANN (2) 2007: 90-99
18		Sebastian Böcker, Zsuzsanna Lipták: A Fast and Simple Algorithm for the Money Changing Problem. Algorithmica 48(4): 413-432 (2007)
17		Hans-Michael Kaltenbach, Andreas Wilke, Sebastian Böcker: SAMPI: Protein Identification with Mass Spectra Alignments. BMC Bioinformatics 8: (2007)
16		Sebastian Böcker: Simulating multiplexed SNP discovery rates using base-specific cleavage and mass spectrometry. Bioinformatics 23(2): 5-12 (2007)
15		Sebastian Böcker, Hans-Michael Kaltenbach: Mass spectra alignments and their significance. J. Discrete Algorithms 5(4): 714-728 (2007)
	2006
14		Hans-Michael Kaltenbach, Sebastian Böcker, Sven Rahmann: Markov Additive Chains and Applications to Fragment Statistics for Peptide Mass Fingerprinting. Systems Biology and Computational Proteomics 2006: 29-41
13		Sebastian Böcker, Matthias C. Letzel, Zsuzsanna Lipták, Anton Pervukhin: Decomposing Metabolomic Isotope Patterns. WABI 2006: 12-23
12		Sebastian Böcker: Sequencing from Compomers: The Puzzle. Theory Comput. Syst. 39(3): 455-471 (2006)
	2005
11		Sebastian Böcker, Zsuzsanna Lipták: The Money Changing Problem Revisited: Computing the Frobenius Number in Time O(k a1). COCOON 2005: 965-974
10		Sebastian Böcker, Hans-Michael Kaltenbach: Mass Spectra Alignments and Their Significance. CPM 2005: 429-441
9		Sebastian Böcker, Veli Mäkinen: Combinatorial Approaches for Mass Spectra Recalibration. Computational Proteomics 2005
8		Sebastian Böcker, Veli Mäkinen: Maximum line-pair stabbing problem and its variations. EuroCG 2005: 183-186
7		Sebastian Böcker, Zsuzsanna Lipták: Efficient mass decomposition. SAC 2005: 151-157
	2004
6		Sebastian Böcker: Weighted Sequencing from Compomers: DNA de-novo sequencing from mass spectrometry data in the presence of false negative constraints. German Conference on Bioinformatics 2004: 13-24
5		Sebastian Böcker: Sequencing from Compomers: Using Mass Spectrometry for DNA de novo Sequencing of 200+ nt. Journal of Computational Biology 11(6): 1110-1134 (2004)
	2003
4		Sebastian Böcker: SNP and mutation discovery using base-specific cleavage and MALDI-TOF mass spectrometry. ISMB (Supplement of Bioinformatics) 2003: 44-53
3		Sebastian Böcker: Sequencing from Compomers: Using Mass Spectrometry for DNA De-Novo Sequencing of 200+ nt. WABI 2003: 476-497
	2002
2		Sebastian Böcker: Exponentially many supertrees. Appl. Math. Lett. 15(7): 861-865 (2002)
	2000
1		Sebastian Böcker, David Bryant, Andreas W. M. Dress, Mike A. Steel: Algorithmic Aspects of Tree Amalgamation. J. Algorithms 37(2): 522-537 (2000)

Coauthor Index

1	Jan Baumbach	[43]
2	Sebastian Briesemeister	[24] [29] [30] [31] [33] [50]
3	Malte Brinkmeyer	[22] [40] [51] [54]
4	David Bryant	[1]
5	Quang Bao Anh Bui	[26] [29] [30] [31] [36] [42] [46] [48] [57]
6	Markus Chimani	[41] [55]
7	Peter Damaschke	[44] [56]
8	Anna Katharina Dehof	[48]
9	Andreas W. M. Dress	[1]
10	Thasso Griebel	[22] [40] [51] [54]
11	Andreas Hildebrandt	[48]
12	Falk Hüffner	[35]
13	Franziska Hufsky	[39] [49] [52]
14	Katharina Jahn	[25] [39] [49]
15	Hans-Michael Kaltenbach	[10] [14] [15] [17]
16	Birte Kehr	[38] [45]
17	Gunnar W. Klau	[24] [33] [50]
18	Oliver Kohlbacher	[23]
19	Léon Kuchenbecker	[39] [49]
20	Hans-Peter Lenhof	[48]
21	Matthias C. Letzel	[13] [32]
22	Zsuzsanna Lipták	[7] [11] [13] [18] [21] [32]
23	Veli Mäkinen	[8] [9] [20]
24	Marcel Martin	[21]
25	Julia Mixtacki	[25]
26	Tim W. Nattkemper (Tim Wilhelm Nattkemper)	[19] [23] [27]
27	François Nicolas	[46] [58]
28	Anton Pervukhin	[13] [21] [32] [37]
29	Sven Rahmann	[14] [41] [43]
30	Florian Rasche	[28] [34] [38] [45] [52] [58]
31	Imran Rauf	[58]
32	Richard Röttger	[43]
33	Alexander Rurainski	[48]
34	Alexandra Scherbart	[19] [23] [27]
35	Kerstin Scheubert	[52]
36	Patrick Seeber	[36]
37	Mike A. Steel (Michael Anthony Steel)	[1]
38	Tamara Steijger	[34]
39	Jens Stoye	[25] [39] [49]
40	Henner Sudek	[21]
41	Wiebke Timm	[19] [23] [27]
42	Anke Truß	[26] [29] [30] [31] [35] [36] [42] [46] [57]
43	Magnus Wahlström	[35]
44	Andreas Wilke	[17]
45	Tobias Wittkop	[43]
46	Matthias Woste	[55]

Colors in the list of coauthors

Last update Sun May 27 04:04:01 2012 CET by the DBLP Team — Data released under the ODC-BY 1.0 license — See also our legal information page