Adam P. Arkin

	2011
22		Y. Wayne Huang, Adam P. Arkin, John-Marc Chandonia: WIST: toolkit for rapid, customized LIMS development. Bioinformatics 27(3): 437-438 (2011)
21		John T. Bates, Dylan Chivian, Adam P. Arkin: GLAMM: Genome-Linked Application for Metabolic Maps. Nucleic Acids Research 39(Web-Server-Issue): 400-405 (2011)
	2010
20		Pavel S. Novichkov, Olga N. Laikova, Elena S. Novichkova, Mikhail S. Gelfand, Adam P. Arkin, Inna Dubchak, Dmitry A. Rodionov: RegPrecise: a database of curated genomic inferences of transcriptional regulatory interactions in prokaryotes. Nucleic Acids Research 38(Database-Issue): 111-118 (2010)
19		Paramvir S. Dehal, Marcin P. Joachimiak, Morgan N. Price, John T. Bates, Jason K. Baumohl, Dylan Chivian, Greg D. Friedland, Katherine H. Huang, Keith Keller, Pavel S. Novichkov, Inna Dubchak, Eric J. Alm, Adam P. Arkin: MicrobesOnline: an integrated portal for comparative and functional genomics. Nucleic Acids Research 38(Database-Issue): 396-400 (2010)
18		Pavel S. Novichkov, Dmitry A. Rodionov, Elena D. Stavrovskaya, Elena S. Novichkova, Alexei E. Kazakov, Mikhail S. Gelfand, Adam P. Arkin, Andrey A. Mironov, Inna Dubchak: RegPredict: an integrated system for regulon inference in prokaryotes by comparative genomics approach. Nucleic Acids Research 38(Web-Server-Issue): 299-307 (2010)
17		Steven S. Andrews, Nathan J. Addy, Roger Brent, Adam P. Arkin: Detailed Simulations of Cell Biology with Smoldyn 2.1. PLoS Computational Biology 6(3): (2010)
16		Sharon Aviran, Priya S. Shah, David V. Schaffer, Adam P. Arkin: Computational Models of HIV-1 Resistance to Gene Therapy Elucidate Therapy Design Principles. PLoS Computational Biology 6(8): (2010)
15		Ron Skupsky, John C. Burnett, Jonathan E. Foley, David V. Schaffer, Adam P. Arkin: HIV Promoter Integration Site Primarily Modulates Transcriptional Burst Size Rather Than Frequency. PLoS Computational Biology 6(9): (2010)
	2009
14		Steven S. Andrews, Tuan Dinh, Adam P. Arkin: Stochastic Models of Biological Processes. Encyclopedia of Complexity and Systems Science 2009: 8730-8749
	2008
13		Patrick Flaherty, Mala L. Radhakrishnan, Tuan Dinh, Robert A. Rebres, Tamara I. Roach, Michael I. Jordan, Adam P. Arkin: A Dual Receptor Crosstalk Model of G-Protein-Coupled Signal Transduction. PLoS Computational Biology 4(9): (2008)
	2007
12		Alexei E. Kazakov, Michael J. Cipriano, Pavel S. Novichkov, Simon Minovitsky, Dmitry V. Vinogradov, Adam P. Arkin, Andrey A. Mironov, Mikhail S. Gelfand, Inna Dubchak: RegTransBase - a database of regulatory sequences and interactions in a wide range of prokaryotic genomes. Nucleic Acids Research 35(Database-Issue): 407-412 (2007)
11		Morgan N. Price, Paramvir S. Dehal, Adam P. Arkin: Orthologous Transcription Factors in Bacteria Have Different Functions and Regulate Different Genes. PLoS Computational Biology 3(9): (2007)
	2006
10		Morgan N. Price, Adam P. Arkin, Eric J. Alm: OpWise: Operons aid the identification of differentially expressed genes in bacterial microarray experiments. BMC Bioinformatics 7: 19 (2006)
9		Eric J. Alm, Katherine H. Huang, Adam P. Arkin: The Evolution of Two-Component Systems in Bacteria Reveals Different Strategies for Niche Adaptation. PLoS Computational Biology 2(11): (2006)
8		Hiroyuki Kuwahara, Chris J. Myers, Michael S. Samoilov, Nathan A. Barker, Adam P. Arkin: Automated Abstraction Methodology for Genetic Regulatory Networks. T. Comp. Sys. Biology: 150-175 (2006)
	2005
7		Patrick Flaherty, Michael I. Jordan, Adam P. Arkin: Robust design of biological experiments. NIPS 2005
6		Patrick Flaherty, Guri Giaever, Jochen Kumm, Michael I. Jordan, Adam P. Arkin: A latent variable model for chemogenomic profiling. Bioinformatics 21(15): 3286-3293 (2005)
5		Dmitry A. Rodionov, Inna Dubchak, Adam P. Arkin, Eric J. Alm, Mikhail S. Gelfand: Dissimilatory Metabolism of Nitrogen Oxides in Bacteria: Comparative Reconstruction of Transcriptional Networks. PLoS Computational Biology 1(5): (2005)
	2004
4		Matthew D. Onsum, Adam P. Arkin: Autonomous Mobile Robot Control Based on White Blood Cell Chemotaxis. CMSB 2004: 9-19
	2003
3		Adam P. Arkin: Motifs and Modules in Cellular Signal Processing: Applications to Microbial Stress Response Pathways. CSB 2003: 33
2		Michael Hucka, Andrew Finney, Herbert M. Sauro, H. Bolouri, John C. Doyle, Hiroaki Kitano, Adam P. Arkin, Benjamin J. Bornstein, D. Bray, A. Cornish-Bowden, Autumn A. Cuellar, Serge Dronov, Ernst Dieter Gilles, Martin Ginkel, Victoria Gor, Igor Goryanin, W. J. Hedley, T. Charles Hodgman, J. H. Hofmeyr, Peter J. Hunter, Nick S. Juty, J. L. Kasberger, Andreas Kremling, Ursula Kummer, Nicolas Le Novère, Leslie M. Loew, D. Lucio, Pedro Mendes, E. Minch, Eric Mjolsness, Yoichi Nakayama, M. R. Nelson, Poul M. F. Nielsen, T. Sakurada, James C. Schaff, Bruce E. Shapiro, Thomas Simon Shimizu, Hugh D. Spence, Jörg Stelling, Koichi Takahashi, Masaru Tomita, J. Wagner, J. Wang: The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models. Bioinformatics 19(4): 524-531 (2003)
	1992
1		D. C. Youvan, Adam P. Arkin, M. M. Yang: Recursive Ensemble Mutagenesis: A Combinatorial Optimization Technique for Protein Engineering. PPSN 1992: 403-412

Coauthor Index

1	Nathan J. Addy	[17]
2	Eric J. Alm	[5] [9] [10] [19]
3	Steven S. Andrews	[14] [17]
4	Sharon Aviran	[16]
5	Nathan A. Barker	[8]
6	John T. Bates	[19] [21]
7	Jason K. Baumohl	[19]
8	H. Bolouri	[2]
9	Benjamin J. Bornstein	[2]
10	D. Bray	[2]
11	Roger Brent	[17]
12	John C. Burnett	[15]
13	John-Marc Chandonia	[22]
14	Dylan Chivian	[19] [21]
15	Michael J. Cipriano	[12]
16	A. Cornish-Bowden	[2]
17	Autumn A. Cuellar	[2]
18	Paramvir S. Dehal	[11] [19]
19	Tuan Dinh	[13] [14]
20	John Doyle (John C. Doyle)	[2]
21	Serge Dronov	[2]
22	Inna Dubchak	[5] [12] [18] [19] [20]
23	Andrew Finney	[2]
24	Patrick Flaherty	[6] [7] [13]
25	Jonathan E. Foley	[15]
26	Greg D. Friedland	[19]
27	Mikhail S. Gelfand	[5] [12] [18] [20]
28	Guri Giaever	[6]
29	Ernst Dieter Gilles	[2]
30	Martin Ginkel	[2]
31	Victoria Gor	[2]
32	Igor Goryanin	[2]
33	W. J. Hedley	[2]
34	Charlie Hodgman (T. Charles Hodgman)	[2]
35	J. H. Hofmeyr	[2]
36	Katherine H. Huang	[9] [19]
37	Y. Wayne Huang	[22]
38	Michael Hucka	[2]
39	Peter J. Hunter	[2]
40	Marcin P. Joachimiak	[19]
41	Michael I. Jordan	[6] [7] [13]
42	Nick S. Juty	[2]
43	J. L. Kasberger	[2]
44	Alexei E. Kazakov	[12] [18]
45	Keith Keller	[19]
46	Hiroaki Kitano	[2]
47	Andreas Kremling	[2]
48	Jochen Kumm	[6]
49	Ursula Kummer	[2]
50	Hiroyuki Kuwahara	[8]
51	Olga N. Laikova	[20]
52	Leslie M. Loew	[2]
53	D. Lucio	[2]
54	Pedro Mendes	[2]
55	E. Minch	[2]
56	Simon Minovitsky	[12]
57	Andrey A. Mironov	[12] [18]
58	Eric Mjolsness	[2]
59	Chris J. Myers	[8]
60	Yoichi Nakayama	[2]
61	M. R. Nelson	[2]
62	Poul M. F. Nielsen	[2]
63	Nicolas Le Novère	[2]
64	Pavel S. Novichkov	[12] [18] [19] [20]
65	Elena S. Novichkova	[18] [20]
66	Matthew D. Onsum	[4]
67	Morgan N. Price	[10] [11] [19]
68	Mala L. Radhakrishnan	[13]
69	Robert A. Rebres	[13]
70	Tamara I. Roach	[13]
71	Dmitry A. Rodionov	[5] [18] [20]
72	T. Sakurada	[2]
73	Michael S. Samoilov	[8]
74	Herbert M. Sauro	[2]
75	James C. Schaff	[2]
76	David V. Schaffer	[15] [16]
77	Priya S. Shah	[16]
78	Bruce E. Shapiro	[2]
79	Thomas Simon Shimizu	[2]
80	Ron Skupsky	[15]
81	Hugh D. Spence	[2]
82	Elena D. Stavrovskaya	[18]
83	Jörg Stelling	[2]
84	Koichi Takahashi	[2]
85	Masaru Tomita	[2]
86	Dmitry V. Vinogradov	[12]
87	J. Wagner	[2]
88	J. Wang	[2]
89	M. M. Yang	[1]
90	D. C. Youvan	[1]

Colors in the list of coauthors

Last update Sat May 26 04:23:17 2012 CET by the DBLP Team — Data released under the ODC-BY 1.0 license — See also our legal information page