Mark S. Alber

	2010
20		Faruck Morcos, Marcin Sikora, Mark S. Alber, Dale Kaiser, Jesús A. Izaguirre: Estimation of Protein and Domain Interactions in the Switching Motility System of Myxococcus Xanthus. Pacific Symposium on Biocomputing 2010: 157-165
19		Jian Mu, Xiaomin Liu, Malgorzata M. Kamocka, Zhiliang Xu, Mark S. Alber, Elliot D. Rosen, Danny Z. Chen: Segmentation, Reconstruction, and Analysis of Blood Thrombus Formation in 3D 2-Photon Microscopy Images. EURASIP J. Adv. Sig. Proc. 2010: (2010)
18		Faruck Morcos, Marcin Sikora, Mark S. Alber, Dale Kaiser, Jesús A. Izaguirre: Belief propagation estimation of protein and domain interactions using the sum-product algorithm. IEEE Transactions on Information Theory 56(2): 742-755 (2010)
	2009
17		Jian Mu, Xiaomin Liu, Malgorzata M. Kamocka, Zhiliang Xu, Mark S. Alber, Elliot D. Rosen, Danny Z. Chen: Segmentation, reconstruction, and analysis of blood thrombi in 2-photon microscopy images. CBMS 2009: 1-8
16		Mark S. Alber, Richard Gejji, Bogdan Kazmierczak: Existence of global solutions of a macroscopic model of cellular motion in a chemotactic field. Appl. Math. Lett. 22(11): 1645-1648 (2009)
15		Jianfeng Zhu, Yong-Tao Zhang, Stuart A. Newman, Mark S. Alber: Application of Discontinuous Galerkin Methods for Reaction-Diffusion Systems in Developmental Biology. J. Sci. Comput. 40(1-3): 391-418 (2009)
	2007
14		Nan Chen, James A. Glazier, Jesús A. Izaguirre, Mark S. Alber: A parallel implementation of the Cellular Potts Model for simulation of cell-based morphogenesis. Computer Physics Communications 176(11-12): 670-681 (2007)
13		Trevor M. Cickovski, Kedar Aras, Maciej Swat, Roeland Merks, Tilmann Glimm, H. George E. Hentschel, Mark S. Alber, James A. Glazier, Stuart A. Newman, Jesús A. Izaguirre: From Genes to Organisms Via the Cell: A Problem-Solving Environment for Multicellular Development. Computing in Science and Engineering 9(4): 50-60 (2007)
12		Scott Christley, Xuelian Zhu, Stuart A. Newman, Mark S. Alber: Multiscale Agent-based Simulation for Chondrogenic Pattern Formation in Vitro. Cybernetics and Systems 38(7): 707-727 (2007)
11		Yilin Wu, Yi Jiang, Dale Kaiser, Mark S. Alber: Social Interactions in Myxobacterial Swarming. PLoS Computational Biology 3(12): (2007)
10		Scott Christley, Mark S. Alber, Stuart A. Newman: Patterns of Mesenchymal Condensation in a Multiscale, Discrete Stochastic Model. PLoS Computational Biology 3(4): (2007)
	2006
9		Yilin Wu, Nan Chen, Matthew Rissler, Yi Jiang, Dale Kaiser, Mark S. Alber: CA Models of Myxobacteria Swarming. ACRI 2006: 192-203
8		Nan Chen, James A. Glazier, Mark S. Alber: A Parallel Implementation of the Cellular Potts Model for Simulation of Cell-Based Morphogenesis. ACRI 2006: 58-67
7		Yi Jiang, Olga Sozinova, Mark S. Alber: On Modeling Complex Collective Behavior in Myxobacteria. Advances in Complex Systems 9(4): 353-367 (2006)
	2005
6		Trevor M. Cickovski, Chengbang Huang, Rajiv Chaturvedi, Tilmann Glimm, H. George E. Hentschel, Mark S. Alber, James A. Glazier, Stuart A. Newman, Jesús A. Izaguirre: A Framework for Three-Dimensional Simulation of Morphogenesis. IEEE/ACM Trans. Comput. Biology Bioinform. 2(4): 273-288 (2005)
	2004
5		Rajiv Chaturvedi, Chengbang Huang, Jesús A. Izaguirre, Stuart A. Newman, James A. Glazier, Mark S. Alber: A Hybrid Discrete-Continuum Model for 3-D Skeletogenesis of the Vertebrate Limb. ACRI 2004: 543-552
4		Arancha Casal, Cenk Sumen, Tim Reddy, Mark S. Alber, Peter P. Lee: A Cellular Automata Model of Early T Cell Recognition. ACRI 2004: 553-560
3		Jesús A. Izaguirre, Rajiv Chaturvedi, Chengbang Huang, Trevor M. Cickovski, J. Coffland, G. Thomas, Gabor Forgacs, Mark S. Alber, G. Hentschel, Stuart A. Newman, James A. Glazier: COMPUCELL, a multi-model framework for simulation of morphogenesis. Bioinformatics 20(7): 1129-1137 (2004)
	2003
2		Rajiv Chaturvedi, Jesús A. Izaguirre, Chengbang Huang, Trevor M. Cickovski, P. Virtue, G. Thomas, Gabor Forgacs, Mark S. Alber, G. Hentschel, Stuart A. Newman, James A. Glazier: Multi-model Simulations of Chicken Limb Morphogenesis. International Conference on Computational Science 2003: 39-49
	2001
1		Mark S. Alber, Charles Miller: Peakon solutions of the shallow water equation. Appl. Math. Lett. 14(1): 93-98 (2001)

Coauthor Index

1	Kedar Aras	[13]
2	Arancha Casal	[4]
3	Rajiv Chaturvedi	[2] [3] [5] [6]
4	Danny Z. Chen	[17] [19]
5	Nan Chen	[8] [9] [14]
6	Scott Christley	[10] [12]
7	Trevor M. Cickovski	[2] [3] [6] [13]
8	J. Coffland	[3]
9	Gabor Forgacs	[2] [3]
10	Richard Gejji	[16]
11	James A. Glazier	[2] [3] [5] [6] [8] [13] [14]
12	Tilmann Glimm	[6] [13]
13	G. Hentschel	[2] [3]
14	H. George E. Hentschel	[6] [13]
15	Chengbang Huang	[2] [3] [5] [6]
16	Jesús A. Izaguirre	[2] [3] [5] [6] [13] [14] [18] [20]
17	Yi Jiang	[7] [9] [11]
18	Dale Kaiser	[9] [11] [18] [20]
19	Malgorzata M. Kamocka	[17] [19]
20	Bogdan Kazmierczak	[16]
21	Peter P. Lee	[4]
22	Xiaomin Liu	[17] [19]
23	Roeland Merks	[13]
24	Charles Miller	[1]
25	Faruck Morcos	[18] [20]
26	Jian Mu	[17] [19]
27	Stuart A. Newman	[2] [3] [5] [6] [10] [12] [13] [15]
28	Tim Reddy	[4]
29	Matthew Rissler	[9]
30	Elliot D. Rosen	[17] [19]
31	Marcin Sikora	[18] [20]
32	Olga Sozinova	[7]
33	Cenk Sumen	[4]
34	Maciej Swat	[13]
35	G. Thomas	[2] [3]
36	P. Virtue	[2]
37	Yilin Wu	[9] [11]
38	Zhiliang Xu	[17] [19]
39	Yong-Tao Zhang	[15]
40	Jianfeng Zhu	[15]
41	Xuelian Zhu	[12]

Colors in the list of coauthors

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