Ruedi Aebersold

	2011
10		Mi-Youn K. Brusniak, Sung-Tat Kwok, Mark Christiansen, David Campbell, Lukas Reiter, Paola Picotti, Ulrike Kusebauch, Hector Ramos, Eric W. Deutsch, Jingchun Chen, Robert L. Moritz, Ruedi Aebersold: ATAQS: A computational software tool for high throughput transition optimization and validation for selected reaction monitoring mass spectrometry. BMC Bioinformatics 12: 78 (2011)
9		Abdullah Kahraman, Lars Malmström, Ruedi Aebersold: Xwalk: computing and visualizing distances in cross-linking experiments. Bioinformatics 27(15): 2163-2164 (2011)
	2010
8		Manfred Claassen, Ruedi Aebersold, Joachim M. Buhmann: Proteome Coverage Prediction for Integrated Proteomics Datasets. RECOMB 2010: 96-109
	2009
7		Sandra N. Loevenich, Erich Brunner, Nichole L. King, Eric W. Deutsch, Stephen E. Stein, Ruedi Aebersold, Ernst Hafen: The Drosophila melanogaster PeptideAtlas facilitates the use of peptide data for improved fly proteomics and genome annotation. BMC Bioinformatics 10: (2009)
6		Manfred Claassen, Ruedi Aebersold, Joachim M. Buhmann: Proteome coverage prediction with infinite Markov models. Bioinformatics 25(12): (2009)
5		Nils Gehlenborg, Wei Yan, Inyoul Y. Lee, Hyuntae Yoo, Kay Nieselt, Daehee Hwang, Ruedi Aebersold, Leroy Hood: Prequips - an extensible software platform for integration, visualization and analysis of LC-MS/MS proteomics data. Bioinformatics 25(5): 682-683 (2009)
	2008
4		Mi-Youn K. Brusniak, Bernd Bodenmiller, David Campbell, Kelly Cooke, James Eddes, Andrew Garbutt, Hollis Lau, Simon Letarte, Lukas N. Mueller, Vagisha Sharma, Olga Vitek, Ning Zhang, Ruedi Aebersold, Julian D. Watts: Corra: Computational framework and tools for LC-MS discovery and targeted mass spectrometry-based proteomics. BMC Bioinformatics 9: (2008)
3		Hector Ramos, P. Shannon, Ruedi Aebersold: The protein information and property explorer: an easy-to-use, rich-client web application for the management and functional analysis of proteomic data. Bioinformatics 24(18): 2110-2111 (2008)
2		Daehee Hwang, Ning Zhang, Hookeun Lee, Eugene Yi, Hui Zhang, Inyoul Y. Lee, Leroy Hood, Ruedi Aebersold: MS-BID: a Java package for label-free LC-MS-based comparative proteomic analysis. Bioinformatics 24(22): 2641-2642 (2008)
	2006
1		Frank Desiere, Eric W. Deutsch, Nichole L. King, Alexey I. Nesvizhskii, Parag Mallick, Jimmy Eng, Sharon Chen, James Eddes, Sandra N. Loevenich, Ruedi Aebersold: The PeptideAtlas project. Nucleic Acids Research 34(Database-Issue): 655-658 (2006)

Coauthor Index

1	Bernd Bodenmiller	[4]
2	Erich Brunner	[7]
3	Mi-Youn K. Brusniak	[4] [10]
4	Joachim M. Buhmann	[6] [8]
5	David Campbell	[4] [10]
6	Jingchun Chen	[10]
7	Sharon Chen	[1]
8	Mark Christiansen	[10]
9	Manfred Claassen	[6] [8]
10	Kelly Cooke	[4]
11	Frank Desiere	[1]
12	Eric W. Deutsch	[1] [7] [10]
13	James Eddes	[1] [4]
14	Jimmy Eng	[1]
15	Andrew Garbutt	[4]
16	Nils Gehlenborg	[5]
17	Ernst Hafen	[7]
18	Leroy Hood	[2] [5]
19	Daehee Hwang	[2] [5]
20	Abdullah Kahraman	[9]
21	Nichole L. King	[1] [7]
22	Ulrike Kusebauch	[10]
23	Sung-Tat Kwok	[10]
24	Hollis Lau	[4]
25	Hookeun Lee	[2]
26	Inyoul Y. Lee	[2] [5]
27	Simon Letarte	[4]
28	Sandra N. Loevenich	[1] [7]
29	Parag Mallick	[1]
30	Lars Malmström	[9]
31	Robert L. Moritz	[10]
32	Lukas N. Mueller	[4]
33	Alexey I. Nesvizhskii	[1]
34	Kay Nieselt	[5]
35	Paola Picotti	[10]
36	Hector Ramos	[3] [10]
37	Lukas Reiter	[10]
38	P. Shannon	[3]
39	Vagisha Sharma	[4]
40	Stephen E. Stein	[7]
41	Olga Vitek	[4]
42	Julian D. Watts	[4]
43	Wei Yan	[5]
44	Eugene Yi	[2]
45	Hyuntae Yoo	[5]
46	Hui Zhang	[2]
47	Ning Zhang	[2] [4]

Colors in the list of coauthors

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