Ruben Abagyan

	2012
27		Ruben Abagyan: Computational chemistry in 25 years. Journal of Computer-Aided Molecular Design 26(1): 9-10 (2012)
26		Irina Kufareva, Andrey V. Ilatovskiy, Ruben Abagyan: Pocketome: an encyclopedia of small-molecule binding sites in 4D. Nucleic Acids Research 40(Database-Issue): 535-540 (2012)
	2011
25		Andrew J. Bordner, Barry Zorman, Ruben Abagyan: Efficient molecular mechanics simulations of the folding, orientation, and assembly of peptides in lipid bilayers using an implicit atomic solvation model. Journal of Computer-Aided Molecular Design 25(10): 895-911 (2011)
	2010
24		Manuel Rueda, Vsevolod Katritch, Eugene Raush, Ruben Abagyan: SimiCon: a web tool for protein-ligand model comparison through calculation of equivalent atomic contacts. Bioinformatics 26(21): 2784-2785 (2010)
23		A. V. Grigoryan, Irina Kufareva, Maxim Totrov, Ruben Abagyan: Spatial chemical distance based on atomic property fields. Journal of Computer-Aided Molecular Design 24(3): 173-182 (2010)
22		So-Jung Park, Irina Kufareva, Ruben Abagyan: Improved docking, screening and selectivity prediction for small molecule nuclear receptor modulators using conformational ensembles. Journal of Computer-Aided Molecular Design 24(5): 459-471 (2010)
	2009
21		José Ignacio Garzón, José Ramón Lopéz-Blanco, Carles Pons, Julio A. Kovacs, Ruben Abagyan, Juan Fernández-Recio, Pablo Chacón: FRODOCK: a new approach for fast rotational protein-protein docking. Bioinformatics 25(19): 2544-2551 (2009)
20		Kimberly A. Reynolds, Vsevolod Katritch, Ruben Abagyan: Identifying conformational changes of the beta2 adrenoceptor that enable accurate prediction of ligand/receptor interactions and screening for GPCR modulators. Journal of Computer-Aided Molecular Design 23(5): 273-288 (2009)
	2008
19		George Nicola, Colin A. Smith, Ruben Abagyan: New Method for the Assessment of All Drug-Like Pockets Across a Structural Genome. Journal of Computational Biology 15(3): 231-240 (2008)
	2007
18		José Ignacio Garzón, Julio A. Kovacs, Ruben Abagyan, Pablo Chacón: ADP_EM: fast exhaustive multi-resolution docking for high-throughput coverage. Bioinformatics 23(4): 427-433 (2007)
17		José Ignacio Garzón, Julio A. Kovacs, Ruben Abagyan, Pablo Chacón: DFprot: a webtool for predicting local chain deformability. Bioinformatics 23(7): 901-902 (2007)
	2006
16		Levon Budagyan, Ruben Abagyan: Weighted quality estimates in machine learning. Bioinformatics 22(21): 2597-2603 (2006)
	2005
15		Andrew J. Bordner, Ruben Abagyan: REVCOM: a robust Bayesian method for evolutionary rate estimation. Bioinformatics 21(10): 2315-2321 (2005)
	2004
14		Brian Marsden, Ruben Abagyan: SAD - a normalized structural alignment database: improving sequence-structure alignments. Bioinformatics 20(15): 2333-2344 (2004)
	2003
13		Vsevolod Katritch, Maxim Totrov, Ruben Abagyan: ICFF: A new method to incorporate implicit flexibility into an internal coordinate force field. Journal of Computational Chemistry 24(2): 254-265 (2003)
12		Badry D. Bursulaya, Maxim Totrov, Ruben Abagyan, Charles L. Brooks III: Comparative study of several algorithms for flexible ligand docking. Journal of Computer-Aided Molecular Design 17(11): 755-763 (2003)
	2002
11		Juan Fernández-Recio, Maxim Totrov, Ruben Abagyan: Screened Charge Electrostatic Model in Protein-Protein Docking Simulations. Pacific Symposium on Biocomputing 2002: 552-565
10		Ruben Abagyan: Computational structural proteomics and virtual ligand screening. RECOMB 2002: 1
9		Yingyao Zhou, Ruben Abagyan: Match-Only Integral Distribution (MOID) Algorithm for high-density oligonucleotide array analysis. BMC Bioinformatics 3: 3 (2002)
	2000
8		Timothy Cardozo, Serge Batalov, Ruben Abagyan: Estimating Local Backbone Structural Deviation in Homology Models. Computers & Chemistry 24(1): 13-31 (2000)
7		Anton V. Filikov, Venkatraman Mohan, Timothy A. Vickers, Richard H. Griffey, P. Dan Cook, Ruben Abagyan, Thomas L. James: Identification of ligands for RNA targets via structure-based virtual screening: HIV-1 TAR. Journal of Computer-Aided Molecular Design 14(6): 593-610 (2000)
	1999
6		Maxim Totrov, Ruben Abagyan: Derivation of sensitive discrimination potential for virtual ligand screening. RECOMB 1999: 312-320
	1998
5		Ruben Abagyan: Challenges of biomolecular structure prediction (abstract). RECOMB 1998: 1
	1997
4		Ruben Abagyan, Serge Batalov, Timothy Cardozo, Maxim Totrov: From fold recognition to flexible docking. German Conference on Bioinformatics 1997: 9-10
	1994
3		Patrick Argos, Ruben Abagyan: The Protein Folding Problem: Finding a Few Minimums in a Near Infinite Space. Computers & Chemistry 18(3): 225-231 (1994)
2		Maxim Totrov, Ruben Abagyan: Efficient Parallelization of the Energy, Surface, and Dericative Calculations for Internal Coordinate Mechanics. Journal of Computational Chemistry 15(10): 1105-1112 (1994)
1		Ruben Abagyan, Maxim Totrov, Dmitry Kuznetsov: ICM - A New Method for Protein Modeling and Design: Applications to Docking and Strucutre Prediction from the Distorted Native Conformation. Journal of Computational Chemistry 15(5): 488-506 (1994)

Coauthor Index

1	Patrick Argos	[3]
2	Serge Batalov	[4] [8]
3	Andrew J. Bordner	[15] [25]
4	Charles L. Brooks III	[12]
5	Levon Budagyan	[16]
6	Badry D. Bursulaya	[12]
7	Timothy Cardozo	[4] [8]
8	Pablo Chacón	[17] [18] [21]
9	P. Dan Cook	[7]
10	Juan Fernández-Recio	[11] [21]
11	Anton V. Filikov	[7]
12	José Ignacio Garzón	[17] [18] [21]
13	Richard H. Griffey	[7]
14	A. V. Grigoryan	[23]
15	Andrey V. Ilatovskiy	[26]
16	Thomas L. James	[7]
17	Vsevolod Katritch	[13] [20] [24]
18	Julio A. Kovacs	[17] [18] [21]
19	Irina Kufareva	[22] [23] [26]
20	Dmitry Kuznetsov	[1]
21	José Ramón Lopéz-Blanco	[21]
22	Brian Marsden	[14]
23	Venkatraman Mohan	[7]
24	George Nicola	[19]
25	So-Jung Park	[22]
26	Carles Pons	[21]
27	Eugene Raush	[24]
28	Kimberly A. Reynolds	[20]
29	Manuel Rueda	[24]
30	Colin A. Smith	[19]
31	Maxim Totrov	[1] [2] [4] [6] [11] [12] [13] [23]
32	Timothy A. Vickers	[7]
33	Yingyao Zhou	[9]
34	Barry Zorman	[25]

Colors in the list of coauthors

Last update Fri May 25 03:49:23 2012 CET by the DBLP Team — Data released under the ODC-BY 1.0 license — See also our legal information page