IWPACBB 2010: Guimarães, Portugal
Miguel P. Rocha, Florentino Fernández Riverola, Hagit Shatkay, Juan M. Corchado (Eds.): Advances in Bioinformatics - 4th International Workshop on Practical Applications of Computational Biology and Bioinformatics 2010 (IWPACBB 2010), Guimarães, Portugal, 16-18 June 2010. Springer 2010 Advances in Soft Computing 74 ISBN 978-3-642-13213-1
Microarrays
Liliana López Kleine, Víctor Andrés Vera Ruiz: Highlighting Differential Gene Expression between Two Condition Microarrays through Heterogeneous Genomic Data: Application to Lesihmania infantum Stages Comparison. 1-8
Héctor Gómez, Daniel Glez-Peña, Miguel Reboiro-Jato, Reyes Pavón, Fernando Díaz, Florentino Fdez-Riverola: An Experimental Evaluation of a Novel Stochastic Method for Iterative Class Discovery on Real Microarray Datasets. 9-16
Juan Francisco de Paz, Ana Belén Gil, Emilio Corchado: Automatic Workflow during the Reuse Phase of a CBP System Applied to Microarray Analysis. 17-24
Miguel Reboiro-Jato, Daniel Glez-Peña, Juan F. Gálvez, Rosalia Laza, Fernando Díaz, Florentino Fdez-Riverola: A Comparative Study of Microarray Data Classification Methods Based on Ensemble Biological Relevant Gene Sets. 25-32
Data Mining and Data Integration
Rui Camacho, Rita Ferreira, Natacha Rosa, Vânia Guimarães, Nuno A. Fonseca, Vítor Santos Costa, Miguel de Sousa, Alexandre Magalhães: Predicting the Start of Protein alpha-Helices Using Machine Learning Algorithms. 33-41
Orlando Anunciação, Bruno C. Gomes, Susana Vinga, Jorge Gaspar, Arlindo L. Oliveira, José Rueff: A Data Mining Approach for the Detection of High-Risk Breast Cancer Groups. 43-51
Alfonso Fernández, Abraham Duarte, Rosa Hernández, Ángel Sánchez: GRASP for Instance Selection in Medical Data Sets. 53-60
Joel Arrais, João E. Pereira, Pedro Lopes, Sérgio Matos, José Luís Oliveira: Improving Cross Mapping in Biomedical Databases. 69-76
Wieslaw Chmielnicki, Katarzyna Stapor, Irena Roterman-Konieczna: An Efficient Multi-class Support Vector Machine Classifier for Protein Fold Recognition. 77-84
António Gaspar-Cunha: Feature Selection Using Multi-Objective Evolutionary Algorithms: Application to Cardiac SPECT Diagnosis. 85-92
Phylogenetics and Sequence Analysis
Gabriel Cardona, Mercè Llabrés, Francesc Rosselló: Two Results on Distances for Phylogenetic Networks. 93-100
José P. Lousado, José Luís Oliveira, Gabriela R. Moura, Manuel A. S. Santos: An Application for Studying Tandem Repeats in Orthologous Genes. 109-115
Mateus Patricio, Federico Abascal, Rafael Zardoya, David Posada: Accurate Selection of Models of Protein Evolution. 117-121
Roberto Blanco, Elvira Mayordomo, Esther Montes, Rafael Mayo, Angelines Alberto: Scalable Phylogenetics through Input Preprocessing. 123-130
Arnau Mir, Francesc Rosselló: The Median of the Distance between Two Leaves in a Phylogenetic Tree. 131-135
María Jesús García-Pereira, Armando Caballero, Humberto Quesada: In Silico AFLP: An Application to Assess What Is Needed to Resolve a Phylogeny. 137-141
Sérgio A. D. Deusdado, Paulo Carvalho: Employing Compact Intra-genomic Language Models to Predict Genomic Sequences and Characterize Their Entropy. 143-150
Biomedical Applications
Elisangela V. Costa, M. Emília Sousa, J. Rocha, Carlos A. Montanari, M. Madalena Pinto: Structure Based Design of Potential Inhibitors of Steroid Sulfatase. 151-156
Ignacio V. Martínez Espinosa, Enrique J. Gómez Aguilera, María E. Hernando Pérez, Ricardo Villares, José Mario Mellado García: Agent-Based Model of the Endocrine Pancreas and Interaction with Innate Immune System. 157-164
Sara Silva, Leonardo Vanneschi: State-of-the-Art Genetic Programming for Predicting Human Oral Bioavailability of Drugs. 165-173
Andreia Palmeira, Freddy Rodrigues, Emília Sousa, Madalena Pinto, M. Helena Vasconcelos, Miguel X. Fernandes: Pharmacophore-Based Screening as a Clue for the Discovery of New P-Glycoprotein Inhibitors. 175-180
Bioinformatics Applications
Joana P. Gonçalves, Sara C. Madeira: e-BiMotif: Combining Sequence Alignment and Biclustering to Unravel Structured Motifs. 181-191
Sónia Carneiro, Silas Granato Villas-Bôas, Isabel Rocha, Eugénio C. Ferreira: Applying a Metabolic Footprinting Approach to Characterize the Impact of the Recombinant Protein Production in Escherichia coli. 193-200
Miguel Vázquez, Rubén Nogales, Pedro Carmona-Saez, Alberto Pascual, Juan Pavón: Rbbt: A Framework for Fast Bioinformatics Development with Ruby. 201-208
José P. Faria, Miguel Rocha, Rick L. Stevens, Christopher S. Henry: Analysis of the Effect of Reversibility Constraints on the Predictions of Genome-Scale Metabolic Models. 209-215
Paulo Maia, Marcellinus Pont, Jean-François Tomb, Isabel Rocha, Miguel Rocha: Enhancing Elementary Flux Modes Analysis Using Filtering Techniques in an Integrated Environment. 217-224
Leandro S. Marcolino, Bráulio Roberto Gonçalves Marinho Couto, Marcos Augusto dos Santos: Genome Visualization in Space. 225-232
José C. Calvo, Julio Ortega, Mancia Anguita: A Hybrid Scheme to Solve the Protein Structure Prediction Problem. 233-240



