GCB 2008: Dresden, Germany
Andreas Beyer, Michael Schroeder (Eds.): Proceedings of the German Conference on Bioinformatics, GCB 2008, September 9-12, 2008, Dresden, Germany. GI 2008 LNI
Alexey V. Antonov, Sabine Dietmann, Hans-Werner Mewes: Consecutive KEGG Pathway Models for the Interpretation of High-throughput Genomics Data. 1-9
Stephan Symons, Kirstin Weber, Michael Bonin, Kay Nieselt: ResqMi - a Versatile Algorithm and Software for Resequencing Microarrays. 10-20
Nicolas Goffard, Tancred Frickey, Nijat Imin, Georg Weiller: Exploring the Enzyme Neighbourhood to Interpret Gene Expression Data. 21-29
Caroline C. Friedel, Ralf Zimmer: Identifying the Topology of Protein Complexes from Affinity Purification Assays. 30-43
Thomas Fober, Eyke Hüllermeier, Marco Mernberger: Evolutionary Construction of Multiple Graph Alignments for the Structural Analysis of Biomolecules. 44-53
Oron Vanunu, Roded Sharan: A Propagation-based Algorithm for Inferring Gene-Disease Assocations. 54-52
Susanne Eyrisch, Volkhard Helms: Designing Binding Pockets on Protein Surfaces using the A* Algorithm. 64-74
Florian Teichert, Ugo Bastolla, Markus Porto: Protein Structure Alignment through a Contact Topology Profile using SABERTOOTH. 75-84
Martin Strauch, C. Giovanni Galizia: Registration to a Neuroanatomical Reference Atlas - Identifying Glomeruli in Optical Recordings of the Honeybee Brain. 85-95
Utz J. Pape, Holger Klein, Martin Vingron: Statistical Detection of Cooperative Transcription Factors with Similarity Adjustment. 96-105
Lukas Windhager, Ralf Zimmer: Intuitive Modeling of Dynamic Systems with Petri Nets and Fuzzy Logic. 106-115
Michael Seifert, Jens Keilwagen, Marc Strickert, Ivo Grosse: Utilizing Promoter Pair Orientations for HMM-based Analysis of ChIP-chip Data. 116-127
Thomas Zichner, Zelmina Lubovac, Björn Olsson: Temporal Analysis of Oncogenesis Using MicroRNA Expression Data. 128-137
Birgit Möller, Oliver Gress, Stefan Posch: A Comparative Study of Robust Feature Detectors for 2D Electrophoresis Gel Image Registration. 138-147
Kristian Kaufmann, Jens Meiler: Small Molecules as Rotamers: Generation and Docking in RosettaLigand. 148-157
Sebastian J. Schultheiß, Wolfgang Busch, Jan Lohmann, Oliver Kohlbacher, Gunnar Rätsch: KIRMES: Kernel-based Identification of Regulatory Modules in Euchromatic Sequences. 158-167
Markus Riester, Peter F. Stadler, Konstantin Klemm: FRANz: Fast Reconstruction of Wild Pedigrees. 168-177
Steffen Heyne, Sebastian Will, Michael Beckstette, Rolf Backofen: Lightweight Comparison of RNAs based on Exact Sequence-structure Matches. 189-



