Keynote Presentations

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  Kenneth H. Buetow: Enabling the Molecular Medicine Revolution Through Network-Centric Biomedicine. 1-2
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  Junhyong Kim: Phyl-O'Data (POD) from Tree of Life: Integration Challenges from Yellow Slimy Things to Black Crunchy Stuff. 3-5

New Architectures and Experience on Using Systems

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  Luciano Barbosa, Sumit Tandon, Juliana Freire: Automatically Constructing a Directory of Molecular Biology Databases. 6-16
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  Chinh Dang, Andrew Sodt, Christopher Lau, Brian Youngstrom, Lydia Ng, Leonard Kuan, Sayan D. Pathak, Allan Jones, Michael Hawrylycz: The Allen Brain Atlas: Delivering Neuroscience to the Web on a Genome Wide Scale. 17-26
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  Jason Tsong-Li Wang, Dongrong Wen, Bruce A. Shapiro, Katherine G. Herbert, Jing Li, Kaushik Ghosh: Toward an Integrated RNA Motif Database. 27-36
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  Can Türker, Etzard Stolte, Dieter Joho, Ralph Schlapbach: B-Fabric: A Data and Application Integration Framework for Life Sciences Research. 37-47
• 
  Rami Rifaieh, Roger Unwin, Jeremy Carver, Mark A. Miller: SWAMI: Integrating Biological Databases and Analysis Tools Within User Friendly Environment. 48-58
• 
  Steve Pettifer, Katy Wolstencroft, Pinar Alper, Teresa K. Attwood, Alain Coletta, Carole A. Goble, Peter Li, Philip McDermott, James Marsh, Tom Oinn, James Sinnott, David Thorne: ^myGrid and UTOPIA: An Integrated Approach to Enacting and Visualising in Silico Experiments in the Life Sciences. 59-70

Managing and Designing Scientific Workflows

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  Thodoros Topaloglou, Moyez Dharsee, Rob M. Ewing, Yury V. Bukhman: A High-Throughput Bioinformatics Platform for Mass Spectrometry-Based Proteomics. 71-88
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  Lucas Zamboulis, Nigel J. Martin, Alexandra Poulovassilis: Bioinformatics Service Reconciliation by Heterogeneous Schema Transformation. 89-104
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  Jan Hidders, Natalia Kwasnikowska, Jacek Sroka, Jerzy Tyszkiewicz, Jan Van den Bussche: A Formal Model of Dataflow Repositories. 105-121
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  Shawn Bowers, Timothy M. McPhillips, Martin Wu, Bertram Ludäscher: Project Histories: Managing Data Provenance Across Collection-Oriented Scientific Workflow Runs. 122-138

Mapping and Matching Techniques

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  Björn Egert, Steffen Neumann, Alexander Hinneburg: Fast Approximate Duplicate Detection for 2D-NMR Spectra. 139-155
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  Alexey Tsymbal, Sonja Zillner, Martin Huber: Ontology - Supported Machine Learning and Decision Support in Biomedicine. 156-171
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  Toralf Kirsten, Andreas Thor, Erhard Rahm: Instance-Based Matching of Large Life Science Ontologies. 172-187

Modeling of Life Science Data

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  Jonathan Schug, Max Mintz, Christian J. Stoeckert Jr.: Data Integration and Pattern-Finding in Biological Sequence with TESS's Annotation Grammar and Extraction Language (AnGEL). 188-203
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  Yu Zhang, Zhidong Deng, Hongshan Jiang, Peifa Jia: Inferring Gene Regulatory Networks from Multiple Data Sources Via a Dynamic Bayesian Network with Structural EM. 204-214
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  Paolo Missier, Suzanne M. Embury, Cornelia Hedeler, R. Mark Greenwood, Joanne Pennock, Andy Brass: Accelerating Disease Gene Identification Through Integrated SNP Data Analysis. 215-230

Annotation in Data Integration

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  Philipp Hussels, Silke Trißl, Ulf Leser: What's New? What's Certain? - Scoring Search Results in the Presence of Overlapping Data Sources. 231-246
• 
  Woei-Jyh Lee, Louiqa Raschid, Padmini Srinivasan, Nigam Shah, Daniel L. Rubin, Natasha Fridman Noy: Using Annotations from Controlled Vocabularies to Find Meaningful Associations. 247-263
• 
  Lawrence H. Reeve, Hyoil Han: CONANN: An Online Biomedical Concept Annotator. 264-279

last updated on Sat May 18 04:50:41 2013 by the dblp team
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