Systems Biology

• 
  Gihan Dawelbait, Christian Pilarsky, Yanju Zhang, Robert Grützmann, Michael Schroeder: Structural Protein Interactions Predict Kinase-Inhibitor Interactions in Upregulated Pancreas Tumour Genes Expression Data. 1-11
• 
  Eleftherios Panteris, Stephen Swift, Annette M. Payne, Xiaohui Liu: Biochemical Pathway Analysis via Signature Mining. 12-23
• 
  Ioannis A. Maraziotis, Andrei Dragomir, Anastasios Bezerianos: Recurrent Neuro-fuzzy Network Models for Reverse Engineering Gene Regulatory Interactions. 24-34

Data Analysis and Integration

• 
  Alexandre Urzhumtsev, Natalia Lunina, Pavel V. Afonine, Vladimir Y. Lunin: Some Applications of Dummy Point Scatterers for Phasing in Macromolecular X-Ray Crystallography. 35-45
• 
  Malika Smaïl-Tabbone, Shazia Osman, Nizar Messai, Amedeo Napoli, Marie-Dominique Devignes: BioRegistry: A Structured Metadata Repository for Bioinformatic Databases. 46-56
• 
  Marcus Weber, Susanna Kube: Robust Perron Cluster Analysis for Various Applications in Computational Life Science. 57-66

Structural Biology

• 
  Evgeny B. Krissinel, Kim Henrick: Multiple Alignment of Protein Structures in Three Dimensions. 67-78
• 
  Constantin Bannert, Jens Stoye: Protein Annotation by Secondary Structure Based Alignments (PASSTA). 79-90
• 
  Alexandra Shulman-Peleg, Maxim Shatsky, Ruth Nussinov, Haim J. Wolfson: MAPPIS: Multiple 3D Alignment of Protein-Protein Interfaces. 91-103

Genomics

• 
  Jeannette M. de Graaf, Renée X. de Menezes, Judith M. Boer, Walter A. Kosters: Frequent Itemsets for Genomic Profiling. 104-116
• 
  Defeng Wang, Daniel S. Yeung, Eric C. C. Tsang, Lin Shi: Gene Selection Through Sensitivity Analysis of Support Vector Machines. 117-127
• 
  Robert Brijder, Hendrik Jan Hoogeboom, Grzegorz Rozenberg: The Breakpoint Graph in Ciliates. 128-139

Computational Proteomics

• 
  Andreas Quandt, Alexander Ploner, Chuen Seng Tan, Janne Lehtiö, Yudi Pawitan: ProSpect: An R Package for Analyzing SELDI Measurements Identifying Protein Biomarkers. 140-150
• 
  Clemens Gröpl, Eva Lange, Knut Reinert, Oliver Kohlbacher, Marc Sturm, Christian G. Huber, Bettina M. Mayr, Christoph L. Klein: Algorithms for the Automated Absolute Quantification of Diagnostic Markers in Complex Proteomics Samples. 151-162
• 
  Evgeny B. Krissinel, Kim Henrick: Detection of Protein Assemblies in Crystals. 163-174

Molecular Informatics

• 
  Andreas Bender, Andreas Klamt, Karin Wichmann, Michael Thormann, Robert C. Glen: Molecular Similarity Searching Using COSMO Screening Charges (COSMO/3PP). 175-185
• 
  B. Fischer, Holger Merlitz, Wolfgang Wenzel: Increasing Diversity in In-silico Screening with Target Flexibility. 186-197
• 
  Daniel Baum: Multiple Semi-flexible 3D Superposition of Drug-Sized Molecules. 198-207

Molecular Structure Determination and Simulation

• 
  Polina V. Banushkina, Olaf Schenk, Markus Meuwly: Efficiency Considerations in Solving Smoluchowski Equations for Rough Potentials. 208-216
• 
  Markus Bauer, Gunnar W. Klau, Knut Reinert: Fast and Accurate Structural RNA Alignment by Progressive Lagrangian Optimization. 217-228
• 
  Johannes Schmidt-Ehrenberg, Hans-Christian Hege: Visual Analysis of Molecular Conformations by Means of a Dynamic Density Mixture Model. 229-240

Distributed Data Mining

• 
  Micha Bayer, Richard O. Sinnott: Distributed BLAST in a Grid Computing Context. 241-252
• 
  Tatjana Eitrich, Bruno Lang: Parallel Tuning of Support Vector Machine Learning Parameters for Large and Unbalanced Data Sets. 253-264
• 
  Emad Ramadan, Christopher Osgood, Alex Pothen: The Architecture of a Proteomic Network in the Yeast. 265-276

last updated on Wed May 22 02:48:43 2013 by the dblp team
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