BIOSTEC BIOINFORMATICS 2011:
Rome,
Italy
Marco Pellegrini, Ana L. N. Fred, Joaquim Filipe, Hugo Gamboa (Eds.):
BIOINFORMATICS 2011 - Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms, Rome, Italy, 26-29 January, 2011.
SciTePress 2011, ISBN 978-989-8425-36-2 
Full Papers
- Monther Alhamdoosh, Castrense Savojardo, Piero Fariselli, Rita Casadio:
Disulfide Connectivity Prediction with Extreme Learning Machines.
5-14
- Virginio Cantoni, Riccardo Gatti, Luca Lombardi:
Morphological Analysis of 3D Proteins Structure.
15-21
- Jan Schier, Bohumil Kovár:
Automated Counting of Yeast Colonies using the Fast Radial Transform Algorithm.
22-27
- Esa Pitkänen, Juho Rousu, Mikko Arvas:
Minimum Mutation Algorithm for Gapless Metabolic Network Evolution.
28-38
- Luna Dimitrio, Roberto Natalini, Luciano Milanesi:
A Mathematical Model for the Enhanced Cytoplasmic Transport - How to Get (Faster) to the Nucleus.
39-46
- Gabriel Synnaeve, Katsumi Inoue, Andrei Doncescu, Hidetomo Nabeshima, Yoshitaka Kameya, Masakazu Ishihata, Taisuke Sato:
Kinetic Models and Qualitative Abstraction for Relational Learning in Systems Biology.
47-54
- Guido Dell'Acqua, Alberto Maria Bersani:
Bistability and the Complex Depletion Paradox in the Double Phosphorylation-dephosphorylation Cycle.
55-65
- Francesco Abate, Andrea Acquaviva, Elisa Ficarra, Enrico Macii:
A New Latent Semantic Analysis based Methodology for Knowledge Extraction from Biomedical Literature and Biological Pathways Databases.
66-74
- Na'el Abu-halaweh, Amit Sabnis, Robert W. Harrison:
Prediction of Regulatory sRNAs in Prokaryotes using Machine Learning Tools.
75-81
- Kalle Karhu, Juho Mäkinen, Jussi Rautio, Jorma Tarhio, Hugh Salamon:
GAST, a Genomic Alignment Search Tool.
82-90
Short Papers
- Majid Masso, Iosif I. Vaisman:
Modeling Cell Proliferation Activity of Human Interleukin-3 upon Single Residue Replacements.
93-101
- Michaël Vyverman, Joachim M. De Schrijver, Wim Van Criekinge, Peter Dawyndt, Veerle Fack:
Accurate Long Read Mapping using Enhanced Suffix Arrays.
102-107
- Hunter N. B. Moseley, Richard M. Higashi, Teresa W.-M. Fan, Andrew N. Lane:
Metabolic Modeling of Converging Metabolic Pathways - Analysis of Non-steady State Stable Isotope-resolve Metabolism of UDP-GlcNAc and UDP-GalNAc.
108-115
- Mario Salerno, Gianluca Susi, Alessandro Cristini:
Accurate Latency Characterization for Very Large Asynchronous Spiking Neural Networks.
116-124
- Jyh-Jong Tsay, Bo-Liang Wu, Hou-Ji Dai:
BioDBLink: Multi-level Data Matching for Automatic Generation of Cross Links among Biochemical Pathway Databases.
125-130
- Giulia Menconi, Giovanni Battaglia, Roberto Grossi, Nadia Pisanti, Roberto Marangoni:
Inferring Mobile Elements in S. Cerevisiae Strains.
131-136
- Maria José Villanueva, Francisco Valverde, Oscar Pastor:
Applying Conceptual Modeling to Alignment Tools One Step towards the Automation of DNA Sequence Analysis.
137-142
- Leonor Rib, Ricard Gavaldà, José Manuel Soria, Alfonso Buil:
SalaboMiner - A Biomedical Literature Mining Tool for Inferring the Genetics of Complex Diseases.
143-148
- Anna Gambin, Slawomir Lasota, Michal Startek, Maciej Sykulski, Laurent Noé, Gregory Kucherov:
Subset Seed Extension to Protein BLAST.
149-158
- Lyamine Hedjazi, Marie-Véronique Le Lann, Tatiana Kempowsky-Hamon, F. Dalenc, G. Favre:
Improved Breast Cancer Prognosis based on a Hybrid Marker Selection Approach.
159-164
- Manuel de la Sen, Santiago Alonso-Quesada, Asier Ibeas:
On Vaccination Controls for the SEIR Epidemic Model with Susceptible plus Immune Populations Tracking the Whole Population.
165-172
- Tomasz Gambin, Pawel Stankiewicz, Maciej Sykulski, Anna Gambin:
Robustness of Exon CGH Array Designs.
173-182
- Anna Marabotti, Corrado Cirielli, Daniela Agnese D'Arcangelo, Claudia Giampietri, Francesco Facchiano, Antonio Facchiano, Angelo M. Facchiano:
A Computational Strategy to Investigate Relevant Similarities between Virus and Human Proteins - Local High Similarities between Herpes and Human Proteins.
183-188
- Bráulio Roberto Gonçalves Marinho Couto, Marcelo Matos Santoro, Marcos Augusto dos Santos:
Singular Value Decomposition (SVD) and BLAST - Quite Different Methods Achieving Similar Results.
189-195
- Gaurav Thareja, Vivek Kumar, Mike Zyskowski, Simon Mercer, Bob Davidson:
PadeNA: A Parallel De Novo Assembler.
196-203
- Virginio Cantoni, Alessandro Gaggia, Riccardo Gatti, Luca Lombardi:
Geometrical Constraints for Ligand Positioning.
204-209
- Stefan Sokoll, Klaus D. Tönnies, Martin Heine:
Towards Fast 3D Nanoparticle Localization for Studying Molecular Dynamics in Living Cells.
210-215
- Matina Lakka, A. Desarti, Grigorios Chrysos, Euripides Sotiriades, Ioannis Papaefstathiou, Apostolos Dollas:
Reconfigurable Computing IP Cores for Multiple Sequence Alignment.
216-221
- A. Tsouknidas, N. Michailidis, S. Savvakis, K. Anagnostidis, K.-D. Bouzakis, G. Kapetanos:
A High Accuracy CT based FEM Model of the Lumbar Spine to Determine its Biomechanical Response.
222-227
- Egon L. van den Broek, Theo E. Schouten:
Modeling Internal Radiation Therapy.
228-233
- Munib Ahmed, Ishfaq Ahmad, Samee Khan:
A Theoretical Analysis of Scalability of the Parallel Genome Assembly Algorithms.
234-237
- Petr Simecek, Maria Dzur-Gejdosova, Irena Chvatalova, Jirí Forejt:
Litter Effect in Mouse Phenotypic Studies.
238-243
- Corrado Giannantoni:
Bio-informatics in the Light of the Maximum Ordinality Principle - The Case of Duchenne Muscular Dystrophy.
244-250
Posters
- Daniel Cadete, António dos Anjos, Hamid Shahbazkia, Richard Christen:
CUDA Performance in DNA Analysis - Analysis of Cuda Architecture Performance in DNA Analysis.
253-257
- Evgeny O. Puchkov:
Image Analysis Combined Fluorescence Microscopy - Examples of ImageJ Software Application in Yeast Studies.
258-261
- Lili Pei, Shujia Qin, Wei Ding, Lei Miao, Hongyi Li:
Chaos Level Investigation of Centre-of-pressure Single-step Displacement in Static and Dynamic Visual Conditions.
262-265
- Matthijs van der Kroon, Ignacio Lereu Ramirez, Ana M. Levin, Oscar Pastor, Sjaak Brinkkemper:
Mutational Data Loading Routines for Human Genome Databases - The BRCA1 Case.
266-269
- Rafal Wcislo:
Interactive Visualization Tool for Tumor Growth Simulations.
270-273
- Charalampos S. Kouzinopoulos, Panagiotis D. Michailidis, Konstantinos G. Margaritis:
Experimental Results on Multiple Pattern Matching Algorithms for Biological Sequences.
274-277
- Jaroslav Albert, Marianne Rooman:
Modeling Delays in State Transition of a Bistable Genetic Switch under the Influence of Extrinsic Noise.
278-282
- Hang Zettervall, Elisabeth Rakus-Andersson, Henrik Forssell:
The Mamdani Controller in Prediction of the Survival Length in Elderly Gastric Patients.
283-286
- Badia Dandach-Bouaoudat, Farouk Yalaoui, Lionel Amodeo, Françoise Entzmann:
Optimization of a Solid State Fermentation based on Radial Basis Function Neural Network and Particle Swarm Optimization Algorithm.
287-292
- Alberto Calvi, Pietro Lovato, Simone Marchesini, Barbara Oliboni, Massimo Delledonne, Alberto Ferrarini:
Microarray System - A System for Managing Data Produced by DNA-microarray Experiments.
293-296
- José C. Calvo, Julio Ortega, Mancia Anguita, Javid Taheri, Albert Y. Zomaya:
A Method to Improve the Accuracy of Protein Torsion Angles.
297-300
- James T. Murphy, Ray Walshe, Marc Devocelle:
A Computational Modelling Approach to Explore the Anti-microbial Pro-drug Delivery System.
301-308
- András Hartmann, Susana Vinga, João M. Lemos:
Unified Modeling of Several Perturbation Experiments in Systems Biology - A Case Study on the Glucose Uptake of Lactococcus Lactis.
309-312
- Bráulio Roberto Gonçalves Marinho Couto, Marcelo Matos Santoro, Marcos Augusto dos Santos:
Unrevealing Biological Process with Linear Algebra - Extracting Patterns from Noisy Data.
313-317
- Giulia Paciello, Andrea Acquaviva, Elisa Ficarra, M. A. Deriu, A. Grosso, Enrico Macii:
Binding Free Energy Calculation via Molecular Dynamics Simulations for a miRNA: mRNA Interaction.
318-321
- Juan Pablo Costa, Horacio Castellini, Patricia Risso, Bibiana Riquelme:
Texture Analysis of Milk Protein Gels using Digital Image Analysis.
322-325
- Sion Hannuna, Timo Kunkel, Nantheera Anantrasirichai, Nishan Canagarajah:
Colour Correction for Assessing Plant Pathology using Low Quality Cameras.
326-331
Special Session on Metagenomic Sequence Data Analysis
Full Papers
Short Papers
Last update Tue May 22 23:23:09 2012
CET by the DBLP Team — 
Data released under the ODC-BY 1.0 license — See also our legal information page
