BICoB 2011:
New Orleans,
Louisiana,
USA
Hisham Al-Mubaid (Ed.):
Proceedings of the ISCA 3rd International Conference on Bioinformatics and Computational Biology, BICoB-2011, March 23-25, 2011, Holiday Inn Downtown-Superdome, New Orleans, Louisiana, USA.
ISCA 2011, ISBN 978-1-880843-81-9 
Gene and Protein
- Colin Kern, Li Liao, K. Vijay-Shanker:
Improving Transmembrane Protein Prediction by Increasing the Utilization of Local Information.
1-6
- Nashat Mansour, Iman Ghalayini, Sandra Rizk, Mirvat El-Sibai:
Evolutionary Algorithm for Predicting All-Atom Protein Structure.
7-12
- Jing Tian, Guiling Sun, Qin Ding, Jinling Huang, Shravanth Oruganti, Boya Xie:
AlienG: An Effective Computational Tool for Phylogenomic Identification of Horizontally Transferred Genes.
13-18
Microarray Research and Applications
Disease and Drug
Biological and Regulatory Networks
- Tejaswini Narayanan, Shankar Subramaniam:
Community Detection in Biological Networks using a Variational Bayes Approach.
61-66
- Johannes Georg Klotz, Steffen Schober, Martin Bossert:
On the Predecessor Problem in Boolean Network Models of Regulatory Networks.
67-73
- Vijender Chaitankar, Preetam Ghosh, Mohamed O. Elasri, Edward J. Perkins:
A Scalable Information Theory Based Gene Regulatory Network Inference Method from Time Series and Knock-Out Data.
74-79
- Henry Chi-Ming Leung, Shuen-Yi Leung, Carlos Lu Xiang, Siu-Ming Yiu, Francis Yuk-Lun Chin:
DMPFinder - Finding Differentiating Pathways with Gaps from Two Groups of Metabolic Networks.
80-85
Machine Learning in Bioinformatics
Petri Nets Modeling
Bioinformatics Applications
Data Mining Applications in Bioinformatics
DNA and RNA
- Pragyan P. Mohanty, Spyros Tragoudas:
A Scalable Method for Identifying DNA Substrings Using Functions.
178-183
- Sheng Li, Huzefa Rangwala:
An Information Theoretic Approach for the Analysis of RNA and DNA Binding Sites.
184-189
- Nuttachat Wisittipanit, Huzefa Rangwala, Masoumeh Sikaroodi, Ali Keshavarzian, Ece A. Mutlu, Patrick Gillevet:
Profiling Microbial Communities using SSU rRNA Sequence and LH-PCR Data.
190-195
- Joseph R. Coco, Erik K. Flemington, Christopher M. Taylor:
PARSES: A Pipeline for Analysis of RNA-Seq Exogenous Sequences.
196-200
- Marzieh Khodaee, Vahid Hashemi, Mohammad Aminisharifabad:
A Simple Algorithm for Solving the All-Pairs Minimum Value Cut Problem Using DNA Computing.
201-204
Data Analysis and Modeling - I
- Ashwin Manjunatha, Paul Anderson, Ajith Ranabahu, Amit P. Sheth:
Identifying and Implementing the Underlying Operators for Nuclear Magnetic Resonance based Metabolomics Data Analysis.
205-210
- Juliana C. Correa, Gabriel P. Silva:
Parallel BLAST Analysis and Performance Evaluation.
211-218
- James D. Jackson, Philip J. Hatcher:
Efficient Parallel Execution of Sequence Similarity Analysis Via Dynamic Load Balancing.
219-224
- Stephen Winters-Hilt:
Single Nucleotide Polymorphism Detection via Cheminformatics Analysis of Nanopore-Blockades Engineered for Event Transduction.
225-232
- Aysegul Ozkan, Meera Sitharam:
EASAL (Efficient Atlasing, Analysis and Search of Molecular Assembly Landscapes).
233-238
- Kris Sankaran, Siva Sankaran:
A Hidden Markov Model Approach to Identifying Novel Functional Modules.
239-244
- Haijun Gong, Qinsi Wang, Paolo Zuliani, James R. Faeder, Michael Lotze:
Symbolic Model Checking of Signaling Pathways in Pancreatic Cancer.
245-
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