5. APBC 2007: Hong Kong, China
David Sankoff, Lusheng Wang, Francis Y. L. Chin (Eds.): Proceedings of 5th Asia-Pacific Bioinformatics Conference, APBC 2007, 15-17 January 2007, Hong Kong, China. Imperial College Press 2007 Advances in Bioinformatics and Computational Biology ISBN 978-1-86094-783-4
Jennifer A. Marshall Graves: Exploring Genomes of Distantly Related Mammals. 1
Joseph H. Nadeau: Bugs, Guts and Fat - A Systems Approach to the Metabolic 'Axis of Evil'. 3
Pavel A. Pevzner: Protein Identification via Spectral Networks Analysis. 5
Daniel H. Huson, Alexander F. Auch, Qi Ji, Stephan C. Schuster: etagenome Analysis using Megan. 7-16
Qi Fu, Elizabeth Bent, James Borneman, Marek Chrobak, Neal E. Young: Algorithmic Approaches to Selecting Control Clones in DNA Array Hybridization Experiments. 17-26
Xudong Xie, Shuanhu Wu, Kin-Man Lam, Hong Yan: An Effective Promoter Detection Method using the Adaboost Algorithm. 37-46
Hongya Zhao, Alan Wee-Chung Liew, Hong Yan: A New Strategy of Geometrical Biclustering for Microarray Data Analysis. 47-56
V. Choi, Y. Huang, Vy Lam, D. Potter, Reinhard C. Laubenbacher, Karen Duca: Using Formal Concept Analysis for Microarray Data Comparison. 57-66
Sara C. Madeira, Arlindo L. Oliveira: An Efficient Biclustering Algorithm for Finding Genes with Similar Patterns in Time-series Expression Data. 67-80
Zhipeng Cai, Randy Goebel, Mohammad R. Salavatipour, Yi Shi, Lizhe Xu, Guohui Lin: Selecting Genes with Dissimilar Discrimination Strength for Sample Class Prediction. 81-90
Martin Stig Stissing, Thomas Mailund, Christian N. S. Pedersen, Gerth Stølting Brodal, Rolf Fagerberg: Computing the All-Pairs Quartet Distance on a Set of Evolutionary Trees. 91-100
Martin Stig Stissing, Christian N. S. Pedersen, Thomas Mailund, Gerth Stølting Brodal, Rolf Fagerberg: Computing the Quartet Distance Between Evolutionary Trees of Bounded Degree. 101-110
Pinghao Wang, Bing Bing Zhou, Monther Tarawneh, Daniel Chu, Chen Wang, Albert Y. Zomaya, Richard P. Brent: A Global Maximum Likelihood Super-Quartet Phylogeny Method. 111-120
Seung-Jin Sul, Tiffani L. Williams: A Randomized Algorithm for Comparing Sets of Phylogenetic Trees. 121-130
Minghui Jiang, Ying Xu, Binhai Zhu: Protein Structure-Structure Alignment with Discrete Fr'echet Distance. 131-141
Yonggang Lu, Jing He, Charlie E. M. Strauss: Deriving Protein Structure Topology from the Helix Skeletion in Low Resolution Density Map using Rosetta. 143-151
Tatsuya Akutsu, Daiji Fukagawa: Inferring a Chemical Structure from a Feature Vector Based on Frequency of Labeled Paths and Small Fragments. 165-174
Gaofeng Huang, Peter Jeavons, Dominic Kwiatkowski: Exact and Heuristic Approaches for Identifying Disease-Associated SNP Motifs. 175-184
Young Ju Suh, Wentian Li: Genotype-Based Case-Control Analysis, Violation of Hardy-Weinberg Equilibrium, and Phase Diagrams. 185-194
B. C. Easton, A. V. Isaev, Gavin A. Huttley, Peter Maxwell: A Probabilistic Method to Identify Compensatory Substitutions for Pathogenic Mutations. 195-204
Mahdi Belcaid, Anne Bergeron, Annie Chateau, Cedric Chauve, Yannick Gingras, Guylaine Poisson, M. Vendette: Exploring Genome Rearrangements using Virtual Hybridization. 205-214
Narayanan Raghupathy, Rose Hoberman, Dannie Durand: Two Plus Two Does not Equal Three: Statistical Tests for Multiple Genome Comparison. 215-225
Wei Xu: The Distance Between Randomly Constructed Genomes. 227-236
Jochen Supper, Holger Fröhlich, Christian Spieth, Andreas Dräger, Andreas Zell: Inferring Gene Regulatory Networks by Machine Learning Methods. 247-256
Morihiro Hayashida, Tatsuya Akutsu, Hiroshi Nagamochi: A Novel Clustering Method for Analysis of Biological Networks using Maximal Components of Graphs. 257-266
Jochen Supper, Holger Fröhlich, Andreas Zell: Gene Regulatory Network Inference via Regression Based Topological Refinement. 267-276
Falk Hüffner, Sebastian Wernicke, Thomas Zichner: Algorithm Engineering for Color-Coding to Facilitate Signaling Pathway Detection. 277-286
Kang Ning, Ket Fah Chong, Hon Wai Leong: De Novo Peptide Sequencing for Mass Spectra Based on Multi-Charge Strong Tags. 287-296
Baozhen Shan, Bin Ma, Kaizhong Zhang, Gilles Lajoie: Complexities and Algorithms for Glycan Structure Sequencing using Tandem Mass Spectrometry. 297-306
Shilin Ding, Minlie Huang, Xiaoyan Zhu: Semi-supervised Pattern Learning for Extracting Relations from Bioscience Texts. 307-316
Kinya Okada, Kiyoshi Asai, Masanori Arita: Flow Model of the Protein-protein Interaction Network for Finding Credible Interactions. 317-326
Denise Y. F. Mak, Gary Benson: All Hits All The Time: Parameter Free Calculation of Seed Sensitivity. 327-340
Sung-Hee Park, David Gilbert, Keun Ho Ryu: Fast Structural Similarity Search Based on Topology String Matching. 341-351
Sebastian Wernicke, Florian Rasche: Simple and Fast Alignment of Metabolic Pathways by Exploiting Local Diversity. 353-362
Betty Yee Man Cheng, Jaime G. Carbonell: Combining N-grams and Alignment in G-protein Coupling Specificity Prediction. 363-372



